Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00624 ATGGCCAACCCCGTCTGGACTTTTTTACTTCTCTGTCTCTTCTCTGTGCCGTCCATGGCTGTCGGAGACAAGAAGAAGACTTACATTGTGCATATGGCAAAGTACCAAATGCCTGAGAGTTTTGAGCACCATTTGCACTGGTATGACTCCTCACTCAGATCGGTGTCCGATTCCGCTGAGATGATCTATGCGTACAACAACGTGGTTCATGGGTTTTCAACCAGATTGACGACGGAGGAAGCTCAGCGGCTGGAAGCCCAACCTGGGATTCTGGCTGTGGTGCCTGAGATGAGATATGAACTTCATACCACTCGTTCTCCGCAGTTTCTTGGCCTTGACAAGAATGCGAATCTTTACCCTGAATCCAACTCCGTGTCGGAGGTTATCATTGGAGTTTTGGATACTGGGGTTTGGCCGGAGAGTAAGAGCTTTGATGATACAGGGCTTGGACCAGTTCCGAGTAGCTGGAAAGGTGAGTGTGAATCGGGTACTAACTTTAGTGCATCGAACTGTAACAGGAAGCTGATTGGAGCTAGATTTTTCTCCAAAGGCTATGAGGCAACTCTGGGTCCGATCGATGAATCTAAAGAATCTAGATCTCCGAGAGATGACGATGGCCATGGAACCCACACCGCTAGCACTGCGGCCGGTTCTGTAGTTGAAAACGCGAGTCTATTTGGGTATGCCTCGGGCACCGCCCGTGGAATGGCCGCGCGTGCGAGAGTCGCCGCCTACAAGGTTTGCTGGGCTGGCGGATGTTTCAGCTCCGATATCGTAGCCGCCATGGACAAGGCTGTGGAAGACAATGTTAATGTGATGTCCATGTCGCTTGGGGGTGGAGTATCCGATTATTACAAAGATAGTGTGGCCACCGGAGCCTTTGCCGCCATGGAGAAAGGCATCCTCGTTTCTTGCTCTGCAGGAAATGCCGGCCCCAGTCCTTTCAGTTTGTCAAATACGTCTCCATGGATTACAACCGTCGGCGCTGGAACATTAGATCGTGATTTTCCGGCGTATGTTAGTCTTGGAGACGCCAAGAACTTCTCCGGCGTTTCACTTTATCGAGGCAAGTCGTTGCCAGGAACATTGTTGCCTTTTATTTACGCAGCTAATGCGAGTAACTCGGGTAATGGCAATTTGTGTATGACTGGTACTTTGATCCCTGAAAAGGTCGCCGGAAAGGTCGTGTTCTGTGACCGAGGTGTAAACCCTAGGGTTCAGAAAGGTGCAGTCGTCAAAGCCGCTGGTGGAATCGGAATGGTGCTGGCGAATACCGCCGCAAATGGAGAAGAGTTGGTGGCCGACTCTCATCTTCTCCCGGCCACGGCGGTGGGTCAGAAATCTGGCGACATTATACGAAAGTATCTCGTTTCGGACCCAAAACCGACGGTGACGATCTTATTCGAAGGGACTAAATTAGGGATCGAACCATCGCCGGTGGTGGCGGCGTTTAGTTCCCGTGGACCAAATTCGATCACCCCTCAGTTGCTGAAGCCCGACATAATAGCCCCTGGCGTCAACATCTTAGCTGGATGGTCAAAATCCGTGGGACCAAGTGGTTTAGCCATTGATGACAGACGAGTGGATTTCAACATTATCTCTGGAACCTCCATGTCCTGCCCCCATGTGAGCGGTCTCGCTGCTCTGATCAAGGGTGCTCATCCCGATTGGAGTCCGGCTGCGATTCGATCGGCGTTGATGACAACAGCCTACACAGCCTACAAAAATGGCCAAAAGATCCAAGATATCGCCACCGGAAAACCATCCACCCCATTCGATCACGGAGCCGGACACGTGGATCCCGTATCAGCTCTCAATCCAGGTCTTGTTTACGATCTAACGGTGGACGATTACCTGAACTTCCTCTGCGCACTCAACTACACTCCGTCGCAGATCAACTCACTGGCAAGGAAAGATTTCACTTGCGACTCCAAGAAGAAGTACAGTGTCAACGATCTCAACTACCCTTCTTTCGCCGTCGTTTTCGATGGTGTATTAGGCGGCGGAGGCAGTGGTTCCAGTGTAGTCAAGCACACCAGAACACTTACAAACGTTGGCTCCCCAGGAACCTACAAAGTCTCAATCTCGTCGGAGACCAAATCAGTGAAAATCTCCGTCGAGCCGGAATCATTGAGCTTCACCGGAGCCAATGAGAAGAAGTCTTACACAGTCACATTCACCTCCAACGGTTCGGCGGCGCCATCGAGTGCAGAAGGGTTTGGTCGAATTGAGTGGTCGGACGGGAAACACGTGGTGGGAAGTCCGATTGCGTTTAGCTGGACGTAG 2286 51.4 