Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00534 ATGGCCGATTTCCAGACCTCGACTCAACGAGCCAAATGGATCTTGTCTCCTCAGGAGCTGGGTTGCAGGTACAAAGCTGCTAACCAGAGAGCAATTGAAGCTCTGGAGAAGTTTGGTGCATCACTTATGGAAGTCGATGCTGACGGATCATTGTCGTATCCAGACCCCCAGATAAATTTGAAAGATCATGCTGACAAACATTCTCGCCCCAAATCATTAAGTATTGAAGAAGAGCAATTTATGCGAGTATTTTATGAAAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGGCAACAGCTCTAATATATTTTAAAAGATTCTACCTGCAATGGTCTGTGATGCAACATAATCCAAAAAATGTGATGTTAACCTGCATTTATGCAGCTTGTAAGATAGAAGAAAATCATGTCTCGGCTGAGGAGCTTGGTAAGGGGATTTCACAGGATCATCAAATTATTCTCAATTACGAGATGATAGTTTATCAGAGTCTGGAATTTGATCTTATTGTTTATGCACCTTATCGATCAGTTGAAGGATATGTCAACGATATTGAGGAACTCTTTCATGAGAATGCTGAAATGCTTCAAATGCTGAAGGCAACAGCATCATTGGATGTTGATAAAATTATGTTAACAGATGCCCCACTTCTCTTCCCCCCTGGGCAGTTGGCATTGGCTGCATTGCGCAGATCAAATGAAGTTCATGGAGTTATTGACTTTAATAGCTACCTCGACAGTATCCTCTCTCGCCAGAATTCCACGCATACAATTTCTGAGCTCTATGAGGGTATTAATGCAATTGAATCGTTGGTTAATCGGTATGCTTTCCCTTCAGAAAAGGATTTAAAGCACATCAACCGAAAATTAAAATCTTGCTGGGGACTAGGCTCAAACGACGAGAGTAAGAAAAGGGAGAAGAAATCAAAGCACAAATCAAAGAGAAGTTCGAATGAAATGCAAAATAGGCCTTTGCACAATTAG 999 39.64 MADFQTSTQRAKWILSPQELGCRYKAANQRAIEALEKFGASLMEVDADGSLSYPDPQINLKDHADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVNDIEELFHENAEMLQMLKATASLDVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFNSYLDSILSRQNSTHTISELYEGINAIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKRSSNEMQNRPLHN 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3334267 3341563 + MELO3C007526.2.1 Cme08g00534 334797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00534 332 PANTHER CYCLIN 1 328 IPR043198 GO:0006357|GO:0016538
Cme08g00534 332 Pfam Cyclin C-terminal domain 179 277 IPR031658 -
Cme08g00534 332 SUPERFAMILY Cyclin-like 66 176 IPR036915 -
Cme08g00534 332 MobiDBLite consensus disorder prediction 301 332 - -
Cme08g00534 332 Pfam Cyclin, N-terminal domain 68 174 IPR006671 -
Cme08g00534 332 Gene3D - 63 175 - -
Cme08g00534 332 CDD CYCLIN 81 167 IPR013763 -
Cme08g00534 332 Gene3D - 177 279 - -
Cme08g00534 332 SUPERFAMILY Cyclin-like 179 300 IPR036915 -
Cme08g00534 332 PANTHER CYCLIN-H 1 328 - -
Cme08g00534 332 SMART cyclin_7 87 168 IPR013763 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g00534 Cme-Chr8:3334267 Cme11g01601 Cme-Chr11:23800296 2.99E-07 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00534 K06634 - csv:101220754 637.876