Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g02225 ATGAGCTTGTTAGGCCTTTGCCCTAACAACTCCCCTTCTCCTCTTTTCTCCTTCTCCAATTTTCATTTTCGTCTCCCCGTCCCTCGCCTCTACAATCATTGCTGCCTGAAAGGGGCAAAAGGTCCGGTCTTTACAGCACAGTTGGGTTATAAAAGCGACAGGCAGAGTGAGTTCCAACCAAAGGATTTGATGGCTGGAGAAAAGGAAATTTCAGGAATAAATAGAAACCCTTACCCACCCATTGAGCCATACAGTACTGGTTTTTTGAAAGTGTCGGATCTTCATACTATTTATTGGGAGCAATCTGGGAATCCCACTGGTCATCCAGTGGTCTTTCTACATGGAGGACCAGGGGGAGGAACTGCTCCAGGCAATAGAAGATTCTTTGACCCAGATTTTTATAGAATTATTTTATTTGATCAGCGAGGTGCCGGGAAAAGTACACCACATGCTTGCTTGGAGGATAATACCACGTGGAACCTCATTGATGATATTGAGAAGCTAAGGGAACACTTGGAAATTCCAGAGTGGCAGGTCTTTGGAGGTTCCTGGGGTAGTACGTTGGCTCTTGCTTACAGTCAATCTCATCCGGAAAAGGTTACGGGATTAGTTCTTAGAGGGATCTTTCTTCTGCGGAAAAAAGAAATTGATTGGTTTTATGAAGGTGGTGCTGCCGCTATATATCCTGATGCTTGGGAGTCTTTTAGAGATCTCATTCCCGAAAGTGAGAGAGGATGTTTTGTTGATGCTTATAGTAAAAGATTGAATTCAAAGGATATGGAAACCCAAGTTAGTATGCCTCAACTCCACAGAATGTCAGATTATGCAGCTGCTAGAGCGTGGACCAAATGGGAAATGATGACTGCTCATCTTTTGCCAAATGAGGAGAACATCAAAAGAGGGGAAGATGATAATTTTTCATTGGAGGATTCTGGGTTTTCTCAGGCTATGGCCCAACCACCATACTTTGAAAACCTCTTCGAGATTAGTTTTCTTCATTATTTGAAGAAGTTAGGGGCAAGGCCATCCCCAATACCAAGTGGTAAGATAAAGGAGCTCGTAGATAATATTGACAAGATACGACATATCAATGCTGTAATTGTACAGGGAAGATATGACGTTTGCTGTCCAATGATGTCTGCTTGGGATCTTCATAAAGTGTGGCCCGAAGCGGAATTAAAGATCATTTCCGATGCAGGACATTCTGCTAATGAGCCTGGAATAGCTGCGGAGCTCGTGGCTGCTAATGAGAAGCTGAAGAACATCCTCCAGAAGAATGGACCATAG 1287 43.51 MSLLGLCPNNSPSPLFSFSNFHFRLPVPRLYNHCCLKGAKGPVFTAQLGYKSDRQSEFQPKDLMAGEKEISGINRNPYPPIEPYSTGFLKVSDLHTIYWEQSGNPTGHPVVFLHGGPGGGTAPGNRRFFDPDFYRIILFDQRGAGKSTPHACLEDNTTWNLIDDIEKLREHLEIPEWQVFGGSWGSTLALAYSQSHPEKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPESERGCFVDAYSKRLNSKDMETQVSMPQLHRMSDYAAARAWTKWEMMTAHLLPNEENIKRGEDDNFSLEDSGFSQAMAQPPYFENLFEISFLHYLKKLGARPSPIPSGKIKELVDNIDKIRHINAVIVQGRYDVCCPMMSAWDLHKVWPEAELKIISDAGHSANEPGIAAELVAANEKLKNILQKNGP 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26413985 26421707 - MELO3C018038.2.1 Cme07g02225 334241

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g02225 428 PANTHER PROLINE IMINOPEPTIDASE 56 422 IPR005944 GO:0004177|GO:0005737|GO:0006508
Cme07g02225 428 PRINTS Prolyl aminopeptidase (S33) family signature 136 147 IPR002410 GO:0006508|GO:0008233
Cme07g02225 428 PRINTS Prolyl aminopeptidase (S33) family signature 110 118 IPR002410 GO:0006508|GO:0008233
Cme07g02225 428 PRINTS Prolyl aminopeptidase (S33) family signature 179 193 IPR002410 GO:0006508|GO:0008233
Cme07g02225 428 Gene3D alpha/beta hydrolase 73 422 IPR029058 -
Cme07g02225 428 SUPERFAMILY alpha/beta-Hydrolases 74 405 IPR029058 -
Cme07g02225 428 TIGRFAM pro_imino_pep_1: prolyl aminopeptidase 82 308 IPR005944 GO:0004177|GO:0005737|GO:0006508
Cme07g02225 428 Pfam alpha/beta hydrolase fold 109 404 IPR000073 -
Cme07g02225 428 PRINTS Alpha/beta hydrolase fold signature 133 148 IPR000073 -
Cme07g02225 428 PRINTS Alpha/beta hydrolase fold signature 193 206 IPR000073 -
Cme07g02225 428 PRINTS Alpha/beta hydrolase fold signature 179 192 IPR000073 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g02225 K01259 pip; proline iminopeptidase [EC:3.4.11.5] - csv:101217220 721.465
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g821 . Blo03g00047 Bda06g01143 . Bpe07g00301 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone3ag1060 Cone10ag1075 . . . . . . . . . . . . . . Cmo16g00310 . . . . Cpe14g00242 . Bhi11g01083 . . . . . . . . . . . . . Lsi03g00992 . . Cme07g02225
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007769 1 5 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 1 1 35