Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme08g00510 | ATGGGAATCGCAAAAGGTCCATTAATTTTGTCCAATAAGGCAACTAGTTGTGCCAATTCTTCTATGTCCCACGATTATCATCATCAAGGAATCTTCACCTTCTCTAATGCCACCTTTGACAAATCCAATCCCTCCTCCCTCCCCGCCCAACACATCCGCCCTGACAAGCTCCGTCTTGAATCTTTCTCCGACTCCATCCCCCCGCCACCATCCCACCTCGTCGGAATAGACGAACACCATCACCAACAACAACTTCATCATGTCTATGCCTCCCCATCTAGTGGGGGGACCATGTTATCCGACATGTTCAATTTCCCTCCCACTACTCCCTCCGCCGCGGCTACTACGGTCGACTTCTCCGACAATTTCCGAACTTTACGCCCCCCCAACTCGGCCTCGGCCATGCAACTTTTCTTGATGAACCCTCCTCCACCACCACAAGCGCAACCACGATCCCCTTCGCCACCCTCGACTTCCTCCACTCTCCACATGCTCCTCCCGAACCCACCTGCGAACCCTCTCCAGGGTTTCGAAGGTGGGGTTGGCGTCGGAGACCAAACGACGGCTTTTGGGCAATTCGCTGTCGTCGAAAGTCAAGGTCTTTCACTCTCACTTCACTCCTCTTCCTTACAACACTTGGAGGACGGTGCTGTTGCGAAAGCGGATGAATTACGAATTAGGGATGGTGGGATTTTGTATAATTATAACAACAACAATCAAGTCCATGGTGATGGAGGAAGTGGATCAACATCCTCAATTTTGCAATATTCTTTTAGGAATAATGAGAATTCTCCTCATAGCTTTCAAGCTAATTCACAAATAATGAATAATCCCAATAACCATCAAGTTCAAATTGGATTTGGGTCATCTTTAGGAGTTGTCAATGTGTTGAGGAATTCAAAATATGTCAAACCTGCACAAGAATTGCTTGAGGAGTTTTGCAGTGTTGGGAAAGTTCAATTGAAGAAAAACAAGTTCAATATTAAACCAAACCCCAATACTGAATCCGCTACCACCGCCACTACTTCCGCCGCCGCTACCGGTGGCTCGACATCAAAAGATCAACCTCCCTTATCGGCTGCTGACAGAATTGAACATCAACGGAGAAAGGTCAAACTATTGTCCATGCTTGATGAGGTGGAACGCAGATATAACTTATATCGAGAGCAAATGCAAATGGTGGTCAACTCGTTCGACCTAGTGATGGGGTTCGGGGCAGCAGCGCCGTACACGACGTTGACACAGAAGGCAATGTCGAGGCACTTTCGGTGCTTGAAAGACGCAATAGCGGAGCAGTTAAAGCAGAGCTACGAGGCGTTGGGGGAGAAAGGAGGGAACGGAGGGTCTGGAATAACGAAAGGAGAGACACCAAGATTGAAACTTCTTGAACAAAGCCTTAGGCAACAAAGGGCTTTCCATCAAATGGGGATGATGGAACAAGAAGCTTGGAGACCACAGCGTGGTCTTCCTGAACGATCTGTCAACATTCTCAGAGCTTGGCTTTTCGAGCATTTTCTTCATCCGTACCCCAGCGACGCAGACAAGCTTCTGTTAGCTCGACAGACTGGTTTGTCCAGAAATCAGGTTTCAAATTGGTTCATTAATGCAAGAGTTCGGTTGTGGAAACCTATGGTGGAAGAAATGTACCAACTTGAAGGCAAAGTCGATACAGATCAACAATCACAGGAGGATACCCCACAAAATAACAACAACAACAACAACAATAATAATAAAACACAAAACAATGCCATTACAAATCCACAAAATCCAACCACCGCAGCCGTGGAAGAAGTAGCAGCGGAGTTCGCGGCGGGGCATGACTACTCCGATTTGCATGATGTGTGGCGACACGGAAGTAGTGGATCAGATCATCATCAACAACATTATGGGACCATGTCTGAGGATGTTACTGCGGCGGCTGACATGAATCCTGGACCAACACTTATACGATTTGGGACCACGAACACGGCCACCGGTGACGTGTCCCTCACGTTAGGCCTCCGCCATGCCGGAAACACCTCCGCCGCCGCTGCCGTGGATAATCCTTCTTTCTCTCTACGTGACTTTGGTCAGTCTTAA | 2079 | 48.05 | MGIAKGPLILSNKATSCANSSMSHDYHHQGIFTFSNATFDKSNPSSLPAQHIRPDKLRLESFSDSIPPPPSHLVGIDEHHHQQQLHHVYASPSSGGTMLSDMFNFPPTTPSAAATTVDFSDNFRTLRPPNSASAMQLFLMNPPPPPQAQPRSPSPPSTSSTLHMLLPNPPANPLQGFEGGVGVGDQTTAFGQFAVVESQGLSLSLHSSSLQHLEDGAVAKADELRIRDGGILYNYNNNNQVHGDGGSGSTSSILQYSFRNNENSPHSFQANSQIMNNPNNHQVQIGFGSSLGVVNVLRNSKYVKPAQELLEEFCSVGKVQLKKNKFNIKPNPNTESATTATTSAAATGGSTSKDQPPLSAADRIEHQRRKVKLLSMLDEVERRYNLYREQMQMVVNSFDLVMGFGAAAPYTTLTQKAMSRHFRCLKDAIAEQLKQSYEALGEKGGNGGSGITKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKLLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQLEGKVDTDQQSQEDTPQNNNNNNNNNNKTQNNAITNPQNPTTAAVEEVAAEFAAGHDYSDLHDVWRHGSSGSDHHQQHYGTMSEDVTAAADMNPGPTLIRFGTTNTATGDVSLTLGLRHAGNTSAAAAVDNPSFSLRDFGQS | 692 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 3146484 | 3152461 | + | MELO3C007500.2.1 | Cme08g00510 | 334773 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme08g00510 | 692 | Coils | Coil | 370 | 397 | - | - | |
Cme08g00510 | 692 | SUPERFAMILY | Homeodomain-like | 484 | 551 | IPR009057 | - | |
Cme08g00510 | 692 | MobiDBLite | consensus disorder prediction | 326 | 362 | - | - | |
Cme08g00510 | 692 | MobiDBLite | consensus disorder prediction | 560 | 589 | - | - | |
Cme08g00510 | 692 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 74 | 675 | - | - | |
Cme08g00510 | 692 | SMART | HOX_1 | 483 | 547 | IPR001356 | GO:0003677 | |
Cme08g00510 | 692 | MobiDBLite | consensus disorder prediction | 326 | 357 | - | - | |
Cme08g00510 | 692 | Pfam | Homeobox KN domain | 500 | 539 | IPR008422 | GO:0003677|GO:0006355 | |
Cme08g00510 | 692 | MobiDBLite | consensus disorder prediction | 139 | 153 | - | - | |
Cme08g00510 | 692 | Gene3D | - | 486 | 548 | - | - | |
Cme08g00510 | 692 | MobiDBLite | consensus disorder prediction | 135 | 164 | - | - | |
Cme08g00510 | 692 | Pfam | Associated with HOX | 296 | 430 | IPR006563 | - | |
Cme08g00510 | 692 | MobiDBLite | consensus disorder prediction | 555 | 589 | - | - | |
Cme08g00510 | 692 | PANTHER | BEL1-LIKE HOMEODOMAIN PROTEIN 2 | 74 | 675 | - | - | |
Cme08g00510 | 692 | CDD | homeodomain | 483 | 544 | IPR001356 | GO:0003677 | |
Cme08g00510 | 692 | ProSiteProfiles | 'Homeobox' domain profile. | 480 | 543 | IPR001356 | GO:0003677 | |
Cme08g00510 | 692 | SMART | prehox3 | 291 | 431 | IPR006563 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme08g00510 | Cme-Chr8:3146484 | Cme11g00313 | Cme-Chr11:3310166 | 2.94E-161 | dispersed | |
Cme08g00510 | Cme-Chr8:3146484 | Cme04g02323 | Cme-Chr4:30173085 | 1.37E-83 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
41770 | PF07526 | POX | 5.60E-49 | No_clan | Cme | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme08g00510 | - | - | csv:101202767 | 1191.02 |