Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme08g00165 | ATGGAGAAAGAGCCTCTTCTTCCATATCTAAGCCCAAGAGGGAAACCGCCTCCGCCACCTCCTCAATTATGTCCACTCCCTGAAAACGATGAAATTACTCTGCCTATGACACCCACGGAGTTCAAAGACCGCTTGATCTTTGGTCCTTCATCGTCCCCACAAGACGCTTCTCCTATATTCGACGCTTTGACGCTATCTCTTTCCTCTTCGAGACCCTCTGCTTCATCTTCTCTTCAAGACCCATCTACACCTTTGGACCCAAGATCACAATCGCAGTCTCAGCAGGCGTGGCTTGTGGATTCCAATTACACATGGCCCAAAAGCAACCTCCATCGCTCCAAAACTGCACCTGCCATGGCGGTCATCAACGATGTCAATCATTCGCAGGAGCCCAAGCCACAATTTGGTAAACAGTCTATTATCCGCCAGGCGGTTGTTCTTCTAATTGTTTACTTATCATTGGGTGTGCTTATCTATTGGTTAAATCGTGATAATTTTGCGGCTCAAGAGACTCATCCTGTGGTCGATGCATTGTACTTTTGTATTGTAACGATGTGCACTATTGGATATGGAGATATTACCCCCAATAGTACAGCGACAAAGCTGTTCTCAGTATTGTTTGTGTTGGTGGGATTTGGGTTTATAGATATATTGCTCTCTGGAATGGTTAGTTATGTGCTCGATTTGCAGGAGAGTTATTTGTTGAGGAATGTAAAGAGGGGGGTGAAGCGTGAATCTGGGAAGTCCTATATAATTGATGTGAAAAAGGGAAGAATGAGGATTAGAATGAAGGTGGCATTGGCCTTGGGTGTTGTGATACTTTGTATAGGAGTTGGCATGGGTGTTATGCATTTTGTTGAGAACCTGGGATGGTTGGATTCATTTTATCTCTCCGTTATGTCCGTCACAACAGTTGGATATGGTGATCAGGCATTCAAGTCGATGACTGGTCGGATTTTTGCTTCAATCTGGTTGCTTGTATCAACCCTTGCTGTTGCTCGGGCGTTTCTTTATTTAGCGGAGGCAAGAGTAGACAAGCGGCATAGGATGATGGCAAAATGGATACTTGGTCAAGATATGACCATTTCTGAGTTTCTTGCTGCTGATATTGACAACAATGGCTTTGTGAGTAGGTCAGAATATGTGATATACAAGCTGAAGGAGATGGGTAGGGTATCCGAGAAAGATGTCATGCAGATATCCAATAACTTCGATAGGCTAGACAGTGGCAAATGTGGGAAGATTACACTGGCTGATCTCTTGGAAAGTCATCACTAA | 1278 | 44.29 | MEKEPLLPYLSPRGKPPPPPPQLCPLPENDEITLPMTPTEFKDRLIFGPSSSPQDASPIFDALTLSLSSSRPSASSSLQDPSTPLDPRSQSQSQQAWLVDSNYTWPKSNLHRSKTAPAMAVINDVNHSQEPKPQFGKQSIIRQAVVLLIVYLSLGVLIYWLNRDNFAAQETHPVVDALYFCIVTMCTIGYGDITPNSTATKLFSVLFVLVGFGFIDILLSGMVSYVLDLQESYLLRNVKRGVKRESGKSYIIDVKKGRMRIRMKVALALGVVILCIGVGMGVMHFVENLGWLDSFYLSVMSVTTVGYGDQAFKSMTGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRMMAKWILGQDMTISEFLAADIDNNGFVSRSEYVIYKLKEMGRVSEKDVMQISNNFDRLDSGKCGKITLADLLESHH | 425 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 1160920 | 1165533 | - | MELO3C007158.2.1 | Cme08g00165 | 334428 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme08g00165 | 425 | SUPERFAMILY | EF-hand | 359 | 422 | IPR011992 | - | |
Cme08g00165 | 425 | Gene3D | - | 137 | 237 | - | - | |
Cme08g00165 | 425 | PANTHER | TWO-PORE POTASSIUM CHANNEL 3 | 90 | 420 | - | - | |
Cme08g00165 | 425 | PANTHER | POTASSIUM CHANNEL, SUBFAMILY K | 90 | 420 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Cme08g00165 | 425 | Gene3D | - | 270 | 333 | - | - | |
Cme08g00165 | 425 | Gene3D | - | 334 | 425 | - | - | |
Cme08g00165 | 425 | SUPERFAMILY | Voltage-gated potassium channels | 141 | 233 | - | - | |
Cme08g00165 | 425 | Pfam | Ion channel | 147 | 226 | IPR013099 | - | |
Cme08g00165 | 425 | Pfam | Ion channel | 271 | 340 | IPR013099 | - | |
Cme08g00165 | 425 | MobiDBLite | consensus disorder prediction | 10 | 26 | - | - | |
Cme08g00165 | 425 | PRINTS | Two pore domain K+ channel signature | 183 | 211 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Cme08g00165 | 425 | PRINTS | Two pore domain K+ channel signature | 303 | 312 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Cme08g00165 | 425 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
Cme08g00165 | 425 | SUPERFAMILY | Voltage-gated potassium channels | 255 | 362 | - | - | |
Cme08g00165 | 425 | ProSitePatterns | EF-hand calcium-binding domain. | 369 | 381 | IPR018247 | - | |
Cme08g00165 | 425 | MobiDBLite | consensus disorder prediction | 71 | 93 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme08g00165 | Cme-Chr8:1160920 | Cme12g00812 | Cme-Chr12:14658348 | 2.23E-64 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme08g00165 | K05389 | - | csv:101220017 | 784.252 |