Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00582 ATGTCTGATCACAAATCAGGCTCAATGGCCGATCAGCTCTCCAAGCAGACCTCTATTTTTGGTCTACGCTTGTGGGTTGTTCTTGGGGTTTGTGTTGGAGCAGCTTTTGTGCTCTTCCTCTTTCTAATTTCTCTTTGGATTGCTTCAAAACGCTCTCGCAAGAAGATTTCTAACAGACCCACCATTCCAATCGTCTCTAAAGAAATCCAAGAGATCAGAATCGATCATCCCCTCCCTCAAAACCAAGAACATAATAAGCCCAGTAGGTCCCATTTTCAGGTCGACCCACTTCCGGAGCCGGAACCAATTCCGGGAATTGAGCGTCAAGCGTTGCTTTCGTTGCCTCAGGAGGAGGAGCGAGTGAATAGGATTCATATTGAGATCGGGAAGGATCATAGGATTTCGTTTCCTGAGCGCCTTGGTCGGTCTTCTTCCTCGCAGGGTAGTGGAGAGGGGCGATGTGGTGGTGATCAGTTGCCTATGGTGGTGCCTGAAGTTTCGCATTTGGGTTGGGGGCATTGGTACACTCTCAGAGAGCTCGAAGCCTCGACTAATGGGTTCTCCCCAGATAATGTAATTGGTGAGGGTGGGTATGGAATTGTTTACCATGGCATATTGGAGGATGGAACTCAGGTTGCTGTGAAGAATTTGCTAAATAATAGGGGACAAGCCGAGAAGGAGTTCAAAGTTGAAGTTGAAGCAATTGGACGAGTCAGACACAAGAGCTTAGTTAGATTGCTTGGATACTGTGCTGAAGGTGCTCATAGGATGCTTGTATATGAGTATATAAATAATGGAAACTTGGAACAATGGCTTCATGGGGATGTTGGATCTTTCAGCCCTCTTACCTGGGAGATTAGAATGAATATCATTCTTGGAACGGCTAAAGGGCTAGCTTACCTCCACGAGGGATTAGAACCAAAAGTTGTTCACCGGGATATCAAATCAAGCAATATCCTACTCGATAAGCAATGGAATTCCAAGGTTTCAGATTTTGGCCTTGCAAAGCTACTGTGCTCTGACAATAGTTATATTACAACCCGAGTTATGGGAACATTTGGTTATGTTGCACCAGAATATGCGAGTACAGGAATGCTGAATGAAAGAAGTGATGTGTATAGTTTTGGAATACTTGTTATGGAAATAATATCAGGACGGAACCCTGTCGATTATAGTCGTCCTCCAGATGAGGTGAACTTGATCGATTGGCTTAAGAGAATGGTTAGTAACCGTAATCCAGAGGGCGTATTGGATCCAAAGCTTGCTGAAAAGCCTACTACAAGAGCATTAAAGCGGGCTCTTCTTGTTGCATTACGCTGTGTGGACCCAAATGCTCAGAAACGGCCAAAAATGGGACATATTATTCATATGCTAGAAGCTGAAGATGCTAACTTTAAAGGGGATCGTAAAGGTGGAAAAGACCCAGAGAATTCACATTCAAACAATGTCAATAATGGTTTAAACGAAAGGCAGGCGACAGAATTAGGTGGCAAAAATGTGGACGAACTCACTACTCGACAACGAGATATGTGA 1533 44.29 MSDHKSGSMADQLSKQTSIFGLRLWVVLGVCVGAAFVLFLFLISLWIASKRSRKKISNRPTIPIVSKEIQEIRIDHPLPQNQEHNKPSRSHFQVDPLPEPEPIPGIERQALLSLPQEEERVNRIHIEIGKDHRISFPERLGRSSSSQGSGEGRCGGDQLPMVVPEVSHLGWGHWYTLRELEASTNGFSPDNVIGEGGYGIVYHGILEDGTQVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKSLVRLLGYCAEGAHRMLVYEYINNGNLEQWLHGDVGSFSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKQWNSKVSDFGLAKLLCSDNSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILVMEIISGRNPVDYSRPPDEVNLIDWLKRMVSNRNPEGVLDPKLAEKPTTRALKRALLVALRCVDPNAQKRPKMGHIIHMLEAEDANFKGDRKGGKDPENSHSNNVNNGLNERQATELGGKNVDELTTRQRDM 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3680046 3683494 - MELO3C007569.2.1 Cme08g00582 334845

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00582 510 Pfam Protein kinase domain 190 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme08g00582 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Cme08g00582 510 ProSitePatterns Protein kinases ATP-binding region signature. 193 215 IPR017441 GO:0005524
Cme08g00582 510 SUPERFAMILY Protein kinase-like (PK-like) 168 459 IPR011009 -
Cme08g00582 510 CDD STKc_IRAK 193 459 - -
Cme08g00582 510 MobiDBLite consensus disorder prediction 77 99 - -
