Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme07g01926 | ATGGAGAAAAACCCACCCCCAGACAAGTCTGATAGTTTTTCTAAAAATTTCAATAGAAGAATTGCTAATTTGGGCTCACCTCGTCGCACTCTTGACGCCGCCGCCGCCGCTGCTGATGCAAAATCAGATTCCGAAAAGCTTGCTGCCGATAAAGATGATGATGCCTTCATTGAAGAACTTCTTTCCGAATCTGATACCCTATTAATTTTCGAAGAGGTTGATCGATTCCTTGAGACTTTATCCAATGTTGGAGATGATGGATCGAATGTAGTCCATGAAATTCCGAGTTCTGTTCATTCGTTGTCCAAAATGGTGGATTCCATGATCTCTAGATACAGTTCTAATAAATATCCGGCGAAGCTTGGTAAAGATCCCGACAGGGATTCTTACTTTTTCGAAGCATTAGGTCGGATTGCTAAGATTGCGATTAAACTAAGTGAATTCCCTACCAGCGCTGCTTCCATTCCTTCTCTAAATCGGACCACCACGGCTCTACAGCGAGCGATGTCGTTATTGGATGAAGAATTCAGTGCCCTTTTGAAAGAATGCAAACATCGGGAGTTTGATTCTAAATCGGACAAGAAAGCATCTAAGCAATCGTCGTTCAAAACAATGAGCGAATCAACAGATCAACAAAACAGCACCTTTCCTGAATCATCTGAGCCTGATTCTGCTAGGGAAGAGACATTCCCCTCTTTTTCGCAGGAAACTGTATCGAACATGAAAAGAATTGCCGGAACAATGATCTCCGCCGGCTACGAGAAGGAATGTTGTATGAGTTACAGCTTCCTCCGTCAGAGCTCGTTCAAAGGAATACTGAACCAGCTAGGGTATGAAAGTATTAGCATAGACGAGATTCAAAAAATGCAATGGGAAACACTTCAAATGGAAATCGACAAATGGATCGCCGTCGTCAAGAAATGCTCAGAATCTCTGTTCCCAGGTGAGTGGAAGCTTTGTGACTCTGTTTTCACCGATCATCCCTTCATTTCTCATACGTTATTCAGCAATTTAACAAGAGCAGTAGTCATCAAGCTTCTCAACTTCGCAAACGCCGTCGTTTTAACAAAACGGTCAGCGGAGAAGATGTTCAAATTACTTGACATGTACGAAACCATCCGCGATTTAATTCCGACAATCAATGGCTTCCCTGAAAATTGCAGAACAGAGTTAATTTCCGAAGCGGAAGGGGCAAAAAATGGGATAGGCGAAGCAATAGTCGGCATTTTCTACGACCTAGAGAACTCAATCAAAAGTGACAACGCGAAAATTCCCGTTCCAGGAGGAGCAGTTCATCCATTAACACGCTACATAATGAATTACCTAAAATACGCTTGCGAGTACAAAGAAACCCTAGAACAGGTCTTCCAATTTCTCGACCCTAAAGTCGAGGACGACCGACCAGCAAGAATGGACGAGAACGACGACGCATCACCGAGAAAATCCCAACTCGCAATTCAGATCGCAATGGTAATGGAACTACTCGACGCGAATCTCACAATGAGATCAAAACTATACCGCGACCCATCTCTTCGGTACATTTTCCTGATGAACAACGGAAGATACATAGTACAGAAAATCAAAGGGTCATGCGGAATTACGGAGTTGATGGGGGACCGTTGGTGCCGGAAACGATCGACGAATCTGCGACAATACCATAAAAATTACCAGAGAGAAACATGGAGTAAGGTGTTGCAGTGTTTAAGCCACGAAGGATTGCTGGTGAACGGGAAAGTATCGAAGCCGATATTGAAGGAGAGATTCAAAAGCTTTAACGCGATGTTCGATGAAATACACAAAACGCAAAGCAGTTGGGTAGTAAGTGACGAGCAGCTTCAATCGGAGCTTAGGATATCGGTGTCAGCGGTGATGATTCCAGCGTACCGTTCATTCGTAGGGAGATTCAAGCAGCATTTTGATCCAGGAAGACAATCGGAGAAGTACATAAAGTATCAACCTGAAGACATTGAAGGTTTGATCGATGATCTATTTGATGGAAATACTGCGTCTATGGGCAGAAGAAGAATGTAA | 2031 | 43.43 | MEKNPPPDKSDSFSKNFNRRIANLGSPRRTLDAAAAAADAKSDSEKLAADKDDDAFIEELLSESDTLLIFEEVDRFLETLSNVGDDGSNVVHEIPSSVHSLSKMVDSMISRYSSNKYPAKLGKDPDRDSYFFEALGRIAKIAIKLSEFPTSAASIPSLNRTTTALQRAMSLLDEEFSALLKECKHREFDSKSDKKASKQSSFKTMSESTDQQNSTFPESSEPDSAREETFPSFSQETVSNMKRIAGTMISAGYEKECCMSYSFLRQSSFKGILNQLGYESISIDEIQKMQWETLQMEIDKWIAVVKKCSESLFPGEWKLCDSVFTDHPFISHTLFSNLTRAVVIKLLNFANAVVLTKRSAEKMFKLLDMYETIRDLIPTINGFPENCRTELISEAEGAKNGIGEAIVGIFYDLENSIKSDNAKIPVPGGAVHPLTRYIMNYLKYACEYKETLEQVFQFLDPKVEDDRPARMDENDDASPRKSQLAIQIAMVMELLDANLTMRSKLYRDPSLRYIFLMNNGRYIVQKIKGSCGITELMGDRWCRKRSTNLRQYHKNYQRETWSKVLQCLSHEGLLVNGKVSKPILKERFKSFNAMFDEIHKTQSSWVVSDEQLQSELRISVSAVMIPAYRSFVGRFKQHFDPGRQSEKYIKYQPEDIEGLIDDLFDGNTASMGRRRM | 676 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 24478955 | 24480985 | + | MELO3C017751.2.1 | Cme07g01926 | 333942 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme07g01926 | 676 | MobiDBLite | consensus disorder prediction | 201 | 232 | - | - | |
| Cme07g01926 | 676 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 61 | 674 | IPR004140 | GO:0000145|GO:0006887 | |
| Cme07g01926 | 676 | Gene3D | Exocyst complex component Exo70 | 109 | 674 | - | - | |
| Cme07g01926 | 676 | SUPERFAMILY | Cullin repeat-like | 125 | 665 | IPR016159 | - | |
| Cme07g01926 | 676 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Cme07g01926 | 676 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Cme07g01926 | 676 | PANTHER | EXOCYST SUBUNIT EXO70 FAMILY PROTEIN | 61 | 674 | - | - | |
| Cme07g01926 | 676 | MobiDBLite | consensus disorder prediction | 190 | 232 | - | - | |
| Cme07g01926 | 676 | Pfam | Exo70 exocyst complex subunit | 300 | 662 | IPR046364 | GO:0000145|GO:0005546|GO:0006887 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme03g00812 | Cme-Chr3:15285839 | Cme07g01926 | Cme-Chr7:24478955 | 6.43E-15 | dispersed | |
| Cme07g01926 | Cme-Chr7:24478955 | Cme09g01028 | Cme-Chr9:14417486 | 0 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme07g01926 | K07195 | - | csv:101220402 | 1241.48 |