Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00272 ATGGAGTCCCAGTTTCTCTCACGCGCCACCTCCTTCGCCGGCGGCATTCCCTCCCTCCGCAAGTTGCACAGAGACGCCACCACTAACAGCCACCATGTCGCCTTCGTTCACACTAGGCCCATCGCCGAGGGAGCCAACTTGATCTGGGGAAGACAACTCCGCCCCTCTTTGCTCCTCGATACGCCGCATCTTGTCTCGGCTAAACGTGAGACTATTCGCCCTACCTTTGCGGCGGCCTCCTCTTCTCCAGCCGGAGGTAGCGATTCCGCCGGAGAGGCGAAGGTTGCTCCGGTAGGTTTCCTCGAGAAGTACCCGGCGTTGGTCACCGGATTTTTCTTCTTCATGTGGTACTTTTTGAACGTGATTTTCAATATCCTCAATAAGAAGATATATAATTACTTCCCCTATCCATATTTTGTGTCGGTGATCCATTTAGTTGTTGGGGTTGTGTACTGTTTGATAAGCTGGGCAGTGGGTCTTCCTAAGCGAGCACCTATTGATTCAACCCTCCTGAAGTTGCTGATCCCTGTAGCTTTCTGTCATGCACTTGGCCATGTCACTAGCAATGTCTCATTCGCAGCTGTTGCTGTCTCATTCACTCACACGATCAAAGCTCTGGAACCATTCTTTAACGCTGCCGCTTCTCAATTTATTTTGGGGCAATCCATTCCCATTACCTTGTGGCTTTCATTGGCTCCTGTTGTCATTGGTGTGTCAATGGCATCCTTGACTGAGCTTTCATTTAACTGGACTGGTTTCATTAGTGCTATGATTTCCAATATTTCCTTTACCTACAGAAGCATTTATTCAAAGAAAGCCATGACTGACATGGACAGCACGAACGTCTATGCCTATATTTCCATTATTGCTCTCCTTTTCTGCATTCCACCTGCTGTGATCGTGGAAGGACCTCAACTGCTAAAGTTTGGTTTCAATGATGCCATAGCCAAAGTTGGTCTAACCAAATTCGTCTCAGATCTCTTCTGGGTAGGAATGTTTTATCACCTTTACAATCAGTTAGCAACCAACACCTTGGAGAGGGTAGCACCACTTACTCATGCAGTTGGAAATGTGCTGAAACGTGTATTTGTGATTGGATTCTCCATCATTGTCTTTGGTAACAAAATCTCTACACAGACTGGTATTGGAACCTGCATTGCAATTGCAGGAGTAGCTCTTTACTCTTACATCAAGGCTAAGATGGAAGAAGAGAAACGACGAACAAAGGTGGCTTGA 1236 46.93 MESQFLSRATSFAGGIPSLRKLHRDATTNSHHVAFVHTRPIAEGANLIWGRQLRPSLLLDTPHLVSAKRETIRPTFAAASSSPAGGSDSAGEAKVAPVGFLEKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLVVGVVYCLISWAVGLPKRAPIDSTLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALLFCIPPAVIVEGPQLLKFGFNDAIAKVGLTKFVSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTCIAIAGVALYSYIKAKMEEEKRRTKVA 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1752317 1756288 + MELO3C007259.2.1 Cme08g00272 334535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00272 411 Pfam Triose-phosphate Transporter family 108 395 IPR004853 -
Cme08g00272 411 PANTHER BNAC02G47130D PROTEIN 40 403 - -
Cme08g00272 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 324 396 - -
Cme08g00272 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 151 244 - -
Cme08g00272 411 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 107 405 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cme08g00272 411 PANTHER SOLUTE CARRIER FAMILY 35 40 403 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g00272 Cme-Chr8:1752317 Cme10g00361 Cme-Chr10:2327877 0 dispersed
Cme08g00272 Cme-Chr8:1752317 Cme12g01691 Cme-Chr12:23801716 4.31E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00272 K15283 - csv:101220728 785.793