Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01841 ATGCGTTGCCCAAACCCAAAAGAATCCCCAAATCCAATTCGTATATATAAATCCCCTAAATCCTCTCCTTCCCAATTCACTTTCATGAAATTTTCACCTTCTCCCTTTTTCAAATCCCCCGCCATTACTGTTTCTCCCAAATTCTCCTTCTCCATCGCCTCCGCCGCCATGTCCTCTTCCGATCACTCTCCCCCTGCCTTCGACCGTCCTCGCTCCGTCATCAAAAAGATTCTCGCTAAACTCCAACACGAAGGTGACGGCGCTGTCGTTCGTCGCGGCATCGGAAGGAATGATTTAAAGAATCTAGATCCGTTTCTTATGCTCGATGATTTCTCCGTCAGTCCGCCTGCTGGATTTCCCGATCATCCTCACAGAGGTTTTGAGACAGTGACATATATGTTACAGGGAGGGATTACCCATCAAGATTTTGCTGGCCACAAGGGTACAATCAGAACAGGGGATGTCCAGTGGATGACAGCAGGAAGAGGTATAATTCATTCAGAAATGCCTGCTGGTGAAGGATCTCAAAAGGGTTTGCAACTTTGGATCAATCTAGCATCCCATGACAAAATGATGGAGCCAAGGTATCAGGAGATCTCAAGCGACAACATACCGAGAGCGGAGAAAGACGGAGTGGAAGTTCGTGTGATAGCAGGAGAATCCATGGGAGTTCATTCTCCAATCTACACAAGAACTCCAACTATGTACCTTGACTTCACTTTGAGACCAAGAGCTCAAGTGCATCAAAGCATCCCAGACACATGGACATCTTTCGTGTACATAATCGAGGGGGAAGGTGTGTTCGGGTCGTCAAACTCGTCGCGGGTAGCAGCACACCATGTTCTAGTATTGGGAGGTGGAGATGGGGTAAGTGTGTGGAACAGATCTTCAAAGCCATTGAGATTTGTGTTGATTGCAGGGAAGCCATTGAATGAACCAATAGTTCAATATGGACCATTCGTTATGAACTCACAATCTGAAATTGACCAAGCAATCGAAGACTACCATTATGCTAAAAATGGGTTTGAAATGGCAAAGTATTGGAGATCTCAGTGA 1056 46.02 MRCPNPKESPNPIRIYKSPKSSPSQFTFMKFSPSPFFKSPAITVSPKFSFSIASAAMSSSDHSPPAFDRPRSVIKKILAKLQHEGDGAVVRRGIGRNDLKNLDPFLMLDDFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAGEGSQKGLQLWINLASHDKMMEPRYQEISSDNIPRAEKDGVEVRVIAGESMGVHSPIYTRTPTMYLDFTLRPRAQVHQSIPDTWTSFVYIIEGEGVFGSSNSSRVAAHHVLVLGGGDGVSVWNRSSKPLRFVLIAGKPLNEPIVQYGPFVMNSQSEIDQAIEDYHYAKNGFEMAKYWRSQ 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 23878791 23881494 - MELO3C017671.2.1 Cme07g01841 333857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01841 351 PANTHER PIRIN-RELATED 60 351 IPR012093 -
Cme07g01841 351 PANTHER PIRIN-LIKE PROTEIN 60 351 - -
Cme07g01841 351 SUPERFAMILY RmlC-like cupins 71 349 IPR011051 -
Cme07g01841 351 Pfam Pirin 91 183 IPR003829 -
Cme07g01841 351 CDD cupin_pirin_N 88 185 - -
Cme07g01841 351 Gene3D Jelly Rolls 205 310 IPR014710 -
Cme07g01841 351 Gene3D Jelly Rolls 84 336 IPR014710 -
Cme07g01841 351 CDD cupin_pirin_C 233 309 - -
Cme07g01841 351 Pfam Pirin C-terminal cupin domain 236 340 IPR008778 -
Cme07g01841 351 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00973 Cme-Chr1:11384306 Cme07g01841 Cme-Chr7:23878791 7.78E-151 dispersed
Cme06g02805 Cme-Chr6:35254658 Cme07g01841 Cme-Chr7:23878791 2.35E-107 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01841 K06911 - csv:101205861 613.224