Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g01888 ATGTCTTTGCAAGATTCACTCCCAAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAGGCTGGTCGTGGCCCTGTTTTAGGTCCAATGGTGTATGGATGTTTGTACTGCGCCAGTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGACTCAAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCCAATGAGTCAATTGGATGGGCCGTTGATGTCATTGATCCTCGAGAACTTTCCTCCAAGATGCTAAATAAAGTAAAGATCAACCTAAATGAAATATCACATGGCTCTGCAATGGGTCTGGTCACCAAGGTTCTAAGCATGGGAGTTCTTTTAACCGAGGTTTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGAATCAAGTTGTCTGAAAAATTTCCCAATATAAAATTTGTAGTTGCAAAGAAAGCTGATAGTTTGTATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACAGCTGAAAACATGCATAGAAATTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCTACACTAGTCCGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAGGACGTTGTTGAAGTATCATGGGAGTCGGATAAAGTGGATGAAGATGGTGCAACGGGTGGAAGTGGTAAGAAACAATTAAGATTAAGCAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCCAAAGGACGGTGCAAGTTTTTCCAGGCTAGAAAACTTGAACAACTCTCTCGTTTTTGA 894 41.72 MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 24215626 24218954 - MELO3C017716.2.1 Cme07g01888 333904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g01888 297 SUPERFAMILY Ribonuclease H-like 15 232 IPR012337 -
Cme07g01888 297 TIGRFAM TIGR00729: ribonuclease HII 16 228 IPR004649 GO:0004523|GO:0016070
Cme07g01888 297 CDD RNase_HII_eukaryota_like 17 233 - -
Cme07g01888 297 Gene3D Ribonuclease hii. Domain 2 187 234 IPR023160 GO:0004523
Cme07g01888 297 Pfam Ribonuclease HII 17 227 IPR024567 GO:0004523
Cme07g01888 297 Gene3D - 2 186 IPR036397 GO:0003676
Cme07g01888 297 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 14 236 IPR024567 GO:0004523
Cme07g01888 297 PANTHER RIBONUCLEASE 6 297 - -
Cme07g01888 297 PANTHER RIBONUCLEASE H2 SUBUNIT A 6 297 IPR001352 GO:0003723|GO:0004523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g01888 K10743 - csv:101210143 588.956