Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g02031 ATGCCGAAACTGGTTTTGAAAGGGGGAACTAGGCCGCCATGGGTTGGCTTAGCTGCTGCTGTTTGGGTTCAAATAGCTGGTGGTTCTTCTTATAACTTCTCTCTTTATTCACACTTGCTTAAATCTGTTCTGGGTTTGAATCAGCAGCAGCTTACTGTGTTGGGTGTGGCTAATGACATTGGAGAGAGTATGGGTTTGGTTCCTGGCCTCGCTTGTAACAGATTTCCTCCATGGGTTATACTTTTGTTTGGTTATGGAGCTATTTGGCTTGCTGTTAGTAGGACTGTCCCTAATCTGCCTTATTGGCTGCTATGGCTCACACATTGTATTGCTACAAATAGCAATGCATGGTTTGGAACAGCTGTGCTTGTAACCAACATGAGGAACTTCCCTCTCAGCAGAGGTACCGTTGCTGGCATTCTTAAAGGTTATGTTGGGCTTAGTGCTGCTGTATACACGGTGATATACAGTTTGGTGCTCAAAAAGTCTGCTTTGAATTTACTGTTGTTTCTTACAATTGGGATACCCATCTTGTGCCTAGCGTTGATGTACTTTGTTCGACCTTGTACTCCGGCTTCAACAGAGGATCCATCTGAGCGAGCTCATTTTCTTTTCACACAAGCTGCTTGTGTTTTGCTAGGTCTTTTTTTAGTATCGACCACAATTCTAGATGCAACAACGACCCCTAGTGATGCCGTTGGATACACCTTAGTTGCCATTATGGTTATCCTTTTAATGTCTCCTCTTGCAGTTCCCATAAAAATGACCATTTGTGCAAAAACAAAAACAGTTGGCCCTCGAGTTGATTCTTCAGAACCTTTGGCTTCTGGAGGAAGCGATTCTTCCCAAATTGAACCTTTATTGACACCATCTTCCTCAGCTACGAATCTCGGAAGTTTCTATGAGAATGATGATGCATCAGATGTTGAAACCCTTCTTGCTGTGGGAGAGGGGGCAATTCACAAGAAGAAAAGAAGACCTAAAAGAGGGGAAGATTTCAAGCTCCGTGAAGCTGTAATCAAAGCTGATTTCTGGCTGCTTTGGTTCTTGTACTTCCTCGGGGTCGGTCCTGGAATAACAGTTCTCAACAATTTGTCTCAAATTGGGATTTCGTTAGGCATTAATGACACAACATTGCTATTGGCTCTTTTCAGCTTCTGCAATTTTGTTGGTCGTTTAGGCTCCGGTGTAATTTCTGAACACTTTGTCAGGTCAAGAATGATACCTCGCTCGCTATGGATGATGTTTGCACTCGTACTCATGTCTATAGCATTCCTCCTGTATGCCTCCGGCCTCACAATTACTCTCTACATCGCCACTGGTCTCACTGGAATCAGTTACGGAGTTCTTTATTCTATGATGGTCCCTCTTGCATCTGAGATTTTCGGCCTAAAGAATTTTGGCGTCATCTTCAACTTCATGCAGCTGGGGAATCCAATAGGAGCAGTCCTTTTCTCAGTTCTACTCACCAGTACTTTATACGACAAAGAAGCTGCTATGCAAGGTTCGATAACCTGCATAGGCCAACAGTGCTTCAGGACGACTTTCTTCATCCTTTCGGGCGTCGCTGGGTTGGGTTCAATCGTGAGCTTGATTCTGACTATCAGATTAAGGCCAGTGTATCAAATGCTTTATGCTGGTGGCTCGTTCCGCTTGCCTCAAAGTTCAGGTCATTGA 1677 44.13 MPKLVLKGGTRPPWVGLAAAVWVQIAGGSSYNFSLYSHLLKSVLGLNQQQLTVLGVANDIGESMGLVPGLACNRFPPWVILLFGYGAIWLAVSRTVPNLPYWLLWLTHCIATNSNAWFGTAVLVTNMRNFPLSRGTVAGILKGYVGLSAAVYTVIYSLVLKKSALNLLLFLTIGIPILCLALMYFVRPCTPASTEDPSERAHFLFTQAACVLLGLFLVSTTILDATTTPSDAVGYTLVAIMVILLMSPLAVPIKMTICAKTKTVGPRVDSSEPLASGGSDSSQIEPLLTPSSSATNLGSFYENDDASDVETLLAVGEGAIHKKKRRPKRGEDFKLREAVIKADFWLLWFLYFLGVGPGITVLNNLSQIGISLGINDTTLLLALFSFCNFVGRLGSGVISEHFVRSRMIPRSLWMMFALVLMSIAFLLYASGLTITLYIATGLTGISYGVLYSMMVPLASEIFGLKNFGVIFNFMQLGNPIGAVLFSVLLTSTLYDKEAAMQGSITCIGQQCFRTTFFILSGVAGLGSIVSLILTIRLRPVYQMLYAGGSFRLPQSSGH 558
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25322006 25326006 - MELO3C017850.2.1 Cme07g02031 334047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g02031 558 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 558 - -
Cme07g02031 558 MobiDBLite consensus disorder prediction 274 288 - -
Cme07g02031 558 Gene3D MFS general substrate transporter like domains 339 541 IPR036259 -
Cme07g02031 558 CDD MFS_Mch1p_like 12 526 - -
Cme07g02031 558 MobiDBLite consensus disorder prediction 265 288 - -
Cme07g02031 558 SUPERFAMILY MFS general substrate transporter 325 539 IPR036259 -
Cme07g02031 558 Pfam Nodulin-like 13 253 IPR010658 -
Cme07g02031 558 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 558 - -
Cme07g02031 558 SUPERFAMILY MFS general substrate transporter 11 192 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01273 Cme-Chr1:16109525 Cme07g02031 Cme-Chr7:25322006 2.37E-67 dispersed
Cme03g00122 Cme-Chr3:1625988 Cme07g02031 Cme-Chr7:25322006 2.62E-104 dispersed
Cme07g02031 Cme-Chr7:25322006 Cme02g01914 Cme-Chr2:25572403 1.17E-73 dispersed
Cme12g00024 Cme-Chr12:299428 Cme07g02031 Cme-Chr7:25322006 1.18E-48 dispersed
Cme07g02031 Cme-Chr7:25322006 Cme11g00393 Cme-Chr11:3987240 1.69E-102 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g02031 - - csv:101211550 1066.99