Cme08g00582 510 Gene3D Transferase(Phosphotransferase) domain 1 263 471 - -
Cme08g00582 510 ProSiteProfiles Protein kinase domain profile. 187 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme08g00582 510 MobiDBLite consensus disorder prediction 465 510 - -
Cme08g00582 510 PANTHER RECEPTOR-LIKE KINASE PLANT 1 500 - -
Cme08g00582 510 PANTHER OS01G0323000 PROTEIN 1 500 - -
Cme08g00582 510 SMART serkin_6 187 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme08g00582 510 MobiDBLite consensus disorder prediction 477 492 - -
Cme08g00582 510 Gene3D Phosphorylase Kinase; domain 1 168 262 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00582 - - - csv:101214966 979.933
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01426 Cme-Chr1:18142257 Cme08g00582 Cme-Chr8:3680046 1.30E-169 dispersed
Cme06g00160 Cme-Chr6:982691 Cme08g00582 Cme-Chr8:3680046 2.16E-154 dispersed
Cme08g00582 Cme-Chr8:3680046 Cme11g01574 Cme-Chr11:23333440 8.64E-177 dispersed
Cme03g02062 Cme-Chr3:28105142 Cme08g00582 Cme-Chr8:3680046 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi7g1058 . . . . Bpe06g00195 . . . . Cmo07g00711 . . . . . Cpe19g00628 . Bhi03g00934 . . . . . . Cla01g01655 . . . . . . . . . . . Csa06g02950 . Cme08g00582 . . . . . . . . . . . Cma03g00971 Cma07g00696 Car03g00876 . Cpe10g00441 . . . . . . . . . . . . . . . . . Chy02g00904 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cme05g01968 CCT 65 423 Trihelix Transcription Factor Family AT1G12040 65.1 7.8e-43 172.6
Cme02g01330 CCT 45 219 Trihelix Transcription Factor Family AT1G12040 64.0 1.7e-37 154.8
Cme05g01968 CCT 47 423 Trihelix Transcription Factor Family AT4G18670 81.5 4.5e-66 250.0
Cme02g01330 CCT 25 392 Trihelix Transcription Factor Family AT4G18670 82.4 2.2e-65 247.7
Cme11g02177 . 31 224 Trihelix Transcription Factor Family AT4G18670 60.0 4.2e-40 163.7
Cme11g02179 . 17 210 Trihelix Transcription Factor Family AT4G18670 60.0 4.2e-40 163.7
Cme06g00581 . 30 366 Trihelix Transcription Factor Family AT4G18670 72.4 5.5e-40 163.3
Cme11g02180 . 7 221 Trihelix Transcription Factor Family AT4G18670 55.4 7.2e-40 162.9
Cme11g02178 . 39 224 Trihelix Transcription Factor Family AT4G18670 59.4 2.3e-38 157.9
Cme11g02178 . 36 419 Trihelix Transcription Factor Family AT3G19020 67.4 1.6e-56 218.4
Cme11g02180 . 10 395 Trihelix Transcription Factor Family AT3G19020 66.2 8.6e-55 212.6
Cme11g02177 . 13 419 Trihelix Transcription Factor Family AT3G19020 62.1 2.5e-54 211.1
Cme11g02179 . 16 405 Trihelix Transcription Factor Family AT3G19020 63.8 1.6e-53 208.4
Cme02g01330 CCT 2 390 Trihelix Transcription Factor Family AT3G19020 70.9 4.4e-43 173.7
Cme05g01968 CCT 42 239 Trihelix Transcription Factor Family AT3G19020 66.0 1.2e-40 165.6
