Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00605 ATGGAAATCTACTCTCTGCTTTACCTATTTCTCTCTCTTATCTCTCTCCTCTTCGCTTTCAACCTCCGCAGCAGCCGCAGAAACTTACCGCCCAGTCCCCCGTCTCTCCCCATCATCGGCCACCTCCATTACCTCAAAATCCCCCTCCATCGAACTTTACAGAAACTCTCTGCAAAATACGGACCAGTAATCTCTCTCTGGTTTGGATCTCGCCTCGTTGTGGTCGTCTCGTCGTTGCCGGCAGTGGAGGAGTGCTTCACTAAGAACGACATCGTTTTAGCCAATCGTCCTCGGTTGCTAGTCGGCAAACACGTCGGCTACAACCACACTACGATGGTAGCGTCACCTTACGGAGACCACTGGCGGAACCTCCGCCGAATCGGAGCTATCGAGATCTTTTCAGCGTCTCGCCTCAATAAATTTGCAGGAACCCGGAAGGATGAAGTGGAACGGTTACTGAAGAAGCTATCTAGGAATTCGATGAATGGATTCTCGAAAGTAGAGATGCAATCGGCGATTGCGGAACTGACGTTTAACATATCGATGAGAATGGCGGCCGGAAAGAGGTATTTCGGTGAGGAAGTGACGGATGTGGAGGAAGCAAGACAGTCGAGAGAGCTGATTAAACAGATCGTCTCGCTGGGAGGAGTATCGAATCCGGGAGATTTCATTCCGTTGATGAATTGGATCCCGAATGGATTTAGGAGGAAGGTTTCGAGACTTGCGAAGAGGATGGACGGGTTTTTGCAGGGATTGATTGATGAACATCGGAGCAATAAGTGTGAAGAAAGGAACACAATGATCGATCATTTGCTATCTCTGCAGGAATCGGAGCCTGAGTACTATGGAGATCAAATAATCAAAGGAATTATTCTGGTGTTGCTACTAGCAGGAACAGACACATCAGCTGTTACAATTGAATGGGCTTTAGCTCACTTGCTCAACAATCTAGAGGTACTAAAAAAAGCTAGAGAAGAGCTAGACACTCAGATCGGAGAAAAACGACTGGTGGAAGAATCAGACATTCTCAAGTTACCATATCTTCAAGGAATCATCTCCGAGACTCTTCGATTGAACCCAGCTGCTCCAATGCTAGTGCCACATCTAACCTCCAATGATTGTACAATCAGTGGGTATAAAATACCACGCGACACGATTGTATTGGTTAATGCATGGGCTATCCACAGAGAACCCAATCAATGGGAAGAGCCCACACTATTCAAACCAGAAAGACACCAAAAGTCAGAATCCAGTAGCCATCATCAGATCCCAAAGTTGATTCCATTTGGAATCGGACGACGAGCTTGCCCCGGCTCGGGCATGGCTCAACGAGTGGTGGGGTTGACTCTGGCGGCTTTGATTCAATGCTACGAGTGGGAGAGGATTGGCGAAGAGAAAGTGGACATGGCGGAAGGAAGAGGCGTCACTATGCCCAAGCTGCTGCCATTGGAAGCTATGTGCAAACCTCGCCCTATCATCCACCACATTTTTAACTGA 1497 47.96 MEIYSLLYLFLSLISLLFAFNLRSSRRNLPPSPPSLPIIGHLHYLKIPLHRTLQKLSAKYGPVISLWFGSRLVVVVSSLPAVEECFTKNDIVLANRPRLLVGKHVGYNHTTMVASPYGDHWRNLRRIGAIEIFSASRLNKFAGTRKDEVERLLKKLSRNSMNGFSKVEMQSAIAELTFNISMRMAAGKRYFGEEVTDVEEARQSRELIKQIVSLGGVSNPGDFIPLMNWIPNGFRRKVSRLAKRMDGFLQGLIDEHRSNKCEERNTMIDHLLSLQESEPEYYGDQIIKGIILVLLLAGTDTSAVTIEWALAHLLNNLEVLKKAREELDTQIGEKRLVEESDILKLPYLQGIISETLRLNPAAPMLVPHLTSNDCTISGYKIPRDTIVLVNAWAIHREPNQWEEPTLFKPERHQKSESSSHHQIPKLIPFGIGRRACPGSGMAQRVVGLTLAALIQCYEWERIGEEKVDMAEGRGVTMPKLLPLEAMCKPRPIIHHIFN 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3870530 3874384 - MELO3C007590.2.1 Cme08g00605 334868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00605 498 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 495 - -
Cme08g00605 498 SUPERFAMILY Cytochrome P450 30 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00605 498 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00605 498 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00605 498 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00605 498 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00605 498 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00605 498 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00605 498 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00605 498 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00605 498 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00605 498 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00605 498 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00605 498 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00605 498 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00605 498 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 4 495 - -
Cme08g00605 498 Coils Coil 310 340 - -
Cme08g00605 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Cme08g00605 498 Pfam Cytochrome P450 30 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00605 498 Gene3D Cytochrome P450 19 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00312 Cme-Chr7:1992845 Cme08g00605 Cme-Chr8:3870530 6.96E-166 dispersed
Cme07g00886 Cme-Chr7:8967186 Cme08g00605 Cme-Chr8:3870530 2.68E-165 dispersed
Cme08g00605 Cme-Chr8:3870530 Cme11g00747 Cme-Chr11:9237535 0 dispersed
Cme08g00605 Cme-Chr8:3870530 Cme08g00607 Cme-Chr8:3882367 0 proximal
Cme03g02084 Cme-Chr3:28227383 Cme08g00605 Cme-Chr8:3870530 3.40E-158 wgd
Cme07g00305 Cme-Chr7:1969355 Cme08g00605 Cme-Chr8:3870530 4.24E-156 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00605 K13260 - csv:101211829 904.82