Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00286 ATGGCTCGTAATCTCATATTCCTTCTCCTTCTCTTCTCCTTCAGTTCTCCATCGCTTTCAGCTTCAATTCCATCTCCCAATTCCGAATGTGAAGCTCAGCTTCAACAAGGCTGCCATGACAGAGCCGAGTCTCTCAAACTCAAGCTCATCGCCATTGCTACAATTTTAGTCGCGAGCATGATCGGCGTTTCTCTTCCCCTCTTCTCCCGCGCCATGCCAGTTCTTCAACCAGAGGGAAAAACCTTTGCAATTGTCAAGGCATTTGCCTCCGGTGTGATTCTAGCAACTGGTTATATGCACGTTCTCCCTGATTCCTTCAATTTTTTAACATCCCCCTGTTTGCCAGAGAATCCATGGCGGAAATTCCCTTTCCCCACATTCATAGCAATGCTATCCGCTATCATGACTCTAATGTTGGACTCTTTTACGTTGAGCCACTACAATAAACAGTCGGTGCAGGATCAATTATCAGAAGAGGAGGAGATCAAGAATGAGAACCGCAAGGAAATGAGTGAAAATTTGGGTAAAGAAGAAGGAACCGGAAAAAAACTCGATTCGCAATTGCTACGACACCGTGTTATTGCGCAATTACTAGAAGCTGGGATTCTAGTGCATTCGGTAGTGATAGGGCTTTCACTAGGGGCTTCGGAGAATCCGTGCACCATAAGACCGCTCATCGCTGCGCTGTGCTTTCATCAACTGTTTGAAGGGATGGGGCTTGGAGGGTGCATTCTACAGGCGGAATACAGGATAAAGATGAAGGCGATAATGGTGTTTTTCTTCTCGGTTACGACGCCGTTTGGAATAGGATTGGGGATTGGGTTGTCGAATGTGTACAGTGAGAATAGTCCGACGGCGCTAATAGTAGTGGGGATTTTGAATGCTTTATCGGCTGGGTTGCTGAATTACATGGCGTTGGTTGATTTATTGGCGCATGATTTCATGGGGCCTAAATTACAAGCCAATCTCAAGCTGCATATATGGGCTTATGTTGCTGTTTTGTTGGGAGTTGGAGGCATGTCTTTGTTGGCAAAATGGGCTTAG 1044 46.07 MARNLIFLLLLFSFSSPSLSASIPSPNSECEAQLQQGCHDRAESLKLKLIAIATILVASMIGVSLPLFSRAMPVLQPEGKTFAIVKAFASGVILATGYMHVLPDSFNFLTSPCLPENPWRKFPFPTFIAMLSAIMTLMLDSFTLSHYNKQSVQDQLSEEEEIKNENRKEMSENLGKEEGTGKKLDSQLLRHRVIAQLLEAGILVHSVVIGLSLGASENPCTIRPLIAALCFHQLFEGMGLGGCILQAEYRIKMKAIMVFFFSVTTPFGIGLGIGLSNVYSENSPTALIVVGILNALSAGLLNYMALVDLLAHDFMGPKLQANLKLHIWAYVAVLLGVGGMSLLAKWA 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1831541 1832584 + MELO3C007271.2.1 Cme08g00286 334549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00286 347 Coils Coil 149 173 - -
Cme08g00286 347 Pfam ZIP Zinc transporter 46 344 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cme08g00286 347 PANTHER ZINC TRANSPORTER 7 27 347 - -
Cme08g00286 347 PANTHER ZINC/IRON TRANSPORTER 27 347 - -
Cme08g00286 347 TIGRFAM zip: ZIP zinc/iron transport family 30 347 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cme08g00286 347 MobiDBLite consensus disorder prediction 155 179 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g00286 Cme-Chr8:1831541 Cme12g00970 Cme-Chr12:16943369 2.64E-136 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00286 K14709 - csv:101204028 593.964