Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00376 ATGGGAACTCCAAAAAATTTTCTCTTCCTTTGCTTCATTCTCGTATTCATGGTTGCAACCACCATTTCTCAAAGAGAAATAGTAGCCCGGTCATGTTCAAACAGCGGCAACTACACCACCAACAGCATTTACAAGCAAAATCTCGACACCCTCCTTTCCTCCATCGCCTCCAACACCGATATTGATTACGGCTTTTACAATTTCTCAGAAGGACAGCAACCCGACAGAGTTAACGCCATCGCCCTTTGCCTGGCCGATCTAACGGTGGAAGAATGCCGGAGCTGTATCCGAAATTCAACTCGAAGAATTCTAGAGGATTGCCCCAACCAGAAAGAAGCTATCGGATGGTACACCGTTTGCATGGTTCGTTACTCAAACAGATCAATATTTGGCGTTTGGGTCGACCGAGTTCTTGGGCCAACTTTTGTTTCCGGTCGGACTACGTCAGATATAGATGTTTACACTCGATCACTTAGAACTTTGTTGCAAAGACTGAGAAATGAAGCTGCGTCTGGGGATTCTAGACACAAATATGCAGTGGGTGAAATTGAAGCTACCAATTTGGATAACATATTTGGGTTTGTTCAATGTACTCCCGATTTGTCCTCTATGGATTGCAATAATTGTCTTATGAAGGCTGCTGAAAATGTTCCGAATGGAAGTACGGGAAGTTCTTATCTACACTCAGGAGTTGTTATTGGGGACACCACTGACGAAATTAGCAGTGTGGAGACAATTCAATTTGATTTTGAAACCATTAAAATTGCGACAAATGATTTCTCAAGTGAAAACAAGCTTGGACAGGGTGGATTTGGAGCTGTTTATAAGGGTAAGCTGCCTAATGGACAACGTATTGCAGTGAAGAGGCTTGCTAATAATTCACAACAAGGAGATGTTGAATTCAAAAATGAAGTTCTTTTGGTGGTAAAGCTTCAACATCGAAACTTGGTTAGGCTGTTGGGATTTTGCTTGCAGAAAACTGAAAGACTTCTCATTTATGAGTTTGTACCAAATGCCAGCCTTGACCAATTCATATTTGATTTTACGAAACGGACACTATTAGATTGGGAAAGACGATTCAAAATCATAAATGGAACTGCACGAGGACTTCTTTACCTTCATGAAGATTCTCGTCTTCGAATCATACATCGGGATCTCAAAGCTAGTAATATTTTGTTGGATGAAGAAATGAATCCAAAGATTGCTGATTTTGGTATGGCAAGATTGTTTGAAGTAGATGAAACTCAAGGCAATACAAGTAGAATTGTGGGAACTTATGGTTATATGGCTCCAGAATATTTAATGCACGGCCAATTTTCAGTTAAATCGGACGTCTTTAGCTTTGGTGTTTTGATACTTGAAATTGTGAGTGGCAAGAAAAATAATTGCTTTCGCAATGGAGAAAAGATAGAAGATCTCTCAAGCTTTGCATGGAAAAATTGGAAGGCTGGAACAACTAAAAACGTCATAGATTCAACACTTAGTGTTGGTTCAAATGTTGAAATGTTAAGATGCATTCATATTGGATTATTGTGCGTTCAAGAGAATGCAGCAGATCGTCCAACGATGGCTGCTGTGGTTCTGATGCTTAGTAGTATGTCCCTCAATCTTCCTGTACCATTAGAACCAGCATTCTTCATGCATAGTAACGTTGATGAATCCACCACACAATCAAAGATAAATCAATGGTTGGAAATGAACGAGAAGGCTAGTGATCATTCTGAAAGCGTACCCCTCCAATCTTTATCTAATGATGCTTCAATTAGTGAGCTCAATCCTCACCCAATTGGTTTCAGTCAGACACTGAGGAGCTTGTTGGTTGGACTACGAAACGCCTCCGCCTCAGGGACTTCTACTCGAATCTCTGCGGCCGGTCCATTGGCAGTGTCTAGTCCCAGTGTGGACACGATATACGCTGTTATTGATTGTTTTCCTGACTTGTCATCGTTGGATTCCGGACAGCAACCCAACAGAGTTAACGGCATCGCCTTTTGCCTGGCCGGTCTAACGGTGGACGAATGCCGGAGCTGTATCCAAAATTCAACTCGAAGGATTCTAGAGGATTGCCCCAACCAGAAAGAAGCTATCGGATGGTACACCGTTTGCATGGTTCGTTACTCAAATAGATCAATATTTGGCGTTTGGGTCGACCGAGTTCTTGGGCCAACTTTTGTTTCCGGTCGGATTGCGTCAGATATAGATGGTTACAATCTATCACTCGGAACTTTGTTGCAAAGTCTGAGAAATGAAGCTGCGTCTGGGGATTCTAGACACAAATTGGCAGTGGGTGAAATCAGAGCTCCCAATTTGGATAACATATTTGGGTTTGTTCAATGTACTCCGGATTTGTCCTCTGTGGATTGCAATAATTGTCTTATGAAGACTGCTGAACATATTCCGAATGGAAGAGTTGTTATTGGGGACACCACTGACGAAATTAGCAGTGTGGAGACAATTCAATTTGATTTTGAAACCATTAAAATTGCGACAAATGATTTCTCAAGTGAAAACAAGCTTGGACAGGGTGGATTTGGAGCTGTTTATAAGGGTAAGCTGCCTAATGGACAACGTATTGCAGTGAAGAGGCTTGCTAATAATTCACAACAAGGAGATGTTGAATTCAAAAATGAAGTTCTTTTGGTGGTAAAGCTTCAACATCGAAACTTGGTTAGGCTGTTGGGATTTTGCTTGCAGAAAACTGAAAGACTTCTCATTTATGAGTTTGTACCAAATGCCAGCCTTGACCAATTCATATTTGATTCTAGGAAACGGACACTATTAGATTGGGAAAGACGATTCAAAATCATAAATGGAACTGCACGAGGACTTCTTTACCTTCATGAAGATTCTCGCCTTCGAATCATACATCGGGATCTCAAAGCTAGCAATATTTTGTTGGATGAAAAAATGAATCCAAAGATCGCTGATTTTGGTATGGCAATATTGTTTGAAGTAGATGAGACTCAAGGCAGTACAAGTAGAATTGTGGGAACTCATGGCTATATGGCTCCAGAATATTTAATGCAAGACCAGTTTTCAGTTAAATCGGATGTCTTTAGCTTTGGTGTTTTAATGCTTGAAATCCTAGACTTCGCCAAATCTTCATGTCAAGACGCCGGCAACAGCAGCACCCTCAACAGCACTTATCAGAAAAATCTAGAAACCCTACTTTCGTCCGTGTCCTCGGATCCCCAGTTGATAAATTACGGCTTTTACAATCTCAATGTCGGAGAGGAGCCAGAGAGAGTGAACGTCATCGCCCTCTGCATTGGAGATACTTCAACAGATAGATGCAGGATTTGCGTGGATGAATCGAGTCGGAAGATTTTAGAGGTTTGCCCTAGCGAGGAGGGCGGAATCGTGTGGTACGATCAGTGTTTACTTGGGTACTCGGGAAGTGGGAATTACGATTGGGGCAGGGAATCGATTTTCAACGGCAATAAGGCGTCGACGAATTCGGATGAGTTCATTGAGGCAGTGAAGAGATTGATGGAGAGATTAAGAGTAGAGGCTGCTTTAGGGAATTCGACACGGAAAATGGGGAAAGGGGAGATATCGGCCGGCAATGAAACTGTGTATGGGCTTGTGCAGTGTATTCCCGACATGTCGTCCGCGGATTGCGACAAGTGCATTGGTGAGGGGGTGGTTGTGTTTTGCGATATGAGAATTATATTTTCCTTAATTCGACGGCTAATGCTTCTCCCTCCTCATCTCCTCTACCAGTGCCAACTGCCGGGAAAGTTGTGTAATGGACAAAGCATAGCAGTGAAGAGGCTCTCAAGAGATTCAAATCAAGGAGACCTGGAATTCAAAAATGAAGTTCTTGTAATGGCCAAGCTTCAACACAGGAACTTAGTTAGGCTGCTAGGGTTTAGCTTGGATGGAAATGAAAGGCTTCTCATCTATGAGTTTCTACCAAATGCCAGTCTTGATCACTTCATCTTCGATCTTGTCAAACGCACAATTTTGGATTGGAAAACACGATACAAAATTATAAACGGTATTGCTCGAGGATTGTTATACCTCCATGAAGATTCCCGTATTCGAATAGTTCATCGTGACCTTAAAGCTAGCAATATTTTGTTGGATGGAAAAATGAATCCTAAAATTGCAGACTTTGGCATGGCAAGGTTATTCAAATTAGACGAGACTCGAAGGCATACCCAGAGAATTGTGGGAACTTATGGTTATATGGCTCCAGAATATGTATTTCACGGACAATTCTCACCAAAATCAGATGTGTTTAGTTTTGGAGTTCTAATTCTTGAGATTATAAGTGGCCAGGAAAATACCAATTTTTGCATCGACAATGGAGAGCAAGACATAGATCTTTTGAACTTTACATGGAAAAGTTGGAGAGAAGGAAAACCTGAAAATGTAATAGATGAGGCACTAATATCAGGTACCAACGTTGAAATGTTAAGATGTATTCAAATTGGATTATTATGTGTTCAAGAGAACGAGGTGGATCGACCAACAATGGCTGCGATAGTTTTGATGCTAAACAACTTCCCTCTCACACTCTCTCTTCCCTCTAAACCTGCCTTCCTTTTGTACAGTAATAATGACGTCTACTCAAATACACATAATTTCCAAACTGCTACTCTTCCAGCTTCACAAAATGGTATGTCCGTTTCTGATTTTTATGCTCGTTAA 4656 41.43 MGTPKNFLFLCFILVFMVATTISQREIVARSCSNSGNYTTNSIYKQNLDTLLSSIASNTDIDYGFYNFSEGQQPDRVNAIALCLADLTVEECRSCIRNSTRRILEDCPNQKEAIGWYTVCMVRYSNRSIFGVWVDRVLGPTFVSGRTTSDIDVYTRSLRTLLQRLRNEAASGDSRHKYAVGEIEATNLDNIFGFVQCTPDLSSMDCNNCLMKAAENVPNGSTGSSYLHSGVVIGDTTDEISSVETIQFDFETIKIATNDFSSENKLGQGGFGAVYKGKLPNGQRIAVKRLANNSQQGDVEFKNEVLLVVKLQHRNLVRLLGFCLQKTERLLIYEFVPNASLDQFIFDFTKRTLLDWERRFKIINGTARGLLYLHEDSRLRIIHRDLKASNILLDEEMNPKIADFGMARLFEVDETQGNTSRIVGTYGYMAPEYLMHGQFSVKSDVFSFGVLILEIVSGKKNNCFRNGEKIEDLSSFAWKNWKAGTTKNVIDSTLSVGSNVEMLRCIHIGLLCVQENAADRPTMAAVVLMLSSMSLNLPVPLEPAFFMHSNVDESTTQSKINQWLEMNEKASDHSESVPLQSLSNDASISELNPHPIGFSQTLRSLLVGLRNASASGTSTRISAAGPLAVSSPSVDTIYAVIDCFPDLSSLDSGQQPNRVNGIAFCLAGLTVDECRSCIQNSTRRILEDCPNQKEAIGWYTVCMVRYSNRSIFGVWVDRVLGPTFVSGRIASDIDGYNLSLGTLLQSLRNEAASGDSRHKLAVGEIRAPNLDNIFGFVQCTPDLSSVDCNNCLMKTAEHIPNGRVVIGDTTDEISSVETIQFDFETIKIATNDFSSENKLGQGGFGAVYKGKLPNGQRIAVKRLANNSQQGDVEFKNEVLLVVKLQHRNLVRLLGFCLQKTERLLIYEFVPNASLDQFIFDSRKRTLLDWERRFKIINGTARGLLYLHEDSRLRIIHRDLKASNILLDEKMNPKIADFGMAILFEVDETQGSTSRIVGTHGYMAPEYLMQDQFSVKSDVFSFGVLMLEILDFAKSSCQDAGNSSTLNSTYQKNLETLLSSVSSDPQLINYGFYNLNVGEEPERVNVIALCIGDTSTDRCRICVDESSRKILEVCPSEEGGIVWYDQCLLGYSGSGNYDWGRESIFNGNKASTNSDEFIEAVKRLMERLRVEAALGNSTRKMGKGEISAGNETVYGLVQCIPDMSSADCDKCIGEGVVVFCDMRIIFSLIRRLMLLPPHLLYQCQLPGKLCNGQSIAVKRLSRDSNQGDLEFKNEVLVMAKLQHRNLVRLLGFSLDGNERLLIYEFLPNASLDHFIFDLVKRTILDWKTRYKIINGIARGLLYLHEDSRIRIVHRDLKASNILLDGKMNPKIADFGMARLFKLDETRRHTQRIVGTYGYMAPEYVFHGQFSPKSDVFSFGVLILEIISGQENTNFCIDNGEQDIDLLNFTWKSWREGKPENVIDEALISGTNVEMLRCIQIGLLCVQENEVDRPTMAAIVLMLNNFPLTLSLPSKPAFLLYSNNDVYSNTHNFQTATLPASQNGMSVSDFYAR 1551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2339329 2353577 - MELO3C007367.2.1 Cme08g00376 334639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00376 1551 ProSiteProfiles Gnk2-homologous domain profile. 603 711 IPR002902 -
Cme08g00376 1551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1350 1362 IPR008271 GO:0004672|GO:0006468
Cme08g00376 1551 Gene3D Transferase(Phosphotransferase) domain 1 909 1107 - -
Cme08g00376 1551 Gene3D Transferase(Phosphotransferase) domain 1 336 537 - -
Cme08g00376 1551 Gene3D Transferase(Phosphotransferase) domain 1 1305 1507 - -
Cme08g00376 1551 ProSiteProfiles Protein kinase domain profile. 260 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme08g00376 1551 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Cme08g00376 1551 SMART serkin_6 1218 1507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme08g00376 1551 SMART serkin_6 833 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme08g00376 1551 SMART serkin_6 260 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme08g00376 1551 ProSitePatterns Protein kinases ATP-binding region signature. 839 861 IPR017441 GO:0005524
Cme08g00376 1551 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 10 222 - -
Cme08g00376 1551 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 814 1041 - -
Cme08g00376 1551 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 241 569 - -
Cme08g00376 1551 ProSiteProfiles Protein kinase domain profile. 1225 1505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme08g00376 1551 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 651 802 - -
Cme08g00376 1551 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1246 1530 - -
Cme08g00376 1551 SUPERFAMILY Protein kinase-like (PK-like) 810 1050 IPR011009 -
Cme08g00376 1551 CDD STKc_IRAK 266 533 - -
Cme08g00376 1551 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 222 - -
Cme08g00376 1551 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 814 1041 - -
Cme08g00376 1551 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 241 569 - -
Cme08g00376 1551 ProSiteProfiles Gnk2-homologous domain profile. 136 248 IPR002902 -
Cme08g00376 1551 Gene3D Phosphorylase Kinase; domain 1 1238 1304 - -
