Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g02006 ATGGGAGAGGAGAAAGTAGGGGAAGAAGGCACCAAGAAATTGAAAGGAAGAAAGTCCTCATGGGCAACCCTCCGCCGTGTCGACTCGCTCAATCTTGAGGCTGGTCGGGTTCCTGCCACTGCCGCCCATCGACTCCCCACTGTAAATTGGCAACGAACATTGAGTTTGGCATTTCAGAGCGTGGGAGTGGTGTACGGCGACATCGGGACATCACCGTTGTACGTGTATGCGAGCACGTTCAGCAACGGTATCGAGAACACAGACGACGTGATCGGAGTTCTATCGCTGATAATCTACACCATAGCATTGATCCCATTGTTGAAGTATGTGTTCATTGTGCTTTGGGCAAATGACAATGGTGATGGTGGAACATTTGCCCTTTACTCATTGTTGTGCCGCTACGTGAAAGTAGGGTTGATTCCAAACGAACAGCCGGAGGATAGAGAGCTCTCTAATTATCAGCTTGTTCTGCCTTCTAATCTGAGAAGGTCTCAAAAGGTGAAGGAGAAACTTGAGAACAGTATGTTTGCGAAAATTGTTCTCTTTCTCGTCACTATTGCTGGAACTTCCATGGTTATTGGTGATGGAGTTCTCACTCCATCTATTTCCGTGCTCTCAGCAGTGAGTGGAATCAGTTCACTAGGAACAGATGCAGTTGTGGGGATTTCAATAGCAATTCTTGTAATTCTATTCTGCATTCAAAGATTTGGAACTGACAAAGTGGGATTCTCATTTGCTCCAATAATATTTACTTGGTTTGCATTCATCGGTGGAATTGGCCTTTTCAATTTGTTCAAGCATGACCCTTCTGTTCTTAAAGCTTTTAACCCTAAATATATCTTTGATTATTTCAAAAGAAATGGCAAAGAAGCCTGGGTTTCTCTTGGTGGTGTTTTTCTTTGCATCACAGGGACTGAGGCCATGTTTGCTGATTTGGGTCACTTCAATGTTAGAGCTATCCAGATTAGTTTCTCTTCCATTGTATTTCCTGCTTTATTAGCAGCTTACAGTGGGCAAGCTGCATATCTAAGAAAATTCCCAGACCATGTTGGCAATACTTTCTATGACTCCGTTCCAGATTCTTTATACTGGCCAACATTCGTAGTTGCAGTAGCGGCTTCAATCATAGCAAGTCAAGCAATGATCTCAGGAGCATTTGCCATAATATCACAATCTTTAGCTTTAGGTTGCTTCCCAAGAGTAAAAGTAATCCACACTTCACCCAAATATGAAGGCCAAGTTTACATCCCAGAGATCAATTACCTTCTAATGATAGCATGTGTCATCGTAACCGCTGCGTTCAAAACCACTGATAACATCGGTCACGCCTACGGCATTGCCGTTGTCACCGTCATGATCATGACTACTGCCATGGTTTCTCTCATCATGATCGTCATTTGGAAGACGAGTATTTGGTTGATAGTTTTGTTCATTCTCATCTTTGGCTCTATCGAACTTCTCTATTTCTCGTCGGTTCTTTACAAGTTCACTCAAGGCGGGTTTCTCCCTCTTGTTCTTGCATTTTTTCTCATGACTATCATGGTTGTGTGGCATTATGTTCATAGGGAAAGATACATTTTTGAACTTAAAAATAAGGTTTCTAGTGGGTATATAACTGATTTAGCTAATAATTCTGATGTTAACCGAATCCCTGGAATTGGCCTTCTTTACTCCGAGTTGGTTCAAGGTATTCCTCCCATTTTCCCTCACTTCATTTCTAGTATTCCTTCGGTTCACTCCGTTATCGTCTTCGTCTCCATCAAGTCCATTCCAATCAGCAAAGTCGCACCCGACGAACGGTTTTTGTTTCGCCAAGTGGAGCCGAAAGAGTATCGTATGTTTCGATGTGTTGTCAGATATGGATATAAAGACATAGTAATTGGCTCTGATGAGTTTGAGCGGCAGTTGGTTGGGAGCTTGATACAATTCATACGCCAAGAACATATAATGCTAGAAGGTGTACCAATTGACCCGCCAGTTTCAGCCGCAACAGTGCATGTCCAAGGTGAAACGGTATCTGCCGAAGTGGCAAATCATTCGTCTCGCCGCTCGTCAGGCTCCATTCAGCCAGTCGGTGCATCGACAAAATCGAGGGGGTCGTCAAATGGAACGGCTGATCGTCAAGTACTAGGAGTGGCTGCAGTGGAGGAAGAGGTGGCATTTATAGAGAAAGCGATGAAAAAAGGAGTGGTTTACTTGCTGGGAGAAGCAGAAGTAGTGGCTGAACCAAAATCTTCATTGTTTAAGAAAATGGTGGTTAATTATGGTTATAGTTTCTTGAGGAAGAACTTCAGGCAAGGAGAGAATGTTCTTGAGATTCCACGTACTAGGCTTTTAAGGGTTGGAATGACTTATGAAATATGA 2364 43.23 MGEEKVGEEGTKKLKGRKSSWATLRRVDSLNLEAGRVPATAAHRLPTVNWQRTLSLAFQSVGVVYGDIGTSPLYVYASTFSNGIENTDDVIGVLSLIIYTIALIPLLKYVFIVLWANDNGDGGTFALYSLLCRYVKVGLIPNEQPEDRELSNYQLVLPSNLRRSQKVKEKLENSMFAKIVLFLVTIAGTSMVIGDGVLTPSISVLSAVSGISSLGTDAVVGISIAILVILFCIQRFGTDKVGFSFAPIIFTWFAFIGGIGLFNLFKHDPSVLKAFNPKYIFDYFKRNGKEAWVSLGGVFLCITGTEAMFADLGHFNVRAIQISFSSIVFPALLAAYSGQAAYLRKFPDHVGNTFYDSVPDSLYWPTFVVAVAASIIASQAMISGAFAIISQSLALGCFPRVKVIHTSPKYEGQVYIPEINYLLMIACVIVTAAFKTTDNIGHAYGIAVVTVMIMTTAMVSLIMIVIWKTSIWLIVLFILIFGSIELLYFSSVLYKFTQGGFLPLVLAFFLMTIMVVWHYVHRERYIFELKNKVSSGYITDLANNSDVNRIPGIGLLYSELVQGIPPIFPHFISSIPSVHSVIVFVSIKSIPISKVAPDERFLFRQVEPKEYRMFRCVVRYGYKDIVIGSDEFERQLVGSLIQFIRQEHIMLEGVPIDPPVSAATVHVQGETVSAEVANHSSRRSSGSIQPVGASTKSRGSSNGTADRQVLGVAAVEEEVAFIEKAMKKGVVYLLGEAEVVAEPKSSLFKKMVVNYGYSFLRKNFRQGENVLEIPRTRLLRVGMTYEI 787
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25134135 25139861 + MELO3C017828.2.1 Cme07g02006 334022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g02006 787 MobiDBLite consensus disorder prediction 674 704 - -
Cme07g02006 787 Pfam K+ potassium transporter 57 624 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme07g02006 787 PANTHER POTASSIUM TRANSPORTER 5 13 786 - -
Cme07g02006 787 TIGRFAM kup: potassium uptake protein 56 787 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme07g02006 787 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 13 786 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g02006 Cme-Chr7:25134135 Cme07g02155 Cme-Chr7:26036597 0 dispersed
Cme07g02006 Cme-Chr7:25134135 Cme04g01908 Cme-Chr4:26778147 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g02006 K03549 - csv:101205628 1399.42