Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00485 ATGAAGAAGGCTTGTGATATTATTGATGAAGTTATTGCCAACTTGATGGCAGTGAAACGAGAGCGTTTGCAACGAGATCGAGAGGTGAAAGAAGAACAAGATCATGGTGCTGATTTGATCACATGGTATATGGTGAATGAACACGACGAGATCGACTGCAACGACAAGTTCTTGAGAGACACGGTCTTGAATTTCATGATCGCCGGTCGCGATGCACTCAGCGTAACTCTCTCCTGGCTTTTCTTCGTCCTCTCAAAAAATCCTACCATAGTAGCAAAAATCCGAGAAGAGTTGAAAGGCATACCAACGATCTCGCAAAACGAGCAAGAACAGCAACAAAAACCAAGAGTATTCACCATTCAAGAGCTCAACAACTTGGTTTACTTGCATGGAGCCTTATGCGAAACCCTTCGTCTCTATCCACCGATTGCATTCGAGCACAAATCTCCAGTAGAAGCTGAGACGCTCCCGAGCGGCCACCACGTGAGACCTGGGATGAGGATACTCTTCTCGTTGTATGCATTGGGAAGAATGAGGTCTGTTTGGGGAGAAGATTGTGAAGAATTCAAACCGGAGAGATGGATTTCGGATAAAGGGACGATCAAGAGAGAGCCATCTTATAAGTTCTTCAGTTTCAATGCGGGGCCAAGGACTTGCCTAGGGAAAGGAGTGGCATTTTCACAATTGAAGATTGTTTCAGCTGCCATTATTCATAATTATGACATTGAAGCTGTTGATGAAGATAGTAACAATGCTGTTGCTCCAGCTGCTTCTGTCATACTTCACATGAAAAGTGGATTTAGGGTTAAGGTTACTAAGAGATAA 825 43.88 MKKACDIIDEVIANLMAVKRERLQRDREVKEEQDHGADLITWYMVNEHDEIDCNDKFLRDTVLNFMIAGRDALSVTLSWLFFVLSKNPTIVAKIREELKGIPTISQNEQEQQQKPRVFTIQELNNLVYLHGALCETLRLYPPIAFEHKSPVEAETLPSGHHVRPGMRILFSLYALGRMRSVWGEDCEEFKPERWISDKGTIKREPSYKFFSFNAGPRTCLGKGVAFSQLKIVSAAIIHNYDIEAVDEDSNNAVAPAASVILHMKSGFRVKVTKR 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2998746 3001470 + MELO3C007477.2.1 Cme08g00485 334748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00485 274 PRINTS E-class P450 group I signature 57 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00485 274 PRINTS E-class P450 group I signature 77 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00485 274 PRINTS E-class P450 group I signature 209 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00485 274 PRINTS E-class P450 group I signature 219 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00485 274 PANTHER ALKANE HYDROXYLASE MAH1-LIKE 2 271 - -
Cme08g00485 274 Gene3D Cytochrome P450 1 274 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00485 274 PRINTS P450 superfamily signature 210 219 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00485 274 PRINTS P450 superfamily signature 131 142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00485 274 PRINTS P450 superfamily signature 219 230 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00485 274 PRINTS P450 superfamily signature 68 85 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00485 274 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 212 221 IPR017972 GO:0005506|GO:0016705
Cme08g00485 274 PANTHER CYTOCHROME P450 2 271 - -
Cme08g00485 274 Pfam Cytochrome P450 1 257 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00485 274 SUPERFAMILY Cytochrome P450 2 274 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g00485 Cme-Chr8:2998746 Cme08g00490 Cme-Chr8:3027202 1.07E-111 dispersed
Cme08g00484 Cme-Chr8:2994027 Cme08g00485 Cme-Chr8:2998746 6.07E-134 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00485 - - cmo:103484693 554.673