Cme08g00376 1551 Pfam Salt stress response/antifungal 1036 1131 IPR002902 -
Cme08g00376 1551 Pfam Salt stress response/antifungal 150 223 IPR002902 -
Cme08g00376 1551 Pfam Salt stress response/antifungal 597 708 IPR002902 -
Cme08g00376 1551 Pfam Salt stress response/antifungal 32 126 IPR002902 -
Cme08g00376 1551 Pfam Salt stress response/antifungal 1149 1215 IPR002902 -
Cme08g00376 1551 Pfam Salt stress response/antifungal 734 801 IPR002902 -
Cme08g00376 1551 Pfam Protein tyrosine and serine/threonine kinase 263 528 IPR001245 GO:0004672|GO:0006468
Cme08g00376 1551 Pfam Protein tyrosine and serine/threonine kinase 836 1050 IPR001245 GO:0004672|GO:0006468
Cme08g00376 1551 Pfam Protein tyrosine and serine/threonine kinase 1251 1498 IPR001245 GO:0004672|GO:0006468
Cme08g00376 1551 ProSiteProfiles Gnk2-homologous domain profile. 1030 1135 IPR002902 -
Cme08g00376 1551 ProSitePatterns Protein kinases ATP-binding region signature. 266 288 IPR017441 GO:0005524
Cme08g00376 1551 ProSiteProfiles Gnk2-homologous domain profile. 718 828 IPR002902 -
Cme08g00376 1551 ProSiteProfiles Gnk2-homologous domain profile. 1137 1245 IPR002902 -
Cme08g00376 1551 SUPERFAMILY Protein kinase-like (PK-like) 1249 1531 IPR011009 -
Cme08g00376 1551 SUPERFAMILY Protein kinase-like (PK-like) 248 565 IPR011009 -
Cme08g00376 1551 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 651 802 - -
Cme08g00376 1551 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1246 1530 - -
Cme08g00376 1551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 954 966 IPR008271 GO:0004672|GO:0006468
Cme08g00376 1551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 381 393 IPR008271 GO:0004672|GO:0006468
Cme08g00376 1551 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1039 1219 - -
Cme08g00376 1551 CDD STKc_IRAK 1246 1504 - -
Cme08g00376 1551 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1039 1219 - -
Cme08g00376 1551 Gene3D - 24 128 IPR038408 -
Cme08g00376 1551 Gene3D - 1141 1218 IPR038408 -
Cme08g00376 1551 Gene3D - 723 805 IPR038408 -
Cme08g00376 1551 Gene3D - 140 234 IPR038408 -
Cme08g00376 1551 Gene3D - 650 710 IPR038408 -
Cme08g00376 1551 ProSiteProfiles Protein kinase domain profile. 833 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme08g00376 1551 Gene3D Phosphorylase Kinase; domain 1 235 335 - -
Cme08g00376 1551 Gene3D Phosphorylase Kinase; domain 1 806 908 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g00376 Cme-Chr8:2339329 Cme12g01450 Cme-Chr12:22242891 9.02E-21 dispersed
Cme08g00934 Cme-Chr8:6159582 Cme08g00376 Cme-Chr8:2339329 3.71E-22 dispersed
Cme08g00375 Cme-Chr8:2331578 Cme08g00376 Cme-Chr8:2339329 2.63E-111 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65059 PF07714 PK_Tyr_Ser-Thr 7.30E-47 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00376 - - cmo:103485324 3034.97