Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00372 ATGGCAATTATGTGCTATCTTAGTTCAATTTTTCATAAAAGGATAGTCGTTGATGTTGATGGGGAGGAAGAAGAAAATTGCCAACGTTATCTATCCTGCTCAGGATCCAACACAGCTCACCCCAATCTAAATTCAAACATCAATTTCCTATTGAATTCCTTGATCTCTCATGCTTCCTCTCGCACTTTCTACACTGAGACCTCTAATGGAATCCATGGCCTCTTCCTCTGCCGAGGGGATATTCCCAATGAGACTTGTCGTACATGCATCGAAGGAGCTAGTCAACAAATCAAGGTCGATTGTGCATCACAAACAAATGGTACCATAGGCTTTGATGAATGTATGTTGAGATACTCAGTTGTGAACTTCTTTGGAATTCTGGAGATGTCACCAAGAATACTACTATATAATAGTCTGAATCAATCTACTTTTGAAGACCGCGATTTCGTCGATCTTGCATTGGTGTCTAATTTAGTAAGAGATGCCACAAATGCGGATTCTATGTTCAAGGAAGGTGAGGTAAATATAGCGGGGGTGGATCAGAGATTTGGATTGGCACAGTGTACAAGAGGTATCGATAAGCGTGATTGTGAGTTCTGTTTGACAAATTTAGTGGATTACGCCAAGGGATGTTGCCTAAGGCAACGGGGATGGCGAGTTTTAGCCCCCAATTGTAATTTAAGAGTTGAGGCCTTTCGTTTTTATGGAATTCCACCTCCATCTTTGCCTCTGGACGAAGAAGGAGGGAGCAGAACGAGGATCATAGTCATCACCATATCAACAGTTGCCGCGACTGCAGTTCTGCTAGGCCTATTGTATGGCTCATTTTTATGGAGAAACAAGAGACGGGAGATGGATAGAAGTGAAGAGTTTCCTTTGCGAAATGGATCAGATCAACAACCAGTTTACTCACTAAGGCAACATTTTGATGAAACAAATCATGACAATGATGGAGATATGCATTACTTCAACTTTAGTACTCTAAAAGCTGCTACAGATGACTTTTCAGATGTTAATAAACTTGGAGAAGGGGGGTTTGGTCCAGTTTACAGGGGGAAGCTGACGGGTGGTGAGGAAGTAGCAGTGAAAAGACTATCAACAAAATCAAGTCAAGGACATGAAGAGTTCAAGAATGAAGCAAAGGTCATTTGGAAGCTTCAACATAAGAATCTGGTCAGGCTCTTGGGATGTTGTGTTGAAGGAGAAGAAAAACTTCTAGTCTACGAGTACATGGCAAATACTAGCCTTGATGCTTTCTTGTTTGATCCATTGAAGTGCAAACAACTTGATTTTCTCAAGCGTGAAAACATCGTCAATGGGATTGCAAGAGGAATTCTCTACCTCCATGAAGATTCTCGACTCAAAATCATCCACAGAGATTTGAAAGCAAGCAATGTACTATTAGATGAGGAGATGAACCCAAAAATATCAGACTTCGGAACTGCCAGGATATTTGGAGGCAAACAAATTGATGCCAGCACCAATAGAATAGTTGGAACATATGGTTATATGGCACCAGAGTACGCTATGGAGGGAGTTTTCTCAGTTAAGTCCGATGTATACAGTTTCGGAGTTCTTATGCTCGAAGTGATGAGCGGGAGAAAAAACATTGGTTTTCTGAACATGGACAGAGCACAGAACCTTCTGTCATATGCGTGGGAGCTATGGAGTGAAGGAAGAGCAGAGGAAATGATAGACGAGAACTTGAGTGGAGAATGTCCTGAGAGTGAGGCTGTAAAATGGATCCACATAGGGTTGTTGTGTGTGCAAGAAGATCCTAACATCAGGCCTACCATGTCAATGGTTGTTTTAATGCTTGGAAGCAAATCGATTCAGCTTCCTCAGCCATCAAAACCTCCATTTCTTACAAGTAGAGGGTCTCTAAGTAGATATCAATTTTCAACAACTGAAACAAGAACAGGGTTACACACCACAGATCAGTCGTCTACTAGTAGATTTTGGATAAAAATTTTCAATCTCGAAGATGATGATGCTATGTATGCTTTAAGATATTTCAATCATCTGTTTTTATCTCTAAAACAAAAAAGTTCGTTTCTTTTTCTGCTTTCCCAAACCAAAATCATGTTCTGTTTCCTCGATTACAGATCTTTGCCAATTTCGTTGCTAATCCTGATTTCAATCTTTGGGCTCAGTCACTCCCATCATTTCGAACCCAAATATAGGTTCCACATCTGTTCAGCGCCAAGTAATAACATAACAAACGCTAATCTGGGTTCGAACCTCAGTGGCTTACTGAGTTCCCTATCAGAAGCTTCATCTGACACCTTCTACAGTATGACTTCCAATGGAATGTACGGTGTCGTCCTTTGTCGAGGGGATATTAACAGCGATAACTGTCATAGTTGTGTCAGTGCCGCAAGCAAAGAATTAAGCATTCGATGCTCTTTAAGAGTTAACGGCATAATATGGTACGATGAATGTATGCTGAGGTACTCAGACAAGAACTTCTTGGGTACTGTAGAGATGTCGCCAAGATTCCTCATGGGCGATTCTGGGAACCAGACATCGCCAGATGATCGCAACATTGACGGGCCTGATTTTTTGTCTCAGATGGCCAGTGAAGCTGCAGGGTTAGAGATGATGTTCAAGGCAAACAAGTTGGATAACCGTGGGACACGCTATGGACTGGTTCAGTGCACAAGGGATCTTAACAGTAGCCAGTGTGGTACATGTTTGACGGCTCTGCTGGAGGAGATCAAGCTGGTTTACAAAGGGAGAGTGGGGTGGAGAATATTGAGCCCAAGTTGTAGCATAACGTATGAGCAATATCTTTTCTATCAGCTACCAGATTCGCCTCCAGGATTAAGTGCGAAAATGATTGCAATAATCACTGTATCAACAATTGCTGCAGTAGCAATTTTTGCTATTCTATTGTATTGCTTACTTTTGTCCAGGAAGAGACGACAGGATATGGACACAGGTGAACAAGTTCTGTTGCGAAATTTGGGAGATGCAAAGTCCGCAGAATTGATGAAGCAAGATTTGCATACAAGAGATAGAGACAATGATGAAGACATGCACTACTTCAGTTTCATCACCCTACAGGCTGCCACAAACAACTTTGCAGATGCAAATAGGCTTGGAGAAGGTGGTTTTGGTCCGGTTTTCAAGGGAAAGTTGACAAATGGGGAAGAAATAGCTGTAAAAAGACTGTCCGTGAAGTCGAGTCAAGGTCACGATGAGTTCAAGAATGAAGTAATGGTCATAATGAAGCTTCAACACAAAAATCTGGTCAGACTTTTGGGATGCTGTCTGGAGGGAGAGGAAAAGCTACTTGTCTATGAGTACATGGCAAACACTAGTCTAGATGCCTTCTTATTTGGTTTGTTTAGTTTTAATTCTCCATATGATTTTTTGGTCCATTGGAATCAAAACAAAGGATCATTAACAGGAAAGCTTATCTCCTCTGGTTCATACTGCAATGCAGATCCAGTTAAAAGCAAACAACTCAACTGGGTTAAGCGCAACAACATCATCAATGGAGTTGCAAAAGGAATTCTTTATCTACATGAAGACTCTCGGCTCAAAATTATTCATAGGGATTTGAAAGCCAGCAATGTGTTATTGGATGACGAGATGAATGCAAAGATATCAGACTTTGGAACAGCCAGAATTTTTGGAGGCAAGCAAGTTGAGGCTAGCACCAACAGAGTTGTTGGGACTTTTGGATATATGGCACCGGAATATGCAATGGAAGGAGTGTTTTCAATAAAGTCTGATGTTTACAGTTTTGGGATATTAATGTTAGAAGTGATAAGCGGAAGAAAGAACAGCGGTTTCTTCAAAGTAAACAATGCACAGAGCCTTCTATCACAGGCATGGCAACTTTGGAAGGAAGGCAGAGAAGAGGAAATGGTTGATGCGAACCTGGTTGGAGAATGCTCTTTAAGCGAAGCACTGAGATGGATCCAAATTGGTCTGCTGTGTGTCCAAGAAGATCCTAACATCAGACCAACCATGTCAATGGTTGTTCTAATGCTTGGAAGCAAATCGATTCACCTTCCCCAACCGTCGAAACCTCCATTCTTTCCGATTGGGTTTCCAATGTCTGCCAATCAATCTTCAACAACTTTACTGGGAACAGGATATCTCTCCACTCAATCTTCTACCACTGCTTCTATATAG 4146 41.53 