Cme11g02178 . 67 400 Trihelix Transcription Factor Family AT1G49490 67.9 1.5e-45 181.8
Cme11g02180 . 57 397 Trihelix Transcription Factor Family AT1G49490 66.5 9.6e-45 179.1
Cme11g02177 . 12 400 Trihelix Transcription Factor Family AT1G49490 60.2 2.8e-44 177.6
Cme11g02179 . 46 386 Trihelix Transcription Factor Family AT1G49490 65.6 3.6e-44 177.2
Cme02g01330 CCT 56 393 Trihelix Transcription Factor Family AT1G49490 74.0 9.9e-42 169.1
Cme05g01968 CCT 76 408 Trihelix Transcription Factor Family AT1G49490 74.2 8.4e-41 166.0
Cme11g02180 . 27 397 Trihelix Transcription Factor Family AT2G15880 66.8 9.6e-62 235.3
Cme11g02177 . 30 416 Trihelix Transcription Factor Family AT2G15880 63.3 2.1e-61 234.2
Cme11g02179 . 16 402 Trihelix Transcription Factor Family AT2G15880 63.3 2.1e-61 234.2
Cme11g02178 . 37 416 Trihelix Transcription Factor Family AT2G15880 64.4 1.2e-59 228.4
Cme02g01330 CCT 26 397 Trihelix Transcription Factor Family AT2G15880 67.3 5.9e-43 172.9
Cme05g01968 CCT 47 423 Trihelix Transcription Factor Family AT2G15880 65.0 3.6e-40 163.7
Cme11g02180 . 10 403 Trihelix Transcription Factor Family AT4G33970 63.7 9.0e-57 218.8
Cme11g02177 . 3 411 Trihelix Transcription Factor Family AT4G33970 60.7 1.7e-55 214.5
Cme11g02179 . 6 397 Trihelix Transcription Factor Family AT4G33970 63.6 2.4e-54 210.7
Cme11g02178 . 36 411 Trihelix Transcription Factor Family AT4G33970 65.7 3.2e-54 210.3
Cme02g01330 CCT 27 393 Trihelix Transcription Factor Family AT4G33970 67.1 1.3e-36 151.8
Cme03g02188 . 1 202 Trihelix Transcription Factor Family AT1G13450 62.5 5.4e-67 251.1
Cme04g02727 CCT 54 302 Trihelix Transcription Factor Family AT5G01380 57.6 4.3e-54 208.8
Cme05g01968 CCT 47 423 Trihelix Transcription Factor Family AT4G18670 81.5 4.5e-66 250.0
Cme02g01330 CCT 25 392 Trihelix Transcription Factor Family AT4G18670 82.4 2.2e-65 247.7
Cme11g02177 . 31 224 Trihelix Transcription Factor Family AT4G18670 60.0 4.2e-40 163.7
Cme11g02179 . 17 210 Trihelix Transcription Factor Family AT4G18670 60.0 4.2e-40 163.7
Cme06g00581 . 30 366 Trihelix Transcription Factor Family AT4G18670 72.4 5.5e-40 163.3
Cme11g02180 . 7 221 Trihelix Transcription Factor Family AT4G18670 55.4 7.2e-40 162.9
Cme11g02178 . 39 224 Trihelix Transcription Factor Family AT4G18670 59.4 2.3e-38 157.9
Cme11g02180 . 10 403 Trihelix Transcription Factor Family AT4G33970 63.7 9.0e-57 218.8
Cme11g02177 . 3 411 Trihelix Transcription Factor Family AT4G33970 60.7 1.7e-55 214.5
Cme11g02179 . 6 397 Trihelix Transcription Factor Family AT4G33970 63.6 2.4e-54 210.7
Cme11g02178 . 36 411 Trihelix Transcription Factor Family AT4G33970 65.7 3.2e-54 210.3
Cme02g01330 CCT 27 393 Trihelix Transcription Factor Family AT4G33970 67.1 1.3e-36 151.8
Cme03g00609 . 111 610 Trihelix Transcription Factor Family AT1G76880 53.8 2.5e-103 373.2
