Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme07g01937 | ATGGATCATATTGTACTGGTTCAATTAAAACTTTGCTCCTTAGACTCTGAGGCAGAAGTGATGGAGGTAGAAACGATGATGGAACAGAAGAGGAGTCTATGCTCGGTTGATGAGAGCGCTCTCACTTCACTGACACCCAAACGGCACAAGACTGATTTCTCTATCTCCTCTAAGGAGAGGAAAGACAAACTGGGTGAACGAATTATGGCATTGCAACAACTTGTTTCTCCATACGGAAAGACAGATACGGCATCTGTTCTACTGGAAGCAATGGAATATATCCAATTCCTTCACGAGCAAGTCAAGGTGTTGAGTGCTCCATATCTCCAAAGCACACCCACTGTTTTGTTGCAGGAGGTGGAGCCATGCAGCCACAGCCTGAGGAGCAGAGGCCTTTGTCTTGTTCCAATCTCGTGTACTGCTGGAGTTGCACGGAGCAACGGTGCGGATATTTGGGCTCCCGTGAAGACAATTTCTCCCAAATTTGAGAAGCACATCTCACCATTCAATTGA | 513 | 46.39 | MDHIVLVQLKLCSLDSEAEVMEVETMMEQKRSLCSVDESALTSLTPKRHKTDFSISSKERKDKLGERIMALQQLVSPYGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVLLQEVEPCSHSLRSRGLCLVPISCTAGVARSNGADIWAPVKTISPKFEKHISPFN | 170 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 24558779 | 24563713 | - | MELO3C017761.2.1 | Cme07g01937 | 333953 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme07g01937 | 170 | Gene3D | - | 46 | 114 | IPR036638 | GO:0046983 | |
Cme07g01937 | 170 | PANTHER | TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1 | 19 | 154 | - | - | |
Cme07g01937 | 170 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 48 | 97 | IPR011598 | GO:0046983 | |
Cme07g01937 | 170 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 19 | 154 | - | - | |
Cme07g01937 | 170 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 50 | 111 | IPR036638 | GO:0046983 | |
Cme07g01937 | 170 | SMART | finulus | 56 | 103 | IPR011598 | GO:0046983 | |
Cme07g01937 | 170 | CDD | bHLH_AtbHLH_like | 54 | 105 | IPR045239 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g00096 | Cme-Chr1:681451 | Cme07g01937 | Cme-Chr7:24558779 | 2.68E-33 | dispersed | |
Cme07g01937 | Cme-Chr7:24558779 | Cme08g00886 | Cme-Chr8:5813284 | 6.95E-28 | dispersed | |
Cme07g01937 | Cme-Chr7:24558779 | Cme08g00357 | Cme-Chr8:2256998 | 5.94E-31 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme07g01937 | - | - | cmo:103494587 | 300.441 |