Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00188 ATGTATGTAAAAGAGAGTGAAGAAGATGCAAAATCATGTCTTCTTTACAATTACAAACATTCCATCAATGCCTTTGCTGCAATTCTTACTCCTCAACAAGCCTCCAAACTTTCAGAATTGGATGAAGTGGTGAGTGTGATAGAGAGTAAAAAGTATAGGATGGAGACAACAAGGTCATGGGAGTTTTCAGGGGTTGAAGAAGACAAACCCACCATTAATGACTTGGTTTCTAGAGCTAACTATGGAAAAGATGTTGTCATCGGAATGCTTGACAGTGGTGTGTGGCCAAATTCCAAAAGCTTCAGTGATAAAGGGATGGGACCCCTTCCAAAATCATGGAAGGGAATCTGCCAAACAGGACCTGCTTTCCAATCTGCTCATTGTAATAGGAAGATAATTGGAGCTCGATATTACCTAAAGGGATACGAACATCACTTTGGCCGTTTAAATGAAACGGCGGACTACCGATCACCCTGCGACAAGGACGGCCATGGATCTCACACAGCCTCCATCGCCGGCGGCCGGAGGGTATACAACGTGTCGGCCTTTGGTGGCGTCGCTTGGGGAACGGCCTCCGGTGGCGCCCCGTGGGCCCGCCTTGCAATTTACAAAGTTTGTTGGGCCATTCCCAACCAAATGAAAGCTTTGGGAAACGTTTGTTTCGACACCGACATGTTGGCTGCCATGGACGACGCCATTGCCGATGGTGTCGATGTTCTCAGCTTGTCTATTGGAAAATCGGAACCGTATAATTACACGGATGACGGAATCGCTATCGGAGCTCTACACGCCGTTAAAAAAGATATTGTTGTGTCTTGTAGCGCTGGGAATTATGGACCTACGCCGTCGGCGTTGTCTAATGTTGCGCCGTGGATTATCACCGTTGGAGCGAGCACTGTGGATCGGGAATTTTATTCTCCGGTCATTCTCGGTAATGGGTTGAAGATTAAGGGATTGTCAGTGGCTCCATCGAAGTTGGAGAGGAAGAAGATGTATCCATTAGTGTATGCTGGAGATATAATGAACCCTCATGCACCTCGAAACCAATCTGGGCTATGTGTGGCAGGCTCGCTTTCACATGAGAAAGCCAAAGGAAAAATAGTTTTGTGCTTTAGAGGAGAAGGAATCAGCCGATTCGCCGGCAGCCTCGAAGTTCAGAGATCGGGCGGCGCCGGAATGATACTCGGAAACGTGCCGGCCGTAGGACGAAGGCCCCACGCCGATCCCCATTTTGTTCCGGCCACCGCCGTGTCTTACGAAGATGCGAATGTAATCCTCAAATATATAAAATCTCGCACAAATCCAACTGCAACTATTGTTCCACCTGTCACTATCTACGGCTCCAGGCCCGCGCCGGCCATGGCCAACTTCTCAAGTCGAGGTCCAAACCCCATCGACCCTCATTTTCTTAAGCCGGACATAACAGCTCCGGGAGTGGACATATTAGCAGCATGGTCCGAACAAGATTCCCCAACTAAACTATCTAAATACTTAGACCCTCGTATTGTCCAATACAATCTCTACTCCGGCACTTCCATGTCTTGTCCCCACGTCTCCGCCGCCGCCGCCCTCCTCCGTGCCATCCACCCTACATGGTCCCAAGCCGCCATCCGCTCCGCCCTCATGACCACCTCCACCACCAACAATAAATCCGGCCAACCCATCACCGACGACTCCACCCCCGACAACTCCCCCGCCACCCCTTTCTCCTTCGGCTCCGGCCACTTCCGTCCCTCCAAGGCGGCCGACCCCGGCCTCGTCTACGACTCCAATTACACCGATTACCTCCATTACCTGTGCGGCCTCAAAATGAACTCCATTGACCCTTCCTTCACGTGCCCTCCACGTCCTCTCCATCCCCATGACCTGAATTACCCTTCCATTGCTGTCCCTCAACTCAGAGACGTCGTGAGGATCAAAAGGACGGTTACTAATGTGGGCGGCGGAGGTAAAAGTGTATACTTTTTTAAGAGCGAAGCGCCGCCGGGGGTGGCGGTGAGTGCTTCTCCGAATATATTGTATTTCAATAGAGTTGGGGAGAGGAAGAAATTTACAATTACAATTAGTAGAAAAGTAAATAGTAGTAGTAGTAGTAGAAGAAGTAAAAAAGGGGAAGAATACTCTTTTGGTTGGTTTGCTTGGAGTGATGAGATTCACTATGTTCGTAGCCCAATTGCAGTTTCTACTTAA 2190 49.54 