Cme03g00621 . 51 489 Trihelix Transcription Factor Family AT1G76880 55.6 1.7e-96 350.5
Cme04g02428 . 95 361 Trihelix Transcription Factor Family AT3G10000 53.4 1.9e-63 240.4
Cme11g02178 . 36 419 Trihelix Transcription Factor Family AT3G19020 67.4 1.6e-56 218.4
Cme11g02180 . 10 395 Trihelix Transcription Factor Family AT3G19020 66.2 8.6e-55 212.6
Cme11g02177 . 13 419 Trihelix Transcription Factor Family AT3G19020 62.1 2.5e-54 211.1
Cme11g02179 . 16 405 Trihelix Transcription Factor Family AT3G19020 63.8 1.6e-53 208.4
Cme02g01330 CCT 2 390 Trihelix Transcription Factor Family AT3G19020 70.9 4.4e-43 173.7
Cme05g01968 CCT 42 239 Trihelix Transcription Factor Family AT3G19020 66.0 1.2e-40 165.6
Cme11g02178 . 67 400 Trihelix Transcription Factor Family AT1G49490 67.9 1.5e-45 181.8
Cme11g02180 . 57 397 Trihelix Transcription Factor Family AT1G49490 66.5 9.6e-45 179.1
Cme11g02177 . 12 400 Trihelix Transcription Factor Family AT1G49490 60.2 2.8e-44 177.6
Cme11g02179 . 46 386 Trihelix Transcription Factor Family AT1G49490 65.6 3.6e-44 177.2
Cme02g01330 CCT 56 393 Trihelix Transcription Factor Family AT1G49490 74.0 9.9e-42 169.1
Cme05g01968 CCT 76 408 Trihelix Transcription Factor Family AT1G49490 74.2 8.4e-41 166.0
Cme09g00179 . 355 743 Trihelix Transcription Factor Family AT1G68690 64.4 6.1e-140 495.0
Cme10g00313 . 288 704 Trihelix Transcription Factor Family AT1G68690 58.4 8.3e-129 458.0
Cme10g00523 . 278 671 Trihelix Transcription Factor Family AT1G68690 58.9 5.6e-125 445.3
Cme02g01367 CCT 246 534 Trihelix Transcription Factor Family AT1G68690 65.7 3.7e-113 406.0
Cme05g01976 CCT 283 578 Trihelix Transcription Factor Family AT1G68690 63.2 3.9e-110 396.0
Cme11g00187 . 119 406 Trihelix Transcription Factor Family AT1G68690 63.0 2.6e-106 383.3
Cme07g01715 . 270 557 Trihelix Transcription Factor Family AT1G68690 61.6 1.1e-104 377.9
Cme04g01192 . 393 671 Trihelix Transcription Factor Family AT1G68690 55.1 4.3e-85 312.8
Cme04g00927 . 359 639 Trihelix Transcription Factor Family AT1G68690 56.7 2.1e-84 310.5
Cme07g02090 . 347 635 Trihelix Transcription Factor Family AT1G68690 55.5 2.1e-84 310.5
Cme02g00246 . 621 902 Trihelix Transcription Factor Family AT1G68690 55.4 1.0e-81 301.6
Cme01g02844 . 493 792 Trihelix Transcription Factor Family AT1G68690 51.8 3.9e-78 289.7
Cme04g02570 . 73 386 Trihelix Transcription Factor Family AT1G68690 50.6 1.1e-77 288.1
Cme11g02350 . 71 355 Trihelix Transcription Factor Family AT1G68690 50.7 1.5e-77 287.7
Cme06g00702 . 75 359 Trihelix Transcription Factor Family AT1G68690 51.4 3.3e-77 286.6
Cme07g00052 CCT,ECH 55 336 Trihelix Transcription Factor Family AT1G68690 50.2 4.8e-76 282.7
Cme10g00828 . 66 350 Trihelix Transcription Factor Family AT1G68690 50.7 1.8e-75 280.8
