Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme08g00050 | ATGGATATTATTTACTGTGCACGTCTACTATGTGTTGTTGTCTGTTTTGGGATGTTTGTATGCGCGTCTTGTCTGGATGAATTCGGTGATTCAACAGCTGTTTACATTGTAACTCTCAAGGAACCTCCTTCTGCTACTCATTATTATGGTCAGCTTAGACAAAATACCACTTCTTTTAGTACTTCTGGTGGATTAAGCATCCATAAAGCAAGAAACAAATCAAGAAAGCATCAAAGATATAGATCTTACATAGCTCGAGTTCATGATTCATTGTTGAAGAAGGTCTTGAGGGGAGAGAAATATCTGAAGCTGTACAGTTACCATTTCTTGATCAATGGATTTGCTGTGCTTGTTACCGAAGAACAGGCAAATAAACTTTCAAAGAGGATAGAGGTGGCAAATGTTGTCATGGATTTCTCTGTTAGAACTGCTACGACCCATACTCCACAGTTCTTGGGCCTCCCGCAGGGAGCTTGGTCTCAAGATGGTGGCTTTGAATCTGCTGGAGCTGGGATTGTGATAGGGTTCATTGACACTGGCATTGATCCTTCGCACCCCAGTTTTGCTGATGATTTGACTGATAATCCGTTTCCCGTTCCGGCTCACTTCTCTGGAATTTGTGAGGTAACTCCAGATTTTCCTTCTGGGTCTTGCAACCGGAAGCTTGTGGGAGCGCGCCATTTTGCAGCATCAGCTATAACAAGGGGAATATTTAATGCAACTCAGGATTATGCATCACCATTTGATGGTGATGGACATGGCACGCACACAGCTTCAATTGCTGCTGGAAACCATGGCATTCCAGTCATAGTTGCTGGACATCACTTTGGAAATGCCAGTGGGATGGCTCCTCGTTCACATATTGCTGTTTACAAGGCACTGTACAAAAGCTTTGGAGGTTTTGCTGCTGATGTTGTTGCTGCAGTTGATCAGTTTGTTTCTGGCTCTGCAATGGGAGTTGGAGTTGAGAAGTTCTTGACGACTTGGTATCAAACTTCTGCTGCTCAGGATGGGGTGGATATAATAAGTTTATCAATCACACCAAATCGGCGTCCTCCTGGTATTGCAACGTTTTTTAATCCCATTGATATGGCGCTGCTCTCTGCTGTAAAGACTGGTATATTTGTTGTGCAAGCGGCTGGCAACACTGGACCAGCACCAAAGAGCATGTCTTCCTTCAGTCCATGGATCTTTACTGTTGGCGCTGCTTCTCACGATAGAAGCTATGCTAACTCTATAAGCCTTGGCAATAATGTCACCATCCCGGGAGTCGGACTTGCACCTGGAACTTATAATGACACAAAGTACAAACTAATTGCTGCAATACATGCATTGAACAATGACACAAGTGTGTCGGAGGACATGTACGTGGGCGAATGCCAAGACTCGAGTAACTTTGATCAGAATCTGATCGAAGGGAACCTTCTAATCTGCAGCTATTCAATCAGATTTGTTCTAGGGCTTTCCACGGTTAAACAGGCTTTACAGACAGCAAAAAACTTGAGTGCTGCTGGTTTTAGGCTCAACCCAATTCCTATGAAAATGCCTGGCATCATTATTTCATCACCAGAAGATTCCAAGGTTGCGCTCTACCTTATGCTTCTTCAATACTACAATTCTTCCTTGGAAGTAGATGGATTAACAAAGAAAATTTCTAAATTTGGAGCCGTTGCTAGCATATGTGGAGGATTGAAGGCAAATTATAGCTCTTCTGCCCCACAAATTATGTACTACTCTGCTAGAGGACCAGATCCTGAAGACAGTTCTCTTGATGATTCTGATATTATGAAGCCCAACTTGGTAGCTCCTGGAAATTTCATATGGGCTGCTTGGAGTTCTGTTGCCACCGACTCTATCGAATTTCTTGGTGAAAACTTTGCCATGATGTCTGGAACAAGCATGGCTGCTCCTCATATTGCTGGCCTAGCCTCACTCATAAAACAGAAGTATCCTAGTCTTAGTCCTTCAGCCGTTGCATCTGCTCTATCGACGACAGCTTCTCTTTATGACAAGACTGGTGGACCAATCATGGCTCAGCGTGCTTATGCTAACCCCGAACAAAACCAGTCTCCAGCTACACCCTTTGATATGGGAAGTGGTTTTGTGAATGCAACAGCAGCTCTCAACCCAGGGTTGATATTTGATTCCAGTTATAGTGATTATATGTCGTTTCTTTGCGGTATCAATGGATCATCTCCTGTGGTATTCAACTACACAGCCCAGAATTGTGGGCTTTACAACTCTAGCATCACTGGAGCTGATTTGAACTTGCCCTCTGTGACTATAGCAAAACTTAACCAGTCGAGAGTAGTTCGACGAACCGTGACCAACATTGCTGGACCTGAGTTTTACAGTGTTGGTTGGAGTGCTCCTTATGGGATTTCTTTGAAAGTTTCTCCAGTTCGATTTACAATCAGCAGTGGCGAGAAACAAGAGCTAACCATATTCTTCAACGCCACGATGAACAGCTCAGTTGCTAGCTTTGGTAGAATTGGACTTTTCGGGAGTGCAGGCCATATAATAAACATCCCTCTTTCAGTAATTTTGAAGATCTCATATAACTATACTACTAATTGA | 2577 | 43.38 | MDIIYCARLLCVVVCFGMFVCASCLDEFGDSTAVYIVTLKEPPSATHYYGQLRQNTTSFSTSGGLSIHKARNKSRKHQRYRSYIARVHDSLLKKVLRGEKYLKLYSYHFLINGFAVLVTEEQANKLSKRIEVANVVMDFSVRTATTHTPQFLGLPQGAWSQDGGFESAGAGIVIGFIDTGIDPSHPSFADDLTDNPFPVPAHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNATQDYASPFDGDGHGTHTASIAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAVDQFVSGSAMGVGVEKFLTTWYQTSAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAVKTGIFVVQAAGNTGPAPKSMSSFSPWIFTVGAASHDRSYANSISLGNNVTIPGVGLAPGTYNDTKYKLIAAIHALNNDTSVSEDMYVGECQDSSNFDQNLIEGNLLICSYSIRFVLGLSTVKQALQTAKNLSAAGFRLNPIPMKMPGIIISSPEDSKVALYLMLLQYYNSSLEVDGLTKKISKFGAVASICGGLKANYSSSAPQIMYYSARGPDPEDSSLDDSDIMKPNLVAPGNFIWAAWSSVATDSIEFLGENFAMMSGTSMAAPHIAGLASLIKQKYPSLSPSAVASALSTTASLYDKTGGPIMAQRAYANPEQNQSPATPFDMGSGFVNATAALNPGLIFDSSYSDYMSFLCGINGSSPVVFNYTAQNCGLYNSSITGADLNLPSVTIAKLNQSRVVRRTVTNIAGPEFYSVGWSAPYGISLKVSPVRFTISSGEKQELTIFFNATMNSSVASFGRIGLFGSAGHIINIPLSVILKISYNYTTN | 858 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 397288 | 404016 | - | MELO3C007040.2.1 | Cme08g00050 | 334313 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme08g00050 | 858 | Pfam | Fibronectin type-III domain | 754 | 847 | IPR041469 | - | |
Cme08g00050 | 858 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 631 | 641 | IPR023828 | - | |
Cme08g00050 | 858 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 22 | 142 | IPR037045 | - | |
Cme08g00050 | 858 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 149 | 708 | - | - | |
Cme08g00050 | 858 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 333 | 851 | IPR045051 | - | |
Cme08g00050 | 858 | CDD | Peptidases_S8_3 | 144 | 667 | IPR034197 | - | |
Cme08g00050 | 858 | Pfam | Subtilase family | 169 | 678 | IPR000209 | GO:0006508|GO:0008236 | |
Cme08g00050 | 858 | Gene3D | - | 725 | 849 | - | - | |
Cme08g00050 | 858 | PANTHER | TRIPEPTIDYL-PEPTIDASE II-RELATED | 333 | 851 | - | - | |
Cme08g00050 | 858 | PRINTS | Subtilisin serine protease family (S8) signature | 630 | 646 | IPR015500 | - | |
Cme08g00050 | 858 | PRINTS | Subtilisin serine protease family (S8) signature | 249 | 262 | IPR015500 | - | |
Cme08g00050 | 858 | PRINTS | Subtilisin serine protease family (S8) signature | 169 | 188 | IPR015500 | - | |
Cme08g00050 | 858 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 20 | 312 | IPR045051 | - | |
Cme08g00050 | 858 | PANTHER | TRIPEPTIDYL-PEPTIDASE II-RELATED | 20 | 312 | - | - | |
Cme08g00050 | 858 | SUPERFAMILY | Subtilisin-like | 144 | 712 | IPR036852 | GO:0004252|GO:0006508 | |
Cme08g00050 | 858 | ProSitePatterns | Serine proteases, subtilase family, aspartic acid active site. | 174 | 185 | IPR023827 | - | |
Cme08g00050 | 858 | Gene3D | Peptidase S8/S53 domain | 171 | 721 | IPR036852 | GO:0004252|GO:0006508 | |
Cme08g00050 | 858 | Gene3D | - | 406 | 568 | - | - | |
Cme08g00050 | 858 | Pfam | Peptidase inhibitor I9 | 34 | 144 | IPR010259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme05g01295 | Cme-Chr5:21268432 | Cme08g00050 | Cme-Chr8:397288 | 0 | dispersed | |
Cme08g00050 | Cme-Chr8:397288 | Cme12g00903 | Cme-Chr12:15866560 | 3.63E-140 | dispersed | |
Cme08g00050 | Cme-Chr8:397288 | Cme01g02803 | Cme-Chr1:35044878 | 4.21E-90 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme08g00050 | - | - | csv:101208681 | 1565.82 |