Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g02115 ATGAATCCATCGGAAATGGGGGAAAATTCTTCCGACGAAATAAAGATCTCAAAGGCAACTTGGATGTTTGATGGCTCCTATTGGCCAGGAACGTGGGAAGTTTCAGGTGAAGATGACCACTCTAGAGGGGACCATGTTGGTATAATTCAGGTTATGCTACCCTCTTCTGATGCAAAACCAGTTTATGGTTCAAACACAAATGGGAAGAACTTGATTGACACAATAGACGTGGATATTAGATTGCCAATGCTAGTTTACATGTCTCGTGAGAAGCGACTAGGGTACAATAACAAGAAGAAAGCTGGAGCGATGAATGCTCTTCTTCGAACCAGTGCAATCATGTCAAATGGACCCTTCATTCTCAATCTTGATTGTGACCACTACATAAATAATTCCTTGGCTCTAAGAGAGGGGATGTGTTTTATGCTTGACAAGGGCGGGAATCGAGTTTGTTATGTCCAATTTCCGCAAAGGTTCGATGGAATCGATCCAGACGATCTGTATGCAAATCATAATCCTGTATTACTTGATGTAAACATGAGGGCTATTGATGGGATACAAGGCCCTTATTATATAGGGACTTGTTGCATTTTTAGGAGGATAGCTCTCTATGGATTTAGTCCTGCTAGAGTAACAGAGCACCATGGTTTATTTGGCACTCGAAAAACTAAGCTGTTACTAAGAAAGGTGACGGTATCGAAGAAGGAAGACGATGAGATGGCGACTCGAAACAATCAATTTGCTTTAGATTGTGATGATGATGATGATGCAGACACTGGCTCCTTGCTTCTGCCAAAGAGATTTGGAAACTCTACTTCTCTGGCTGCATCAATTAAAGTTGTGGAGTTTCAAGGAAGATTGCTTCAAGAACTTGAAAGTACCTTTAGACGTTGCCACCATTGCCAAGGCCATTACTGTTATTTCCTGCGACTATGA 936 41.67 MNPSEMGENSSDEIKISKATWMFDGSYWPGTWEVSGEDDHSRGDHVGIIQVMLPSSDAKPVYGSNTNGKNLIDTIDVDIRLPMLVYMSREKRLGYNNKKKAGAMNALLRTSAIMSNGPFILNLDCDHYINNSLALREGMCFMLDKGGNRVCYVQFPQRFDGIDPDDLYANHNPVLLDVNMRAIDGIQGPYYIGTCCIFRRIALYGFSPARVTEHHGLFGTRKTKLLLRKVTVSKKEDDEMATRNNQFALDCDDDDDADTGSLLLPKRFGNSTSLAASIKVVEFQGRLLQELESTFRRCHHCQGHYCYFLRL 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25794031 25795723 - MELO3C017933.2.1 Cme07g02115 334131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g02115 311 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 10 294 - -
Cme07g02115 311 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 10 294 - -
Cme07g02115 311 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 69 217 IPR029044 -
Cme07g02115 311 Pfam Cellulose synthase 14 282 IPR005150 GO:0016020|GO:0016760|GO:0030244
Cme07g02115 311 SUPERFAMILY Nucleotide-diphospho-sugar transferases 86 203 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g02115 Cme-Chr7:25794031 Cme07g02118 Cme-Chr7:25800420 2.89E-158 dispersed
Cme07g02113 Cme-Chr7:25781267 Cme07g02115 Cme-Chr7:25794031 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g02115 K00770 - cmo:103494894 580.096