Cme09g00179 . 356 689 Trihelix Transcription Factor Family AT1G26150 65.5 1.1e-117 421.0
Cme10g00313 . 287 607 Trihelix Transcription Factor Family AT1G26150 67.5 3.0e-115 412.9
Cme10g00523 . 241 617 Trihelix Transcription Factor Family AT1G26150 55.1 1.4e-101 367.5
Cme02g01367 CCT 241 480 Trihelix Transcription Factor Family AT1G26150 68.2 2.8e-97 353.2
Cme05g01976 CCT 283 524 Trihelix Transcription Factor Family AT1G26150 66.5 2.2e-94 343.6
Cme07g01715 . 270 503 Trihelix Transcription Factor Family AT1G26150 66.0 8.5e-94 341.7
Cme11g00187 . 120 351 Trihelix Transcription Factor Family AT1G26150 67.8 4.2e-93 339.3
Cme02g00246 . 614 851 Trihelix Transcription Factor Family AT1G26150 58.8 1.2e-76 284.6
Cme04g01192 . 386 621 Trihelix Transcription Factor Family AT1G26150 55.5 1.2e-74 278.1
Cme07g02090 . 348 584 Trihelix Transcription Factor Family AT1G26150 60.1 1.5e-74 277.7
Cme04g02570 . 79 326 Trihelix Transcription Factor Family AT1G26150 56.0 1.3e-73 274.6
Cme01g01426 . 86 330 Trihelix Transcription Factor Family AT1G26150 53.2 1.4e-72 271.2
Cme03g02062 . 169 398 Trihelix Transcription Factor Family AT1G26150 53.5 7.7e-71 265.4
Cme10g01369 . 719 948 Trihelix Transcription Factor Family AT1G26150 54.8 2.3e-70 263.8
Cme03g01340 CCT,ECH 47 288 Trihelix Transcription Factor Family AT1G26150 54.7 2.9e-70 263.5
Cme01g02844 . 467 741 Trihelix Transcription Factor Family AT1G26150 50.2 5.0e-70 262.7
Cme11g01574 . 174 403 Trihelix Transcription Factor Family AT1G26150 55.6 8.6e-70 261.9
Cme11g02350 . 67 302 Trihelix Transcription Factor Family AT1G26150 54.2 2.5e-69 260.4
Cme05g01512 . 166 395 Trihelix Transcription Factor Family AT1G26150 53.9 7.2e-69 258.8
Cme06g00702 . 73 306 Trihelix Transcription Factor Family AT1G26150 55.6 7.2e-69 258.8
Cme10g00828 . 66 297 Trihelix Transcription Factor Family AT1G26150 56.0 7.2e-69 258.8
Cme01g01543 . 182 411 Trihelix Transcription Factor Family AT1G26150 54.7 2.1e-68 257.3
Cme08g00582 . 175 404 Trihelix Transcription Factor Family AT1G26150 51.3 2.1e-68 257.3
Cme12g00287 . 78 321 Trihelix Transcription Factor Family AT1G26150 53.3 4.7e-68 256.1
Cme12g00367 . 74 309 Trihelix Transcription Factor Family AT1G26150 52.1 8.0e-68 255.4
Cme07g02042 . 13 257 Trihelix Transcription Factor Family AT1G26150 50.6 1.4e-67 254.6
Cme07g00052 CCT,ECH 55 284 Trihelix Transcription Factor Family AT1G26150 53.9 2.3e-67 253.8
Cme11g02117 . 162 390 Trihelix Transcription Factor Family AT1G26150 54.3 2.3e-67 253.8
Cme01g01744 . 152 386 Trihelix Transcription Factor Family AT1G26150 52.3 6.8e-67 252.3
Cme02g00113 . 126 358 Trihelix Transcription Factor Family AT1G26150 50.2 8.3e-65 245.4
Cme08g02317 . 30 267 Trihelix Transcription Factor Family AT1G26150 50.4 8.3e-65 245.4
Cme09g00162 . 265 504 Trihelix Transcription Factor Family AT1G26150 50.2 9.2e-64 241.9
