Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00260 ATGGGAAAACATTCGAAGACCAGTTGCAAGTCGGCCTCCCACAAGCTATTTAAGGATAAGGCAAAGAACCGGGTTGATGATCTGCAAAGTATATTTGTAGATTTGCAGTATGCAAGGAAAGAGAGCCGCACAGTTGATGTGACGGTTCTCGAGGAACAAGTCCATCAGATGCTTCGTGAGTGGAAAGCTGAGCTGAACGAGCCTTCTCCAGCATCCTCTTTGCAACAAGGTGGAAGTCTTGGGTCGTTTTCATCGGACATTTGTCGATTGTTACAACTTTGCGAGGAGGATGATGATGCGTCTAGTCCATTAGCTGCTCCTAAGCCTGAACCTAATGAACAAAATTTGCAGGTTGGAGATACTATGGCACTTCAAGAGGGATTTAATGTGAATCGTGTACACCAAGAACAAGGCTTCCCTCTAGTGGATCAACGCAAGAACTCCCCTTCAGGAGTTCATGGTATGGCTATGAATAACTTGGAAGGACCTACACATTTGGAGTGTCATCAGCTTGATTTGCATCAGGGTTTTGAGCACAACTTTTACTCTGTCCTTAATGGTAGAGGATTGTGTGGGGAGGGTGCAATTCCTCATGTTTCTAGCTACTGTCCCAGTATTTTCCCTCCACCTGCTGCTTTTTTAGGTCCAAAATGTGCACTTTGGGATTGCCCACGACCTGCCCAAGGGATGGATTGGTGTGAGGACTACTGTAGCAGCTTCCATGCTGCCTTAGCATTGAATGAAGGTCCTCCTGGAATGGGTCCAGTTTTACGGCCTGGTGGAATTGGTCTGAAAGATGGTTTGCTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGGAAAGATGTTGGTATCCCTGAATGTGAAGGAGCTGCCACCGCAAAGTCCCCATGGAACGCTCCTGAGCTTTTTGATCTGTCAATATTGGAGGGTGAGATGATTAGGGAGTGGCTTTTCTTTGATAAGCCTCGTAGAGCATTTGAGAGTGGTAATAGAAAGCAGAGGTCACTGCCTGATTACAGTGGACGCGGTTGGCATGAGTCAAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAAAGATCTTATTACATGGATCCTCAGCCATTGAACCACTTTGAGTGGCATCTTTATGAATATGAAATTAACAAGTATGACGCTTGCGCTTTGTATAGATTGGAGCTGAAACTTGTTGATGGGAAAAAAGGTTCTAAGGCAAAGGTATCTAATGATTCAGTTGCTGATTTACAGAGGCAAATGGGGAGACTGACTGCCGAATTTCCTGATAATAAACGCTTTGTTAAGGGGAGGACCAGAATTAACACAAAAGTTGGTCTTGGAAATGTTTACCCCTCAGCAAATAGAGTCATGCCGCCCAGTGGAACTTATGACTATATGCTTCATGCCCAATATGATTACCTTGTGGAGAATTTGAGTGAATATTACCTTACATAG 1452 44.63 MGKHSKTSCKSASHKLFKDKAKNRVDDLQSIFVDLQYARKESRTVDVTVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSSDICRLLQLCEEDDDASSPLAAPKPEPNEQNLQVGDTMALQEGFNVNRVHQEQGFPLVDQRKNSPSGVHGMAMNNLEGPTHLECHQLDLHQGFEHNFYSVLNGRGLCGEGAIPHVSSYCPSIFPPPAAFLGPKCALWDCPRPAQGMDWCEDYCSSFHAALALNEGPPGMGPVLRPGGIGLKDGLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSILEGEMIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKYDACALYRLELKLVDGKKGSKAKVSNDSVADLQRQMGRLTAEFPDNKRFVKGRTRINTKVGLGNVYPSANRVMPPSGTYDYMLHAQYDYLVENLSEYYLT 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1685404 1689476 - MELO3C007248.2.1 Cme08g00260 334523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00260 483 PANTHER TRANSCRIPTION FACTOR VOZ1 1 483 IPR039277 GO:0006355|GO:0048578
Cme08g00260 483 PANTHER TRANSCRIPTION FACTOR VOZ1 1 483 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g00861 Cme-Chr11:11358542 Cme08g00260 Cme-Chr8:1685404 3.97E-179 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41741 None None None None Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00260 - - csv:101219536 980.319