Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00146 ATGAATTCCCTTTTGGCTTTTTTATCGCCGCTGCTTCCCTTTGCGGCTTCCCTCGTGTTTCTGCTCCTCTTTCTCGAGCAGATCTCTTATTTGAAGAAGAAACGCTCTGTTCCTGGTCCTCCCCTCGTGCTCCCCTTCGTCGGCAACGCAATTCCTCTCGTCAGAAACCCTGCCCGTTTCTGGGAAATTCAGGCTTCTTTGGCTAAATCCTCCGGTGTTGGTTTCTCCGTCAACTACATCGCCGGCAACTTCATCGTCTTTATTCGCGATACTGAGCTCTCCCACAAGATTTTCGCCAATGTGCGTTCCGATGCTATGAATCTCGTCGGTCATCCCTTCGGGAAGAAGCTATTTGGTGAAGATAATCTGATTTATATGTTAGGCCAAAAGCATAAGGATCTCCGCCGTCGAATCGCTCCTAATTTCACGCCTAAAGCGCTTTCCACATACACCGCGCTTCAACAGATCATCATTCTCAAACACTTGAAGCTTTGGGAACAGAAATCGTCGGAATCTTCACCGAAGCCCATTCCCTTGAGGTATTTTGCTCGAGATCTTAACCTCGAAACCTCTCAGATGGTGTTCGTCGGGCCGTATTTAGCCGAAAAGGTTCGCGAGAAGTTCAGAGTCGATTACAACATCTTCAATGTCGGTCTCATGAAACTCCCAATCGATTTACCTGGAACAGGTTTCAGAAACGCGAAACTCGCCGTCGACCGGCTAGTGGAGGTTCTTGCGGACTGTGCAGAGAAGAGCAAGAGGAAAATGAAGAAAGAAGAAGAGCCGACGTGTTTGATCGACTTTTGGATGCAGGACACTGTAAAAGAACTCGAAGCTGCCGCAGCAGCCGGCGAGCCAGAGCCCGTTCACACCAGCAACTTCGAACTCGGCTTGTATCTCTTCGATTTCCTCTTCGCGGCGCAAGACGCTTCCACTTCGTCGCTTCTATGGGCCGTAAGTCTCCTCGACTCGCATCCCGAGGTGGTTGACAAAGTTCGGGAAGAAGTCAAATCCATATGGTCACCGGAATCGGATACACTGATCTCATCGGAGCAGCTATCGGAAATGAAGTACACTCAGGCAGTGGCGCGTGAGGTGGTCCGTTACCGTGCTCCGGCAACGGTTGTGCCGCACGTGGCTGCGGCGGAGTTCCCGTTGACGGATTCATACACCATCCCAAAAGGTGCAATCGTTTTCCCATCTGCCTACGAGTCGAGCTTCCAGGGTTTCGTAGAACCGGAGCGATTCGACCCGGAACGGTTCTCGGAGGAAAGGCAAGAGGACCGAATTTTCAAAAGGAACTTTCTGGCGTTCGGTGCTGGGTCCCACCAGTGCGTTGGGCAACGGTACGCGCTCAACCAACTTGTGCTTTTCATCGCCATGTTTTGTACGTTGCTTGATTTCAAGAGGCACATATCCGACGGCTGTGATGAAATCGCTTTCAATCCCACCATCTGTCCCAAAGATGACTGCATGGTCTCCATTTCCAGGCGGTGCCCTCGATTTCCCAATCTCTCGCTTCAATAA 1527 51.02 MNSLLAFLSPLLPFAASLVFLLLFLEQISYLKKKRSVPGPPLVLPFVGNAIPLVRNPARFWEIQASLAKSSGVGFSVNYIAGNFIVFIRDTELSHKIFANVRSDAMNLVGHPFGKKLFGEDNLIYMLGQKHKDLRRRIAPNFTPKALSTYTALQQIIILKHLKLWEQKSSESSPKPIPLRYFARDLNLETSQMVFVGPYLAEKVREKFRVDYNIFNVGLMKLPIDLPGTGFRNAKLAVDRLVEVLADCAEKSKRKMKKEEEPTCLIDFWMQDTVKELEAAAAAGEPEPVHTSNFELGLYLFDFLFAAQDASTSSLLWAVSLLDSHPEVVDKVREEVKSIWSPESDTLISSEQLSEMKYTQAVAREVVRYRAPATVVPHVAAAEFPLTDSYTIPKGAIVFPSAYESSFQGFVEPERFDPERFSEERQEDRIFKRNFLAFGAGSHQCVGQRYALNQLVLFIAMFCTLLDFKRHISDGCDEIAFNPTICPKDDCMVSISRRCPRFPNLSLQ 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1060743 1062492 + MELO3C007140.2.1 Cme08g00146 334409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00146 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Cme08g00146 508 PANTHER CYTOCHROME P450 61 14 495 - -
Cme08g00146 508 SUPERFAMILY Cytochrome P450 30 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00146 508 Pfam Cytochrome P450 38 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00146 508 Gene3D Cytochrome P450 28 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00146 508 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00146 508 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00146 508 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00146 508 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00146 508 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00146 508 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00146 508 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00146 508 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00146 508 PANTHER CYTOCHROME P450 26 14 495 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g00146 Cme-Chr8:1060743 Cme04g00087 Cme-Chr4:718861 1.62E-26 dispersed
Cme08g00146 Cme-Chr8:1060743 Cme06g00309 Cme-Chr6:1881459 3.47E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00146 K09832 - csv:101221194 929.858