Cme03g02234 . 286 517 Trihelix Transcription Factor Family AT1G26150 50.4 1.6e-63 241.1
Cme07g01776 . 266 499 Trihelix Transcription Factor Family AT1G26150 50.4 4.5e-63 239.6
Cme06g00980 . 1014 1243 Trihelix Transcription Factor Family AT1G26150 50.9 7.8e-63 238.8
Cme03g00892 . 132 364 Trihelix Transcription Factor Family AT1G26150 50.6 1.7e-62 237.7
Cme10g00523 . 289 567 Trihelix Transcription Factor Family AT1G23540 64.8 7.3e-99 358.2
Cme07g01715 . 267 454 Trihelix Transcription Factor Family AT1G23540 72.3 1.7e-76 283.9
Cme02g01367 CCT 221 430 Trihelix Transcription Factor Family AT1G23540 66.7 3.9e-76 282.7
Cme09g00179 . 462 639 Trihelix Transcription Factor Family AT1G23540 73.0 5.6e-75 278.9
Cme05g01976 CCT 283 467 Trihelix Transcription Factor Family AT1G23540 69.2 1.8e-73 273.9
Cme11g00187 . 116 303 Trihelix Transcription Factor Family AT1G23540 67.6 7.6e-72 268.5
Cme10g00313 . 370 556 Trihelix Transcription Factor Family AT1G23540 67.9 4.9e-71 265.8
Cme01g01543 . 169 361 Trihelix Transcription Factor Family AT1G23540 52.6 6.0e-53 205.7
Cme04g01793 . 534 716 Trihelix Transcription Factor Family AT1G23540 54.1 6.0e-53 205.7
Cme01g01426 . 102 281 Trihelix Transcription Factor Family AT1G23540 54.4 1.0e-52 204.9
Cme11g01574 . 146 353 Trihelix Transcription Factor Family AT1G23540 50.7 1.3e-52 204.5
Cme03g02062 . 158 348 Trihelix Transcription Factor Family AT1G23540 51.0 1.9e-51 200.7
Cme05g01512 . 152 345 Trihelix Transcription Factor Family AT1G23540 51.3 1.9e-51 200.7
Cme08g00582 . 164 354 Trihelix Transcription Factor Family AT1G23540 51.0 7.4e-51 198.7
Cme09g00162 . 277 453 Trihelix Transcription Factor Family AT1G23540 57.5 7.4e-51 198.7
Cme04g02800 . 614 796 Trihelix Transcription Factor Family AT1G23540 52.5 1.3e-50 198.0
Cme02g00246 . 608 801 Trihelix Transcription Factor Family AT1G23540 51.8 1.6e-50 197.6
Cme11g02117 . 149 340 Trihelix Transcription Factor Family AT1G23540 52.1 3.7e-50 196.4
Cme02g01026 . 281 458 Trihelix Transcription Factor Family AT1G23540 55.0 6.2e-50 195.7
Cme04g01192 . 385 571 Trihelix Transcription Factor Family AT1G23540 50.8 1.4e-49 194.5
Cme04g00927 . 359 538 Trihelix Transcription Factor Family AT1G23540 53.9 2.4e-49 193.7
Cme10g00319 . 300 476 Trihelix Transcription Factor Family AT1G23540 54.2 2.4e-49 193.7
Cme02g00224 . 376 561 Trihelix Transcription Factor Family AT1G23540 50.5 5.3e-49 192.6
Cme09g01202 . 273 449 Trihelix Transcription Factor Family AT1G23540 53.6 5.3e-49 192.6
Cme07g02042 . 28 207 Trihelix Transcription Factor Family AT1G23540 53.3 9.0e-49 191.8
Cme07g00052 CCT,ECH 55 235 Trihelix Transcription Factor Family AT1G23540 52.7 1.2e-48 191.4
Cme07g01430 . 34 213 Trihelix Transcription Factor Family AT1G23540 51.1 1.5e-48 191.0
