Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00490 ATGGCTTCCATAAGCTTTCTAGAAATCCTTCTCCCTTTCATACCCTTTCTGTTAGTCCTTATTTTTCTATCTGTAAAGTGGAAATATAATGAACTTCCTTGGAATTTGCCTTTTTTCGGAATGACTCTCACTATCCTCTGCAATTTGCATAGAATTCAAGACCATTTCACTCATATTTTACGTCTTTCGTCTTCCACTTTCTTTTTCAAAGGTGCTTGGTTTGCTGATCTTGATTTCTTCTTTACATCCGACCCTTCAAACATCCACCATATTTTGAGCACCAACTTTGAGCGATACCCCAAAGGCCCTGATTTCAAGTACATCTTTGAAATTTTGGGAGATGGGATTTTCAATTCTGATTCTGATGTTTGGAAAAACCTACGAAAAACTGCTCATTCCTTGGTCCATGATCACAAATATCTTCAATTCGTGGAGAAAATTACTTTGAAGAAAGTGAAATCTGGGCTTGTTCCTGTTCTTCAAACTGCTTGTGAAAATGGGTCAGTGTTGGATTTGCAAGATTTGTTTCAAAGGTTCTCTTTTGATTCAACTTGTATGTTTGTCACTGGCTTTGACCTTCAAAGTTTATCTCTTGAATTACCTGAAGTTCCTTTTTCCAAGGCCATGGATGATGCAGAGGAAGTCATTTTTCTCCGACATTTTATTCCTAAGAAAATATGGAAATTTCAGAACAAACTCCAGATTGGACCGCCCATGAGGATGAAGCAAGCTTGGGATACCATAGATGAAACCGTCGGTAAATTGATAGCCTCCAAAAGGGAGAGCTTGCAAAATCAAATGAAAGAAGAGGGTGATGAGCAGACAGAAGGAGTCGATTTGATTACATCATATATTACAAGTAGTATAGACAACGATGATGATAAGTTTCTGAGAGACACCGTTTTAAATTTCATGATCGCAGGGAGAGATACTCTGAGTTCAGCTCTCTCTTGGTTTTTCTTTTGTCTTTCGAACAATCCAACTGTCATAGAAAAGATCAGAGAAGAGCTCAAACTAACGATTCCAACAGACGAACCTCATGATCAATGGCGGATATTTTCGATTGATGAGTTGAAGAAGCTAGTTTATTTTCATGGGGCTTTGTGTGAAGCACTTAGACTATATCCACCAGTTCCATTTCAACACAAGGTAGCTACGCAACACGATAAACTCCCAAGTGGTCATCACATAAAACCGAAAACAAAGATTGTGTTTTCATTATATGCATTGGGAAGAACGAGTGAAGTGTGGGGGAAAGATTGCTTGGAGTTTAAGCCAGAGAGATGGATTTCAGAGAAGGGAAGTATCAAACATGTGCCATCTTATAAATTTTTGGCATTTAATGCAGGGCCAAGAACTTGTTTGGGGAAAGAAGTGGCTTTTACTGAGATGAAAATAGTTGCAGCTACCATTATTCATAACTACAACATCATTCAACAAATAGGGCATAAAGTTGTTCCAAATCCTTCCATCATTCTTCATATGAAACATGGATTCAAGGTCAATGTTACAAAGAGATGGTAA 1524 37.99 MASISFLEILLPFIPFLLVLIFLSVKWKYNELPWNLPFFGMTLTILCNLHRIQDHFTHILRLSSSTFFFKGAWFADLDFFFTSDPSNIHHILSTNFERYPKGPDFKYIFEILGDGIFNSDSDVWKNLRKTAHSLVHDHKYLQFVEKITLKKVKSGLVPVLQTACENGSVLDLQDLFQRFSFDSTCMFVTGFDLQSLSLELPEVPFSKAMDDAEEVIFLRHFIPKKIWKFQNKLQIGPPMRMKQAWDTIDETVGKLIASKRESLQNQMKEEGDEQTEGVDLITSYITSSIDNDDDKFLRDTVLNFMIAGRDTLSSALSWFFFCLSNNPTVIEKIREELKLTIPTDEPHDQWRIFSIDELKKLVYFHGALCEALRLYPPVPFQHKVATQHDKLPSGHHIKPKTKIVFSLYALGRTSEVWGKDCLEFKPERWISEKGSIKHVPSYKFLAFNAGPRTCLGKEVAFTEMKIVAATIIHNYNIIQQIGHKVVPNPSIILHMKHGFKVNVTKRW 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3027202 3029238 + MELO3C007482.2.1 Cme08g00490 334753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00490 507 Pfam Cytochrome P450 70 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00490 507 PANTHER CYTOCHROME P450 12 506 - -
Cme08g00490 507 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00490 507 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00490 507 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00490 507 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00490 507 SUPERFAMILY Cytochrome P450 26 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00490 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Cme08g00490 507 PANTHER ALKANE HYDROXYLASE MAH1-LIKE 12 506 - -
Cme08g00490 507 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00490 507 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00490 507 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00490 507 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00490 507 Gene3D Cytochrome P450 24 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g00485 Cme-Chr8:2998746 Cme08g00490 Cme-Chr8:3027202 1.07E-111 dispersed
Cme08g00488 Cme-Chr8:3010978 Cme08g00490 Cme-Chr8:3027202 0 dispersed
Cme08g00490 Cme-Chr8:3027202 Cme01g02420 Cme-Chr1:32482869 2.49E-116 dispersed
Cme08g00489 Cme-Chr8:3017737 Cme08g00490 Cme-Chr8:3027202 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00490 - - csv:101204712 940.643