Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00634 ATGGGTCGCTTCAATCTCATTCTCACACTCTCTCTTCTTTCTCTCTTTCTCTTCTTCCCTTCCCCAACACTCGCCCAACTCCGACAAAATTTCTACGCCAACATTTGTCCCAATGTCGAAAACATTGTCCGCTCCGAAGTTACCAAAAAATTTCAACAAACTTTCGTCACTGTTCCCGCCACTCTTCGCCTCTTCTTCCATGATTGCTTTGTTCAGGGATGTGATGCCTCTGTAATTATTGCTTCCACCGCATCCAACAAGGCCGAGAAAGACCATCCCGATAACCTCTCCCTTGCTGGAGATGGATTCGACACCGTCATTAAAGCTAAAGCTGCCCTCGACGCCATTCCTCAATGCCGAAACAGAGTCTCCTGTGCCGATATTCTCGCTTTAGCCACCCGTGATGTCATCGCATTGTCCGGCGGACCGTCGTACGCGGTGGAGCTAGGAAGATTAGACGGTCTGGTTTCTAGAGCCTCGGACGTGAACGGTAGACTCCCAGCACCAACCTTCAATCTCAATCAGCTCAATTCTCTATTTGCTGCGAATGGCCTCACGCAACAAGACATGATCGCTCTCTCAGCGGCTCACACCGTCGGATTCTCACACTGTGAGAAATTCTCGAACCGAATTTACAACTTTGCCCCTGGGAGACCAGTGGACCCTACACTAAACCGAACCTATGCAACCCAGCTACAAGCGATGTGCCCCAAGAACGTGGACCCGAGGGTGGCGATTAACATGGACCCAATCACCCCCAGAGCGTTTGACAACGTTTACTTTAGAAATTTACAGCAAGGGATGGGTCTGTTCACGTCAGACCAGGTTCTGTTCAGCGACGGGCGGTCCAGGCCCACGGTGAACACGTGGGCTAGAGACTCACAAGCTTTCAATAAAGCTTTTATTCAAGCTATGACTAAGTTGGGGCGGGTCGGGGTGAAGACCGGTAGGAATGGCAATATTCGGCGCGATTGTGGAGCGTTTAATTGA 990 50.51 MGRFNLILTLSLLSLFLFFPSPTLAQLRQNFYANICPNVENIVRSEVTKKFQQTFVTVPATLRLFFHDCFVQGCDASVIIASTASNKAEKDHPDNLSLAGDGFDTVIKAKAALDAIPQCRNRVSCADILALATRDVIALSGGPSYAVELGRLDGLVSRASDVNGRLPAPTFNLNQLNSLFAANGLTQQDMIALSAAHTVGFSHCEKFSNRIYNFAPGRPVDPTLNRTYATQLQAMCPKNVDPRVAINMDPITPRAFDNVYFRNLQQGMGLFTSDQVLFSDGRSRPTVNTWARDSQAFNKAFIQAMTKLGRVGVKTGRNGNIRRDCGAFN 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4094550 4096120 + MELO3C007618.2.1 Cme08g00634 334897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00634 329 PANTHER PEROXIDASE 1 329 - -
Cme08g00634 329 PANTHER - 1 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00634 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Cme08g00634 329 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g00634 329 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g00634 329 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g00634 329 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g00634 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g00634 329 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Cme08g00634 329 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00634 329 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00634 329 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00634 329 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00634 329 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00634 329 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00634 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00634 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00634 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00634 329 Gene3D - 30 329 - -
Cme08g00634 329 ProSiteProfiles Plant heme peroxidase family profile. 26 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g00634 329 Gene3D Peroxidase, domain 2 167 308 - -
Cme08g00634 329 CDD secretory_peroxidase 26 328 IPR033905 GO:0004601|GO:0042744
Cme08g00634 329 Pfam Peroxidase 43 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g00634 329 SUPERFAMILY Heme-dependent peroxidases 26 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01925 Cme-Chr4:26977901 Cme08g00634 Cme-Chr8:4094550 1.80E-90 dispersed
Cme08g00634 Cme-Chr8:4094550 Cme11g00354 Cme-Chr11:3632127 0 dispersed
Cme08g00634 Cme-Chr8:4094550 Cme12g01717 Cme-Chr12:23962345 4.28E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00634 K00430 - csv:101206860 627.091