Cme03g02234 . 286 466 Trihelix Transcription Factor Family AT1G23540 51.9 4.5e-48 189.5
Cme03g00892 . 132 312 Trihelix Transcription Factor Family AT1G23540 53.6 1.7e-47 187.6
Cme04g00634 . 399 583 Trihelix Transcription Factor Family AT1G23540 51.1 2.2e-47 187.2
Cme07g01380 . 35 214 Trihelix Transcription Factor Family AT1G23540 51.1 6.5e-47 185.7
Cme03g01340 CCT,ECH 59 239 Trihelix Transcription Factor Family AT1G23540 50.8 8.4e-47 185.3
Cme07g02090 . 347 534 Trihelix Transcription Factor Family AT1G23540 52.7 8.4e-47 185.3
Cme06g00980 . 1014 1189 Trihelix Transcription Factor Family AT1G23540 51.1 1.1e-46 184.9
Cme07g01180 . 278 458 Trihelix Transcription Factor Family AT1G23540 53.6 1.1e-46 184.9
Cme01g02528 . 802 977 Trihelix Transcription Factor Family AT1G23540 51.1 1.4e-46 184.5
Cme04g02455 . 334 511 Trihelix Transcription Factor Family AT1G23540 51.1 2.5e-46 183.7
Cme06g01191 . 774 949 Trihelix Transcription Factor Family AT1G23540 52.8 2.5e-46 183.7
Cme08g00469 . 881 1060 Trihelix Transcription Factor Family AT1G23540 52.2 3.2e-46 183.3
Cme11g00012 . 365 557 Trihelix Transcription Factor Family AT1G23540 50.8 4.2e-46 183.0
Cme03g02188 . 1 378 Trihelix Transcription Factor Family AT3G25990 66.7 1.2e-140 496.5
Cme05g01968 CCT 65 423 Trihelix Transcription Factor Family AT1G12040 65.1 7.8e-43 172.6
Cme02g01330 CCT 45 219 Trihelix Transcription Factor Family AT1G12040 64.0 1.7e-37 154.8
Cme04g02727 CCT 36 305 Trihelix Transcription Factor Family AT2G38250 58.0 4.0e-59 225.3
Cme09g00179 . 355 791 Trihelix Transcription Factor Family AT5G38560 70.8 4.3e-173 605.1
Cme10g00523 . 264 735 Trihelix Transcription Factor Family AT5G38560 55.8 4.4e-141 498.8
Cme10g00313 . 287 762 Trihelix Transcription Factor Family AT5G38560 55.5 1.3e-137 487.3
Cme02g01367 CCT 216 600 Trihelix Transcription Factor Family AT5G38560 57.6 6.3e-124 441.8
Cme05g01976 CCT 232 633 Trihelix Transcription Factor Family AT5G38560 55.5 1.2e-119 427.6
Cme07g01715 . 274 605 Trihelix Transcription Factor Family AT5G38560 62.7 2.9e-116 416.4
Cme11g00187 . 123 471 Trihelix Transcription Factor Family AT5G38560 60.5 1.8e-115 413.7
Cme07g02090 . 351 666 Trihelix Transcription Factor Family AT5G38560 51.9 7.6e-85 312.0
Cme04g01192 . 392 676 Trihelix Transcription Factor Family AT5G38560 53.3 2.9e-84 310.1
Cme02g00246 . 621 926 Trihelix Transcription Factor Family AT5G38560 51.8 3.9e-81 299.7
Cme01g01543 . 181 466 Trihelix Transcription Factor Family AT5G38560 50.2 2.1e-74 277.3
Cme03g01340 CCT,ECH 59 347 Trihelix Transcription Factor Family AT5G38560 50.2 6.7e-73 272.3
Cme02g01367 CCT 217 612 Trihelix Transcription Factor Family AT4G32710 59.6 6.4e-122 435.3
Cme05g01976 CCT 250 658 Trihelix Transcription Factor Family AT4G32710 58.0 1.4e-121 434.1