MANPVWTFLLLCLFSVPSMAVGDKKKTYIVHMAKYQMPESFEHHLHWYDSSLRSVSDSAEMIYAYNNVVHGFSTRLTTEEAQRLEAQPGILAVVPEMRYELHTTRSPQFLGLDKNANLYPESNSVSEVIIGVLDTGVWPESKSFDDTGLGPVPSSWKGECESGTNFSASNCNRKLIGARFFSKGYEATLGPIDESKESRSPRDDDGHGTHTASTAAGSVVENASLFGYASGTARGMAARARVAAYKVCWAGGCFSSDIVAAMDKAVEDNVNVMSMSLGGGVSDYYKDSVATGAFAAMEKGILVSCSAGNAGPSPFSLSNTSPWITTVGAGTLDRDFPAYVSLGDAKNFSGVSLYRGKSLPGTLLPFIYAANASNSGNGNLCMTGTLIPEKVAGKVVFCDRGVNPRVQKGAVVKAAGGIGMVLANTAANGEELVADSHLLPATAVGQKSGDIIRKYLVSDPKPTVTILFEGTKLGIEPSPVVAAFSSRGPNSITPQLLKPDIIAPGVNILAGWSKSVGPSGLAIDDRRVDFNIISGTSMSCPHVSGLAALIKGAHPDWSPAAIRSALMTTAYTAYKNGQKIQDIATGKPSTPFDHGAGHVDPVSALNPGLVYDLTVDDYLNFLCALNYTPSQINSLARKDFTCDSKKKYSVNDLNYPSFAVVFDGVLGGGGSGSSVVKHTRTLTNVGSPGTYKVSISSETKSVKISVEPESLSFTGANEKKSYTVTFTSNGSAAPSSAEGFGRIEWSDGKHVVGSPIAFSWT 761
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4015273 4018197 - MELO3C007609.2.1 Cme08g00624 334887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00624 761 Gene3D - 333 474 - -
Cme08g00624 761 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 759 IPR045051 -
Cme08g00624 761 CDD PA_subtilisin_like 339 466 - -
Cme08g00624 761 Gene3D Peptidase S8/S53 domain 128 618 IPR036852 GO:0004252|GO:0006508
Cme08g00624 761 ProSiteProfiles Serine proteases, subtilase domain profile. 98 605 - -
Cme08g00624 761 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 17 759 - -
Cme08g00624 761 SUPERFAMILY Subtilisin-like 101 609 IPR036852 GO:0004252|GO:0006508
Cme08g00624 761 Gene3D - 622 760 - -
Cme08g00624 761 Pfam Peptidase inhibitor I9 27 102 IPR010259 -
Cme08g00624 761 Pfam Subtilase family 126 575 IPR000209 GO:0006508|GO:0008236
Cme08g00624 761 PRINTS Subtilisin serine protease family (S8) signature 125 144 IPR015500 -
Cme08g00624 761 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Cme08g00624 761 PRINTS Subtilisin serine protease family (S8) signature 534 550 IPR015500 -
Cme08g00624 761 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 102 IPR037045 -
Cme08g00624 761 Pfam PA domain 381 451 IPR003137 -
Cme08g00624 761 CDD Peptidases_S8_3 99 571 IPR034197 -
Cme08g00624 761 ProSitePatterns Serine proteases, subtilase family, serine active site. 535 545 IPR023828 -
Cme08g00624 761 MobiDBLite consensus disorder prediction 191 214 - -
Cme08g00624 761 MobiDBLite consensus disorder prediction 191 209 - -
Cme08g00624 761 Pfam Fibronectin type-III domain 652 757 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02803 Cme-Chr1:35044878 Cme08g00624 Cme-Chr8:4015273 0 dispersed
Cme02g00307 Cme-Chr2:2555800 Cme08g00624 Cme-Chr8:4015273 0 dispersed
Cme08g00624 Cme-Chr8:4015273 Cme10g01524 Cme-Chr10:19274980 0 dispersed
Cme12g00798 Cme-Chr12:14476674 Cme08g00624 Cme-Chr8:4015273 0 dispersed
Cme01g02767 Cme-Chr1:34768660 Cme08g00624 Cme-Chr8:4015273 0 transposed
Cme06g00938 Cme-Chr6:6569971 Cme08g00624 Cme-Chr8:4015273 0 transposed
Cme11g00387 Cme-Chr11:3917870 Cme08g00624 Cme-Chr8:4015273 0 transposed
Cme03g02092 Cme-Chr3:28252992 Cme08g00624 Cme-Chr8:4015273 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00624 - - csv:101209691 1426.77