Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g02232 ATGGAAGGGAAGAATCCAAAAGTTATTGAAAACTCAGAAGGAGCTAGGACCACACCATCGGTGGTTGCTTTCAATCAGAAAGGTGAACTGCTTGTAGGAACGCCGGCAAAGAGACAGGCAGTGACTAATCCAACAAATACTGTGTTTGGAACCAAGCGTCTGATTGGTAGACGCTTTGATGACCCTCAGACGCAGAAGGAAATGAAGATGGTGCCATACAAGATAGTCAAAGCTCCAAATGGAGATGCTTGGGTTGAAGCCAATGGACAGCAGTACTCGCCAAGCCAGATTGGTGCTTTTGTATTAACAAAGATGAAGGAAACTGCTGAGGCGTACCTTGGAAAGAGTGTGTCCAAGGCCGTGATTACTGTTCCAGCTTACTTTAATGATGCACAGAGACAAGCAACAAAGGATGCTGGCAGGATTGCTGGTTTGGAAGTTCTTAGAATTATCAACGAGCCCACTGCTGCTGCACTTTCTTATGGAATGAACAACAAGGAGGGCCTTATTGCTGTCTTTGATCTTGGTGGTGGCACATTCGATGTTTCCATCTTGGAGATATCCAATGGGGTTTTTGAGGTGAAAGCAACAAATGGTGACACATTCTTGGGTGGAGAAGATTTTGATAACGCCCTTTTGGATTTCCTAGTGAGCGAGTTCAAGCGAACTGAGGGAATTGATCTTACAAAGGACAGGCTTGCCTTGCAGAGGCTTAGAGAAGCTGCAGAAAAGGCAAAGATTGAACTGTCATCCACATCACAGACTGAAATTAACCTGCCATTTATCACTGCTGATTCAACCGGTGCAAAGCATCTGAACATCACTTTGACCAGGTCGAAGTTTGAAAGTCTTGTCAACCACTTAATTGAAAGGACCAAGGCCCCATGTAAAAATTGTTTGAAGGATGCCAGTATTTCTATCAAAGAAGTGGATGAAGTGCTTTTAGTTGGTGGAATGACTCGTGTACCTAAGGTACAAGAGGTTGTTACAGAAATTTTTGGGAAGAGCCCCAGCAAAGGAGTGAATCCTGATGAAGCAGTTGCTATGGGAGCTGCAATTCAGGGTGGCATTCTTCGTGGTGATGTCAAAGAATTGCTTCTTCTGGATGTTACCCCACTTTCTCTCGGTATTGAGACACTTGGTGGTATCTTTACCAGGTTGATCAGTCGGAACACTACTATTCCAACTAAGAAAAGTCAGGTATTCTCAACCGCAGCTGACAATCAGACTCAGGTGGGTATCAAGGTATTGCAAGGTGAGAGGGAAATGGCTGCTGACAACAAGCTTCTAGGGGAGTTTGAGTTAGTTGGAATTCCTCCTGCCCCAAGAGGATTGCCTCAAATTGAGGTGACATTTGACATCGATGCAAATGGCATCGTTACCGTCTCTGCAAAGGACAAGTCCACTGGTAAAGAACAACAAATCACGATCCGATCTTCTGGAGGACTCTCAGAGGATGAAATTGACAAAATGGTCAAGGAAGCAGAGCTGCATGCCCAGAAGGATCAAGAGAGGAAAGCTCTCATTGACATCAGAAACAGTGCGGATACGACCATCTACAGCATCGAGAAAAGCTTGGGTGAGTACAGGGAGAAAATACCAAGTGAGGTTGCCAAAGAAATCGAGGATGCAGTGGCAGACTTGAGGAAGGCAATGTCAGAAGACAACCTCGAAGAGATCAAGTCAAAACTGGATGCTGCAAACAAAGCTGTATCTAAGATTGGTCAGCACATGGCTGGTGGTTCAGGTGGTGGTGCCGCTGGAGGAGGATCCCAGGGTGGTGAACAGGCATCTGAAGCTGAGTACGAAGAGGTGAAGAAATAA 1824 45.45 MEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTVFGTKRLIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSVSKAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVSEFKRTEGIDLTKDRLALQRLREAAEKAKIELSSTSQTEINLPFITADSTGAKHLNITLTRSKFESLVNHLIERTKAPCKNCLKDASISIKEVDEVLLVGGMTRVPKVQEVVTEIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLISRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKLLGEFELVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSEDEIDKMVKEAELHAQKDQERKALIDIRNSADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMSEDNLEEIKSKLDAANKAVSKIGQHMAGGSGGGAAGGGSQGGEQASEAEYEEVKK 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26457821 26461682 - MELO3C018045.2.1 Cme07g02232 334248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g02232 607 Pfam Hsp70 protein 1 578 IPR013126 GO:0005524|GO:0140662
Cme07g02232 607 SUPERFAMILY Actin-like ATPase domain 3 166 IPR043129 -
Cme07g02232 607 Gene3D - 483 580 IPR029048 -
Cme07g02232 607 PANTHER HEAT SHOCK PROTEIN 70KDA 1 589 IPR013126 GO:0005524|GO:0140662
Cme07g02232 607 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 360 516 IPR029047 -
Cme07g02232 607 Gene3D Actin; Chain A, domain 4 205 292 - -
Cme07g02232 607 SUPERFAMILY Actin-like ATPase domain 167 358 IPR043129 -
Cme07g02232 607 Gene3D - 162 342 - -
Cme07g02232 607 ProSitePatterns Heat shock hsp70 proteins family signature 2. 172 185 IPR018181 -
Cme07g02232 607 MobiDBLite consensus disorder prediction 575 607 - -
Cme07g02232 607 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 358 482 IPR029047 -
Cme07g02232 607 TIGRFAM prok_dnaK: chaperone protein DnaK 1 578 IPR012725 GO:0005524|GO:0006457|GO:0051082
Cme07g02232 607 CDD HSPA9-like_NBD 1 358 - -
Cme07g02232 607 Hamap Chaperone protein DnaK [dnaK]. 1 605 IPR012725 GO:0005524|GO:0006457|GO:0051082
Cme07g02232 607 ProSitePatterns Heat shock hsp70 proteins family signature 3. 313 327 IPR018181 -
Cme07g02232 607 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 483 580 IPR029048 -
Cme07g02232 607 Coils Coil 538 570 - -
Cme07g02232 607 PRINTS 70kDa heat shock protein signature 120 140 - -
Cme07g02232 607 PRINTS 70kDa heat shock protein signature 178 188 - -
Cme07g02232 607 PRINTS 70kDa heat shock protein signature 445 461 - -
Cme07g02232 607 PRINTS 70kDa heat shock protein signature 36 44 - -
Cme07g02232 607 PRINTS 70kDa heat shock protein signature 364 383 - -
Cme07g02232 607 PRINTS 70kDa heat shock protein signature 310 326 - -
Cme07g02232 607 PRINTS 70kDa heat shock protein signature 341 361 - -
Cme07g02232 607 PRINTS 70kDa heat shock protein signature 13 25 - -
Cme07g02232 607 PANTHER HEAT SHOCK 70 KDA PROTEIN, MITOCHONDRIAL 1 589 - -
Cme07g02232 607 Gene3D - 1 355 - -
Cme07g02232 607 Coils Coil 228 255 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00844 Cme-Chr5:10917619 Cme07g02232 Cme-Chr7:26457821 0 dispersed
Cme07g02232 Cme-Chr7:26457821 Cme09g01848 Cme-Chr9:22699488 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g02232 K04043 - csv:101216102 1135.17