Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00635 ATGATGCAATTCAGCCATACACCCCAACGTTTCCACCAAACCACCACCACTATTCCTTCTTCCTTTTCGGATATCTCAATGAGTAATAAAAACCAAATCACTCCCACGACCGGGCCGTTTCGAAATAGGCGGCCATGGCCTGGATTATTCCCTTGTTCCTCCAAAGCTTTGGGAACTTGCTTGGGTGATGCTAATTGTATGGAACAGTTACTAGTCCATTGTGCCAATGCTATTGAATCCAACGACGCTACTCTGGCTCAACAAATCCTTTGGGTCCTTAACAACATTGCCCCTCCTGATGGCGATTCCAACCAACGCTTAACTTCCGCTTTCTTACGCGCTCTCGTCACACGCGCCACCAACACTGGCAACTGTAAGATTCTTGCTGCAATTACCACCGCATTCTCTTCTTCCATCACTACTCACACCTTCTCTCTTATGGACCTTGCCACCTTCGTGGACTTAACCCCTTGGCATCGCTTCGGCTTCACCGCTGCCAATGTTGCGATTCTGGACGCCATCGAGGGTTACTCTTCCGTACACGTTGTTGATTTGAGCTTGATGCATTGCATGCAAATCCCAACATTAATCGACGCCATTGCTACACGGTTCGAGGTCCCTCCATTACTGAAACTGACGACTGTAGCTGTTGTTGCCGTTAAAGAGGCGTCACCAATGCTGGAGCTTTCGTACGACGAATTAGGTGCGAAATTAGTGAACTTCGCGAGGTCTAAAAACGTGACCATGGAATTTAGAGTGGTCCCGTCTTGTCATACAGACGGTTTCGCCCGTTTAATCGAACAAATCCGAGTACAACATTTAATTTACGGACCTGAAAGTAATGAAGCACTCGTTTTTAATTGTCATATGATGCTTCATTACATTCCTGAAGAAACATTAAACCCAAGCCCATCTCCTAATTTCGACATGTCGTCTTCCACCTCTTCAATTCGTTCCATGTTTCTCAAAGCAATCCGTAGCTTAGATCCAACGATTGTGGTTTTAGTTGACGAAGATGCGGATTTCACCTCAAGCAAGTTGGTTACACGATTGAGATCGGCGTTTAATTATCTCTGGATTCCTTACGACTCCATGGATTCGTTTCTTCCTCGAAGCAGCAAACAGAGAGAATGGTACGAAGCGGATATTTGTTGGAAGATTGAGAATGTAATTGCTCATGAAGGGGTTCAGCGAGTTCAGAGATTGGAGCCGAAGGGGCGGTGGGTTCAACGGATGATGAACGCCAAATTCCGAGGGGTTCCGTTTGTGGAGGACGCGGTTTCAGAGGTGAAGACGATGCTTGATGAGCATGCAGCGGGATGGGGATTGAAGAAGGAAGAGGACCACTTGCTGCTGACGTGGAAAGGCCACGACGTCGTTTTCGCCACTGCTTGGGTACCTTGCTAA 1407 47.19 MMQFSHTPQRFHQTTTTIPSSFSDISMSNKNQITPTTGPFRNRRPWPGLFPCSSKALGTCLGDANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTSAFLRALVTRATNTGNCKILAAITTAFSSSITTHTFSLMDLATFVDLTPWHRFGFTAANVAILDAIEGYSSVHVVDLSLMHCMQIPTLIDAIATRFEVPPLLKLTTVAVVAVKEASPMLELSYDELGAKLVNFARSKNVTMEFRVVPSCHTDGFARLIEQIRVQHLIYGPESNEALVFNCHMMLHYIPEETLNPSPSPNFDMSSSTSSIRSMFLKAIRSLDPTIVVLVDEDADFTSSKLVTRLRSAFNYLWIPYDSMDSFLPRSSKQREWYEADICWKIENVIAHEGVQRVQRLEPKGRWVQRMMNAKFRGVPFVEDAVSEVKTMLDEHAAGWGLKKEEDHLLLTWKGHDVVFATAWVPC 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4101851 4103372 - MELO3C007619.2.1 Cme08g00635 334898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00635 468 MobiDBLite consensus disorder prediction 1 41 - -
Cme08g00635 468 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 32 466 IPR005202 -
Cme08g00635 468 ProSiteProfiles GRAS family profile. 58 466 IPR005202 -
Cme08g00635 468 MobiDBLite consensus disorder prediction 1 39 - -
Cme08g00635 468 Pfam GRAS domain family 67 465 IPR005202 -
Cme08g00635 468 PANTHER SCARECROW-LIKE PROTEIN 32 32 466 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00394 Cme-Chr1:2816624 Cme08g00635 Cme-Chr8:4101851 1.61E-120 dispersed
Cme08g00635 Cme-Chr8:4101851 Cme08g00647 Cme-Chr8:4237066 7.44E-52 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41787 PF03514 GRAS 6.30E-92 CL0063 Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00635 - - csv:101213756 882.478