Cme11g00187 . 126 482 Trihelix Transcription Factor Family AT4G32710 60.4 5.8e-115 412.1
Cme07g01715 . 277 590 Trihelix Transcription Factor Family AT4G32710 63.8 1.0e-111 401.4
Cme10g00523 . 343 705 Trihelix Transcription Factor Family AT4G32710 56.8 1.3e-106 384.4
Cme09g00179 . 462 760 Trihelix Transcription Factor Family AT4G32710 62.6 1.2e-104 377.9
Cme10g00313 . 376 709 Trihelix Transcription Factor Family AT4G32710 53.7 3.6e-93 339.7
Cme07g00052 CCT,ECH 55 341 Trihelix Transcription Factor Family AT4G32710 50.3 6.0e-72 269.2
Cme10g00523 . 214 716 Trihelix Transcription Factor Family AT1G70460 64.0 9.7e-168 587.4
Cme09g00179 . 462 789 Trihelix Transcription Factor Family AT1G70460 71.6 5.8e-136 481.9
Cme02g01367 CCT 240 583 Trihelix Transcription Factor Family AT1G70460 65.4 6.4e-127 451.8
Cme05g01976 CCT 282 641 Trihelix Transcription Factor Family AT1G70460 63.3 1.9e-126 450.3
Cme07g01715 . 267 619 Trihelix Transcription Factor Family AT1G70460 63.9 1.5e-123 440.7
Cme10g00313 . 370 759 Trihelix Transcription Factor Family AT1G70460 57.2 6.4e-119 425.2
Cme11g00187 . 118 455 Trihelix Transcription Factor Family AT1G70460 63.1 3.2e-118 422.9
Cme04g01192 . 385 679 Trihelix Transcription Factor Family AT1G70460 51.5 1.1e-83 308.1
Cme02g00224 . 375 668 Trihelix Transcription Factor Family AT1G70460 50.3 5.7e-83 305.8
Cme07g02090 . 347 639 Trihelix Transcription Factor Family AT1G70460 53.0 6.5e-79 292.4
Cme02g00246 . 616 906 Trihelix Transcription Factor Family AT1G70460 51.2 3.2e-78 290.0
Cme11g01574 . 163 460 Trihelix Transcription Factor Family AT1G70460 50.2 5.5e-78 289.3
Cme04g00927 . 359 643 Trihelix Transcription Factor Family AT1G70460 52.1 1.0e-76 285.0
Cme11g02117 . 151 427 Trihelix Transcription Factor Family AT1G70460 50.9 1.5e-72 271.2
Cme11g02180 . 27 397 Trihelix Transcription Factor Family AT2G15880 66.8 9.6e-62 235.3
Cme11g02177 . 30 416 Trihelix Transcription Factor Family AT2G15880 63.3 2.1e-61 234.2
Cme11g02179 . 16 402 Trihelix Transcription Factor Family AT2G15880 63.3 2.1e-61 234.2
Cme11g02178 . 37 416 Trihelix Transcription Factor Family AT2G15880 64.4 1.2e-59 228.4
Cme02g01330 CCT 26 397 Trihelix Transcription Factor Family AT2G15880 67.3 5.9e-43 172.9
Cme05g01968 CCT 47 423 Trihelix Transcription Factor Family AT2G15880 65.0 3.6e-40 163.7
Cme04g02428 . 95 361 Trihelix Transcription Factor Family AT5G03680 59.5 1.0e-77 288.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000807 2 2 2 3 1 1 3 1 0 3 2 1 5 3 0 4 1 2 4 1 3 1 0 0 0 3 0 1 0 3 52
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65072 PF00069 Pkinase 5.50E-46 CL0016 Cme PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cme08g00582 Cme_Chr08 FPKM 6.283071 6.767956 0.0 0.0 11.246774 12.755474 10.992375 0.0 0.0 0.0