MAIMCYLSSIFHKRIVVDVDGEEEENCQRYLSCSGSNTAHPNLNSNINFLLNSLISHASSRTFYTETSNGIHGLFLCRGDIPNETCRTCIEGASQQIKVDCASQTNGTIGFDECMLRYSVVNFFGILEMSPRILLYNSLNQSTFEDRDFVDLALVSNLVRDATNADSMFKEGEVNIAGVDQRFGLAQCTRGIDKRDCEFCLTNLVDYAKGCCLRQRGWRVLAPNCNLRVEAFRFYGIPPPSLPLDEEGGSRTRIIVITISTVAATAVLLGLLYGSFLWRNKRREMDRSEEFPLRNGSDQQPVYSLRQHFDETNHDNDGDMHYFNFSTLKAATDDFSDVNKLGEGGFGPVYRGKLTGGEEVAVKRLSTKSSQGHEEFKNEAKVIWKLQHKNLVRLLGCCVEGEEKLLVYEYMANTSLDAFLFDPLKCKQLDFLKRENIVNGIARGILYLHEDSRLKIIHRDLKASNVLLDEEMNPKISDFGTARIFGGKQIDASTNRIVGTYGYMAPEYAMEGVFSVKSDVYSFGVLMLEVMSGRKNIGFLNMDRAQNLLSYAWELWSEGRAEEMIDENLSGECPESEAVKWIHIGLLCVQEDPNIRPTMSMVVLMLGSKSIQLPQPSKPPFLTSRGSLSRYQFSTTETRTGLHTTDQSSTSRFWIKIFNLEDDDAMYALRYFNHLFLSLKQKSSFLFLLSQTKIMFCFLDYRSLPISLLILISIFGLSHSHHFEPKYRFHICSAPSNNITNANLGSNLSGLLSSLSEASSDTFYSMTSNGMYGVVLCRGDINSDNCHSCVSAASKELSIRCSLRVNGIIWYDECMLRYSDKNFLGTVEMSPRFLMGDSGNQTSPDDRNIDGPDFLSQMASEAAGLEMMFKANKLDNRGTRYGLVQCTRDLNSSQCGTCLTALLEEIKLVYKGRVGWRILSPSCSITYEQYLFYQLPDSPPGLSAKMIAIITVSTIAAVAIFAILLYCLLLSRKRRQDMDTGEQVLLRNLGDAKSAELMKQDLHTRDRDNDEDMHYFSFITLQAATNNFADANRLGEGGFGPVFKGKLTNGEEIAVKRLSVKSSQGHDEFKNEVMVIMKLQHKNLVRLLGCCLEGEEKLLVYEYMANTSLDAFLFGLFSFNSPYDFLVHWNQNKGSLTGKLISSGSYCNADPVKSKQLNWVKRNNIINGVAKGILYLHEDSRLKIIHRDLKASNVLLDDEMNAKISDFGTARIFGGKQVEASTNRVVGTFGYMAPEYAMEGVFSIKSDVYSFGILMLEVISGRKNSGFFKVNNAQSLLSQAWQLWKEGREEEMVDANLVGECSLSEALRWIQIGLLCVQEDPNIRPTMSMVVLMLGSKSIHLPQPSKPPFFPIGFPMSANQSSTTLLGTGYLSTQSSTTASI 1381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2303496 2312568 + MELO3C007357.2.1 Cme08g00372 334635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00372 1381 SUPERFAMILY Protein kinase-like (PK-like) 1011 1362 IPR011009 -
Cme08g00372 1381 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 707 1114 - -
Cme08g00372 1381 ProSiteProfiles Protein kinase domain profile. 335 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme08g00372 1381 SUPERFAMILY Protein kinase-like (PK-like) 318 634 IPR011009 -
Cme08g00372 1381 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 707 1114 - -
Cme08g00372 1381 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 631 - -
Cme08g00372 1381 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1150 1358 - -
Cme08g00372 1381 Gene3D Phosphorylase Kinase; domain 1 1002 1103 - -
Cme08g00372 1381 Gene3D Phosphorylase Kinase; domain 1 308 410 - -
Cme08g00372 1381 CDD STKc_IRAK 341 606 - -
Cme08g00372 1381 Pfam Protein tyrosine and serine/threonine kinase 1032 1332 IPR001245 GO:0004672|GO:0006468
Cme08g00372 1381 Pfam Protein tyrosine and serine/threonine kinase 339 604 IPR001245 GO:0004672|GO:0006468
