Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01829 ATGAGTCAGGACAAAAGTAGAGAATTCCTGCATTCTGGAAACGACAAAGACAAATTCAAGGCAACTCTTCTTCAGCAAGTGGACGATCTGCTGAAAAATATTTTTGATCATTTGAGATCTGCCAATGCACTTGTTGATGACTTGGAGTCCACCATACGACCTGTAGAGAAGGAACTGAATGAGCTGCGAGGAAAAATTAAAAACATGGAGCAGGTAGAAGAAATCTCTCAACAAGTTCAACAATTAAAGAAAAAGCTTGCTTGGTCATGGGTATATGATGTAGACAAGCAGCTTCAGGAGCAAAGTGCAAAAATAGGAAAGCTCCAAGATCGCATTCCTATTTGTCGAGCAAAAATTGATCATCAGCTGGGTCTGGCGGAAAAATTAAGGGAACGCTATATTGAGAAAAAAACTCAAATCGCAAGCATGATGGAGAGAACTTCAGAAGTGAGAAGAATGAAGGATGAACTGCAGGAAACTCTTACCTTGGCAACAAGAGAGAAGCTCGGACTTGAAGAGGAGCATGGTCGTAAAATAAACTACATCCAAAAGATGGCAAAGCGTGTTAGGCTGCTTGAGCAACAAGTTCAAGATATTCATGAGCAGCACATAAGAAATACCCAGGCTGAAGAATCTGAAATTGAGGAAAAGTTGAAGGAACTCGAATTGGAGACTGAAGCTGCTAAGTCAACAGTAATGAGAAAGGACTGCATAGTATCTTATTTAATCAACAGGTTGAAAGATGAGGAGAATGCCTTGATGGAAAGTCTGTACAGTGGGAGAAATGAAATAAAAAAGATTGCCGAAGAGATTGCAAGTTACGAGAAAAAAGCCTATGAATTTTCTCACTCAATTCAAGAGCTCAAGCAGCATCAAACCAACAAGGTCACAGCTTTTGGAGGTGACAAAGTCATTCAATTATTACGTGCAATTGAGAGGCACCATCAAAGGTTCAAGAAACCTCCCATTGGTCCAATTGGTTCCCATCTGTCATTATCATATGGATTGGCTTCTTTGATAATCAACGTGTTTCAGATTTGGTGTGCTACCGAGGTTCTTTTGTCTCCGGGAGATTGTTCTTTCCGGTGGCAGCAGCTTAGTACTAATTTGGTCAATGGTGACATGTGGGCTCCTGCTGTTGAAATTGCCATTGGGAGGTTGCTCAATGCTTTCATCGTGACTGATCACCAAGATTCTCTTCTTTTGAGAAGATGTGCAAATGAAGCTAATTATAGGCAACTCCCAATTGTCATCTATGACTTTTCAAGACCAGTGTTAAATATTCCAGCTCACATGCTTCCTCAAACAAAGCATCCTACAACCCTTTCTGTCATTCATTCTGAAAACCATACTGTCGTCAATGTTTTGATAGATAAGGGTGATGCTGAGAGGCAAGTACTTGTTAAAGATTATAATGTGGGTAAATCAGTTGCATTTGACCAACGGATCTCAAATCTCAAGGAGGTCTTTACATTAGATGGATACAAAATGTTTTCACGTGGTTCTGTTCAGACAATTCTTCCTCCAGTTAGAAAACCCAGAAGTGGCAGACTTTGTAGCTCCTTTGACGACCAAATTAAAAGTCTTGAAAAAGATGCATTGAATGTAAAGCAAGAAGCTGAACAATGTAGGAAGAGGAAGAGAGCTTCAGAAGAACAACTCCGGGATCTTGAAGACAACCTAAATAATGCGAAGAGGAGGTGTCGGAGTGCAGAACGGTCTTTAATGTCCAAAAATTTGGAGCTGCAAGATTTACGAAAGTCACAAGTTGCTGAAACTAGTTCAGTACCTTCATCAAATGTGGATGAGCTACACCAAGAAATTTCTAAAATTGAAGAGGAGATACAAGAGAATAAGATGCTTCTCGAAAAGTTTAAAGTTAGGATGAAAGAAGCGGAGGCAAAGGCAAAAGATCTTAAAGTATCATTTGAAAATCTGTGTGAGTCAGCAAAAGGAGAAATTGATGCATTTGAAGAAGCTGAGAGAGATATGTTGGAGCTTGAAAGAAAATTGCATTCTGCAGAAAAGGAGAAGGATCATTATGAAAGTATTATGACTAATAAGGTCCTTTTTGATATTAAAGAGGCAGAGAGACAACATCAGGAGCTTGAGCGTCATCGTAAGGAGAGTTACAATAAGGCTTCAATAATATGTCCTGAGAGTGAAATTGAGGCTTTAGGTGATTGGGATGGGAGCACACCCGAACAACTCAGTGCACAATTAACAAGGCTAAATCAGAGACTTAATAACGAGACCAGAAGATGTTCTGAATCTTTGGAAGACCTGAGGATGATGTATGAGAAAAAGGAGCGCACAATTATAAGAAAACAACTGACTTATAAAAGTTTTAGAGAGAAGTTGGATGCTTGCCAGAAAGCTCTTCAGCTACGGCGGAACAAGTTTGAAAGGAATGCTAGTCTTTTGAAGCGCCAATTGACTTGGCAATTTAATGGCCATTTAAGAAAAAAAGGGATCAGCGGACATATAAAAGTTAATTATGAGGAAAAGACCCTCTCAGTTGAGGTGAAGATGCCCCAGGATGCATCCAGCAGTTCTGTTCGTGATACCCGTGGACTTTCAGGCGGAGAACGATCATTTTCGACTCTATGCTTTGCTTTGGCATTACACGAGATGACAGAAGCCCCATTTCGAGCAATGGATGAGTTTGATGTGTTTATGGATGCAGTAAGTCGGAAAATTAGCTTAGACACTCTTGTGGATTTTGCATTGGCACAAGGCTCCCAATGGATTTTTATCACGCCTCATGACATCGGGATGGTAAAACAAGGAGAAAGAATCAAGAAGCAACAAATGGCAGCTCCTCGATCATGA 