Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00247 ATGGGCCATGGCCAATCCACATTGCAACAACCACTTTTATTCTCTCAGGATTTGCCTTCATCTTTACTACTACGACTTCACAAAGCTGGACCAGTTGTCGACTGCCCTTCTCTTTCAAAATTGGAATGGCTATGCTTTAGAAGTTTAGAACTGATACAAGCACTTCGTTTAAAGATGGGTTCTGGACGTTGGTTTAAGGCAGTAATTCGCTTAAAAAAAGTGAAAACCAGCAGTTCGAAACAAACTAAGGAGAAATTGGATGATTTGCAAAAAGATTCCCCAAGGTTTAAAAATGATGGTGCTAATGGGAAGAGTAAGTCTTTTGGGATGCCGATTGAAGATGTAGCTGCAGTTCGAATTCAGACAGCATACCGAGCATATCGTGCCAGGAAAAATTTACGTCTCTTGAAAGGGGCCTTCAGACTGCAGAATCTGACTCAAGGTCATTCCGTTAGAAAGCATGCTACATCTACACTAGGTTATCTTCATTCATGGAGCCATATACAGGCTCAAATTAGGGCTCGTCGACTTTGTATGGTGACAGAAGGACGACAGAGACAAAAAAGATTAGAAAATCAACGAAAACTTGAAGCTAAGCTTCATGATATAGAGGTGGAGTGGTGTGGCGGTGCAGACTCCATGGACGGGATTCTTTCAAGGATACATGATAGAGAAGAAGCAGCTGTTAAGCGCGAGCGTGCTTTGGCATATGCATTCTCACATCAGTGGAGAGCAAACTCTAATGAGATGTATGGGTTGGGTAAAGATGAACTTGGTAAAGCCGATTGGGGTTGGAGCTGGAAAGAACGATGGATAGCTGCTCGTCCATGGGAAAGCCGTGTACCATCTCAGTTTGTTAGTCCAAAGAAATCTACAATCAGACAATCAAGCAAAGTCAGTAAGAGAAACTCACCATCCCCTAAAGCACGAGGTCCAGTTAAGCCTCCTTCCCCGAATGGGAAATCATCTGTAAAGGCTCGGAGATTGTCTTATCCAGCAACCGAGAAAACCGAGAAACTGCCTACACAAGAAAAAGGTGTCAAAGAAAGCATTAAAAATGACAAGAATGACAAAGGGAACACCAAGAAAGAAGAAACAACATCCTAA 1107 42.73 MGHGQSTLQQPLLFSQDLPSSLLLRLHKAGPVVDCPSLSKLEWLCFRSLELIQALRLKMGSGRWFKAVIRLKKVKTSSSKQTKEKLDDLQKDSPRFKNDGANGKSKSFGMPIEDVAAVRIQTAYRAYRARKNLRLLKGAFRLQNLTQGHSVRKHATSTLGYLHSWSHIQAQIRARRLCMVTEGRQRQKRLENQRKLEAKLHDIEVEWCGGADSMDGILSRIHDREEAAVKRERALAYAFSHQWRANSNEMYGLGKDELGKADWGWSWKERWIAARPWESRVPSQFVSPKKSTIRQSSKVSKRNSPSPKARGPVKPPSPNGKSSVKARRLSYPATEKTEKLPTQEKGVKESIKNDKNDKGNTKKEETTS 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1613196 1617292 - MELO3C007235.2.1 Cme08g00247 334510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00247 368 MobiDBLite consensus disorder prediction 284 304 - -
Cme08g00247 368 MobiDBLite consensus disorder prediction 331 368 - -
Cme08g00247 368 PANTHER IQ-DOMAIN 9 59 338 - -
Cme08g00247 368 Gene3D - 113 159 - -
Cme08g00247 368 MobiDBLite consensus disorder prediction 282 368 - -
Cme08g00247 368 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Cme08g00247 368 PANTHER IQ-DOMAIN 5-RELATED 59 338 - -
Cme08g00247 368 MobiDBLite consensus disorder prediction 80 105 - -
Cme08g00247 368 MobiDBLite consensus disorder prediction 80 99 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01328 Cme-Chr7:18718264 Cme08g00247 Cme-Chr8:1613196 2.01E-68 dispersed
Cme08g00247 Cme-Chr8:1613196 Cme09g00610 Cme-Chr9:6408904 1.48E-34 dispersed
Cme08g00247 Cme-Chr8:1613196 Cme10g00057 Cme-Chr10:431699 1.60E-38 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00247 - - csv:101220729 585.489