Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g02090 ATGTCGGTGCCTGCGGCTTCCTTCACCGCAGGTAGGGAGAAAACGTCGACGATCCAAAAGGAGGATTCCTTATGCTCTGCCCCTACTGGTATATTGGAACATGTCTCTTTCCGGTTTCCAAAACAGTTGATTTTATTGTGGTTTGTGATTACTGTAACCAATGCTGATGTTGCCGATGTTGCCAACATACCACCAACGCCTTTGGTTGCACCTGCTACTCGCGATATCCCTCTACCTGTGAAATTGCCTCTTCACCAACATCACCACCGGAAATATATGTCAGGACTAGCACCTTCATCTCCTCCCTATTTTGGGCATCTTATCACTTCTGGTCACCCACCCACAAGTTCAAATTTTTCCAAACCACTGATGAAAAGTGGACCAGCTCCTCCTGATGATAGGCTTGAAAACATTGCTCCCATACAATCCACTGCTGGTGCTATTCCCTCCGGCTTAGCTCAGCCACCACTTTCCCCTATTGCAGCAGACTGTTGCAAACCTGACATGGTGCTAAAACGAGGAAGTGGTGATGATTGCCATTGTGTGTATCCCATAAAAATTGATCTCCTCCTCTTAAACATATCACAGAATCCTAATTGGAAACTTTTTCTCGAAGAGTTAGCTTCTGAACTTGGTTTACGAGTCTCTCAGATTGAGCTGATAAACTTTTATGTACTTAGTTTATCGAGGTTAAATATCTCAATGGACATTACTCCCCACACTGGGATCAGCTTTTCTGCAGCTGACGCATCTGCAATAAACTCTTCACTTACAATGCATAAAGTTCGTCTGGATCCTACGCTGGTTGGCGATTACAGTCTTCTCAATATTACCTGGTTTAAGCCTCCTCCTCCTTCTCAAGCTCCTATAGCTTCTGCATCACCTGTAGCAGCTCCAGCATATCATTTTCCAGCCTCTACATCACCGAATTCTCCTAGTAAAGGACGCCATTCTAATCTGACACTTCTTCTTGGCATTGGCGCTGAAAAACCAAGGGTTGAGGACAAAGTGCCTGTGGCAGGATCTTTCCCTCATCCATCAAGTATGAGATTTTTAACTTATGAAGAGCTTAAAGAAGCAACTAATAACTTTGAAGCAGCCAGTATTCTGGGGGAGGGTGGATTTGGCAGGGTTTTTAAGGGTGTCTTAAGTGACGGCACAGCTGTTGCAATCAAGAGGCTTACAAGTGGAGGCCAACAAGGTGACAAGGAGTTTCTGGTCGAGGTTGAGATGCTTAGCCGATTGCATCATCGAAATCTTGTTAAACTTGTTGGCTACTACAGTAATCGCGACTCTTCACAAAATCTGCTGTGCTATGAACTTGTTCCAAATGGAAGCTTGGAGGCCTGGCTCCACGGTCCTTTGGGTGTTAATTGTCCTTTGGATTGGGACACTAGGATGAAGATTGCACTGGATGCTGCCCGAGGGCTCGCTTACCTTCACGAAGACTCGCAACCATGTGTGATACACAGAGACTTTAAGGCGTCAAATATATTGCTTGAGAACAACTTCCATGCTAAAGTTGCTGACTTTGGTCTTGCTAAACAAGCTCCGGAAGGCAGGGCTAATTACCTTTCTACTCGTGTGATGGGCACGTTTGGATATGTCGCCCCTGAGTATGCAATGACTGGCCATTTACTTGTTAAAAGTGATGTTTATAGCTACGGAGTTGTACTTCTCGAGTTGCTTACTGGCAGGAAACCTGTAGATATGTCACAACCATCTGGACAGGAGAATCTGGTCACATGGGCGAGGCCGATTTTGAGAGACAAGGATCGGTTAGAAGAACTTGCTGACCCACGACTCGGAGGAAAGTATCCGAAGGAAGATTTTGTGCGGGTGTGTACCATTGCTGCAGCCTGTGTTGCTCCTGAGGCTGGCCAACGTCCAACTATGGGTGAAGTTGTACAGTCTCTTAAAATGGTGCAACGCGTTACAGAATACCAAGACTCCATCGTACCATCCTCCAACAATCGAACCAATCTTAGACAGTCGTCCACAACTTTCGAGTCTGATGGATCCTCTTCAATGTTCTCTTCTGGTCCTTATTCTGGTTTAAGTGCTTTTGACAATGACAATGTATCTCGGACAGCAATTTTCTCCGAAGATCTTCATGAGGGAAGATGA 2127 45.46 MSVPAASFTAGREKTSTIQKEDSLCSAPTGILEHVSFRFPKQLILLWFVITVTNADVADVANIPPTPLVAPATRDIPLPVKLPLHQHHHRKYMSGLAPSSPPYFGHLITSGHPPTSSNFSKPLMKSGPAPPDDRLENIAPIQSTAGAIPSGLAQPPLSPIAADCCKPDMVLKRGSGDDCHCVYPIKIDLLLLNISQNPNWKLFLEELASELGLRVSQIELINFYVLSLSRLNISMDITPHTGISFSAADASAINSSLTMHKVRLDPTLVGDYSLLNITWFKPPPPSQAPIASASPVAAPAYHFPASTSPNSPSKGRHSNLTLLLGIGAEKPRVEDKVPVAGSFPHPSSMRFLTYEELKEATNNFEAASILGEGGFGRVFKGVLSDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFVRVCTIAAACVAPEAGQRPTMGEVVQSLKMVQRVTEYQDSIVPSSNNRTNLRQSSTTFESDGSSSMFSSGPYSGLSAFDNDNVSRTAIFSEDLHEGR 708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25650633 25656374 + MELO3C017909.2.1 Cme07g02090 334106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g02090 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Cme07g02090 708 MobiDBLite consensus disorder prediction 650 682 - -
Cme07g02090 708 Gene3D Transferase(Phosphotransferase) domain 1 442 663 - -
Cme07g02090 708 CDD STKc_IRAK 370 640 - -
Cme07g02090 708 ProSiteProfiles Protein kinase domain profile. 364 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g02090 708 PANTHER OS01G0750732 PROTEIN 36 328 - -
Cme07g02090 708 PANTHER OS01G0750732 PROTEIN 329 708 - -
Cme07g02090 708 SUPERFAMILY Protein kinase-like (PK-like) 339 641 IPR011009 -
Cme07g02090 708 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Cme07g02090 708 Pfam Protein kinase domain 365 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g02090 708 Gene3D Phosphorylase Kinase; domain 1 345 441 - -
Cme07g02090 708 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 36 328 - -
Cme07g02090 708 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 329 708 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02407 Cme-Chr1:32378686 Cme07g02090 Cme-Chr7:25650633 1.21E-91 dispersed
Cme04g00927 Cme-Chr4:12444515 Cme07g02090 Cme-Chr7:25650633 5.72E-125 dispersed
Cme07g01866 Cme-Chr7:24085083 Cme07g02090 Cme-Chr7:25650633 5.76E-86 dispersed
Cme07g02090 Cme-Chr7:25650633 Cme11g02350 Cme-Chr11:30503519 6.93E-105 dispersed
Cme07g02090 Cme-Chr7:25650633 Cme02g00246 Cme-Chr2:2012503 1.25E-121 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65041 PF00069 Pkinase 5.80E-44 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g02090 - - csv:101219278 1278.85