2832 40.22 MSQDKSREFLHSGNDKDKFKATLLQQVDDLLKNIFDHLRSANALVDDLESTIRPVEKELNELRGKIKNMEQVEEISQQVQQLKKKLAWSWVYDVDKQLQEQSAKIGKLQDRIPICRAKIDHQLGLAEKLRERYIEKKTQIASMMERTSEVRRMKDELQETLTLATREKLGLEEEHGRKINYIQKMAKRVRLLEQQVQDIHEQHIRNTQAEESEIEEKLKELELETEAAKSTVMRKDCIVSYLINRLKDEENALMESLYSGRNEIKKIAEEIASYEKKAYEFSHSIQELKQHQTNKVTAFGGDKVIQLLRAIERHHQRFKKPPIGPIGSHLSLSYGLASLIINVFQIWCATEVLLSPGDCSFRWQQLSTNLVNGDMWAPAVEIAIGRLLNAFIVTDHQDSLLLRRCANEANYRQLPIVIYDFSRPVLNIPAHMLPQTKHPTTLSVIHSENHTVVNVLIDKGDAERQVLVKDYNVGKSVAFDQRISNLKEVFTLDGYKMFSRGSVQTILPPVRKPRSGRLCSSFDDQIKSLEKDALNVKQEAEQCRKRKRASEEQLRDLEDNLNNAKRRCRSAERSLMSKNLELQDLRKSQVAETSSVPSSNVDELHQEISKIEEEIQENKMLLEKFKVRMKEAEAKAKDLKVSFENLCESAKGEIDAFEEAERDMLELERKLHSAEKEKDHYESIMTNKVLFDIKEAERQHQELERHRKESYNKASIICPESEIEALGDWDGSTPEQLSAQLTRLNQRLNNETRRCSESLEDLRMMYEKKERTIIRKQLTYKSFREKLDACQKALQLRRNKFERNASLLKRQLTWQFNGHLRKKGISGHIKVNYEEKTLSVEVKMPQDASSSSVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQWIFITPHDIGMVKQGERIKKQQMAAPRS 943
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 23756301 23777000 + MELO3C017663.2.1 Cme07g01829 333845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01829 943 Coils Coil 741 761 - -
Cme07g01829 943 Gene3D - 519 689 - -
Cme07g01829 943 Coils Coil 154 174 - -
Cme07g01829 943 Coils Coil 182 202 - -
Cme07g01829 943 Coils Coil 693 713 - -
Cme07g01829 943 Coils Coil 126 146 - -
Cme07g01829 943 Coils Coil 45 85 - -
Cme07g01829 943 CDD ABC_SMC6_euk 847 943 - -
Cme07g01829 943 Gene3D - 18 114 - -
Cme07g01829 943 Gene3D - 693 938 IPR027417 -
Cme07g01829 943 Coils Coil 791 811 - -
Cme07g01829 943 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 830 932 IPR027417 -
Cme07g01829 943 Coils Coil 526 588 - -
Cme07g01829 943 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 1 335 - -
Cme07g01829 943 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 369 943 - -
Cme07g01829 943 Pfam RecF/RecN/SMC N terminal domain 200 935 IPR003395 -
Cme07g01829 943 Coils Coil 601 684 - -
Cme07g01829 943 Coils Coil 204 231 - -
Cme07g01829 943 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B 1 335 IPR027132 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Cme07g01829 943 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B 369 943 IPR027132 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01829 K22804 - csv:101208493 1634.77