Cme08g00372 1381 ProSiteProfiles Protein kinase domain profile. 1028 1350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme08g00372 1381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1184 1196 IPR008271 GO:0004672|GO:0006468
Cme08g00372 1381 Gene3D Transferase(Phosphotransferase) domain 1 1141 1341 - -
Cme08g00372 1381 Gene3D Transferase(Phosphotransferase) domain 1 411 615 - -
Cme08g00372 1381 CDD STKc_IRAK 1034 1334 - -
Cme08g00372 1381 SMART serkin_6 1028 1332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme08g00372 1381 SMART serkin_6 335 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme08g00372 1381 Pfam Salt stress response/antifungal 153 230 IPR002902 -
Cme08g00372 1381 Pfam Salt stress response/antifungal 33 119 IPR002902 -
Cme08g00372 1381 Pfam Salt stress response/antifungal 732 820 IPR002902 -
Cme08g00372 1381 Pfam Salt stress response/antifungal 869 930 IPR002902 -
Cme08g00372 1381 ProSiteProfiles Gnk2-homologous domain profile. 129 234 IPR002902 -
Cme08g00372 1381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Cme08g00372 1381 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 32 631 - -
Cme08g00372 1381 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1150 1358 - -
Cme08g00372 1381 ProSiteProfiles Gnk2-homologous domain profile. 25 123 IPR002902 -
Cme08g00372 1381 ProSiteProfiles Gnk2-homologous domain profile. 726 823 IPR002902 -
Cme08g00372 1381 Gene3D - 27 123 IPR038408 -
Cme08g00372 1381 Gene3D - 134 234 IPR038408 -
Cme08g00372 1381 Gene3D - 726 823 IPR038408 -
Cme08g00372 1381 Gene3D - 835 932 IPR038408 -
Cme08g00372 1381 ProSiteProfiles Gnk2-homologous domain profile. 829 932 IPR002902 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01865 Cme-Chr4:26366240 Cme08g00372 Cme-Chr8:2303496 1.01E-83 dispersed
Cme08g00372 Cme-Chr8:2303496 Cme08g00374 Cme-Chr8:2320685 7.30E-122 dispersed
Cme10g00543 Cme-Chr10:3464745 Cme08g00372 Cme-Chr8:2303496 3.83E-95 dispersed
Cme08g00371 Cme-Chr8:2299093 Cme08g00372 Cme-Chr8:2303496 1.90E-37 tandem
Cme08g00372 Cme-Chr8:2303496 Cme08g00373 Cme-Chr8:2313604 6.19E-115 tandem
Cme12g01459 Cme-Chr12:22307652 Cme08g00372 Cme-Chr8:2303496 4.41E-35 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65055 PF07714 PK_Tyr_Ser-Thr 1.80E-46 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00372 - - cmo:103484582 2570.04