MYVKESEEDAKSCLLYNYKHSINAFAAILTPQQASKLSELDEVVSVIESKKYRMETTRSWEFSGVEEDKPTINDLVSRANYGKDVVIGMLDSGVWPNSKSFSDKGMGPLPKSWKGICQTGPAFQSAHCNRKIIGARYYLKGYEHHFGRLNETADYRSPCDKDGHGSHTASIAGGRRVYNVSAFGGVAWGTASGGAPWARLAIYKVCWAIPNQMKALGNVCFDTDMLAAMDDAIADGVDVLSLSIGKSEPYNYTDDGIAIGALHAVKKDIVVSCSAGNYGPTPSALSNVAPWIITVGASTVDREFYSPVILGNGLKIKGLSVAPSKLERKKMYPLVYAGDIMNPHAPRNQSGLCVAGSLSHEKAKGKIVLCFRGEGISRFAGSLEVQRSGGAGMILGNVPAVGRRPHADPHFVPATAVSYEDANVILKYIKSRTNPTATIVPPVTIYGSRPAPAMANFSSRGPNPIDPHFLKPDITAPGVDILAAWSEQDSPTKLSKYLDPRIVQYNLYSGTSMSCPHVSAAAALLRAIHPTWSQAAIRSALMTTSTTNNKSGQPITDDSTPDNSPATPFSFGSGHFRPSKAADPGLVYDSNYTDYLHYLCGLKMNSIDPSFTCPPRPLHPHDLNYPSIAVPQLRDVVRIKRTVTNVGGGGKSVYFFKSEAPPGVAVSASPNILYFNRVGERKKFTITISRKVNSSSSSRRSKKGEEYSFGWFAWSDEIHYVRSPIAVST 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1286737 1296222 - MELO3C007179.2.1 Cme08g00188 334451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00188 729 Gene3D - 599 729 - -
Cme08g00188 729 Gene3D Peptidase S8/S53 domain 84 595 IPR036852 GO:0004252|GO:0006508
Cme08g00188 729 CDD Peptidases_S8_3 52 546 IPR034197 -
Cme08g00188 729 MobiDBLite consensus disorder prediction 543 570 - -
Cme08g00188 729 Pfam Subtilase family 82 556 IPR000209 GO:0006508|GO:0008236
Cme08g00188 729 Pfam Peptidase inhibitor I9 5 54 IPR010259 -
Cme08g00188 729 Pfam Fibronectin type-III domain 622 727 IPR041469 -
Cme08g00188 729 SUPERFAMILY Subtilisin-like 75 586 IPR036852 GO:0004252|GO:0006508
Cme08g00188 729 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 3 727 - -
Cme08g00188 729 CDD PA_subtilisin_like 308 439 - -
Cme08g00188 729 Pfam PA domain 332 423 IPR003137 -
Cme08g00188 729 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 54 IPR037045 -
Cme08g00188 729 Gene3D - 301 446 - -
Cme08g00188 729 ProSitePatterns Serine proteases, subtilase family, serine active site. 510 520 IPR023828 -
Cme08g00188 729 MobiDBLite consensus disorder prediction 543 576 - -
Cme08g00188 729 PRINTS Subtilisin serine protease family (S8) signature 160 173 IPR015500 -
Cme08g00188 729 PRINTS Subtilisin serine protease family (S8) signature 509 525 IPR015500 -
Cme08g00188 729 PRINTS Subtilisin serine protease family (S8) signature 82 101 IPR015500 -
Cme08g00188 729 ProSiteProfiles Serine proteases, subtilase domain profile. 59 582 - -
Cme08g00188 729 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 727 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g00188 Cme-Chr8:1286737 Cme06g02720 Cme-Chr6:34411012 0 dispersed
Cme08g00188 Cme-Chr8:1286737 Cme01g02803 Cme-Chr1:35044878 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00188 - - csv:101217410 1432.16