Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00717 ATGCGTTATTTAAGGAAGTTGACGTTCCTCTGTAATGGTTTTTTTACTATCTGTAAAATGGGAACTCAAGGTCAAACAGGATTAGTAGCACAAAAGAAAATGCACCCTCCTCAGCCCGGAAGATTTGAAGATCGTGAAGATCTTATTAAATATGTTCGTGATTTTGGTGCTGATCAGGGATATGTTGTAACGATTAAGAAGTCTAGGAAAGATAGAAGGGTCATCCTTGGTTGTGATAGAGGAGGTGTGTACCGCAACAGGCGTAAGATTGATCAGAGTCCACGCAAAAGGAAAGCTAGCTCACGCCTGATAAATTGCCCATTTGAAGCAATTGGCAAGAAGGAAGATGATGCCTGGATGCTTACCATTAAAAATGGGAACCATAACCATGAGCCCTTAAAAGATAGGTCAGAGCATCCTTACAGTCGCCGTTTTACAGAGGATGAAGTAAAGCAAATAAAACTAATGACTGAAGCTGGTATAAAACCACGTCAAGTGCTTAAAGCTCTCAAACAACACAATCCAGATCTGCAGTCAACACCAAGGCATTTGTATAACCTCAAAGCCAAAATTCGCCAAGGAAATCTATCAGAAAAGAATTTCAAGTCTTGGAGGCCTAATATTTCCGTTCCTGCAAATAGTAGTCATACTGTCGCTGGGGATTCAATCAAGCAAAATCATCAGCTGAAGGTTCCTAATTTAATTGGAGGGGAACTTTTGGATTCGCACAACTGTCAAGTGGTTGATGTTATTAACCCAGCAACACAAGAAGTTGTTTCTCATGTCCCTTTAACAACCTACGAAGAGTTTAAGGCTGCTGTCAATGCAGCCAAACAAGCTTTTCCCTCATGGAGAAACACACCGATCTATACTCGTCAGTGTGTTATGTTCAAGTTCCAGGAGCTCATCCTCAGGGACATGGATAAGCTTGTAATGAATATTGTTGCAGAACAGGGAAAAACATTAAAGGATGCTCAAGATGATATTATCTGTGGTTTAGAGGTGGTTAAACATGCTTGTGGATTGGCCACTATGCAAATGGGGGAGTTCATCCCTAGTGCATCTGATGGAATTGATTCGTACTGCATCAGAGAACCAATGGGTGTGTGTGCTGGCATATGCTCTTTAAACCATCCAGCAACAGTTTCCTTATGGATGTTTCCAATTGCAGTTACATGTGGCAATACATTTGTTCTTAAACCATGTGAAACGCACCCCGGGGCTTCAATGTTGCTAGCTGCATTAGCGATGGAGTCTGGCTTGCCTGATGGTGTTTTGAATATTGTTCATGGATCCCATGATATCATCAACTATATATGTGACGACGAGGACATAAAAGCTGTATCCTTTTCCAGTTCAAGTTCAGTTGGAAAACACATATATGCTAGGGCTGCTGCTACAGCAAAGAAAGTTCAGGTTTATCCTTCCCACTTTGGAGGCAAGAGTCATGCAATTATTATGCCTGATGCTAACATGGAGGCTACTTTAAGTGCTCTGGTTGATGCTGGGTTGGGTATTGTTGGACGGACATGTATGGCTATTGACATCATTGTCTCCGTTGGGAGTTCAACTCTGTGGGAAGAAAAACTTGTGGAATGTGCCAAAGCACTTAAAGTGAATGTGGGAACAGATCCCAATGCTGACCTTGGTCCTGTAACTACCAAAGAGGTCTCAGGATATGAAAATGGAAATTTTATCGGCCCAACCATTTTATCGGGTGTAACAACTGACATGGAGTGCTACAAGGAAGAATTTTTTGGACCAGTTCTCCTTTTTATGCAGGCGGACAACCTAGAGGAGGCTATATCCATTGTAAACCGAAACAAAAACCGAAATGAAGCTTCCATATTCACAACTTCTGGCATTTATGCGAGGAAGTTTCAGAGTGAAGTGGAAGTGGGAATGGTTGGTATCAATGTTCCTGTTACAGTTCCGTTGCCATCTTCCTTTAATGACAAGGTAGGGCTGGAGTTTTACACCCAATTGAAGAGAGTGGCTCAACAATGGAAGAACTCACCAAGTATTGGAGTCTCAATGGCGGTGCCTTCACCATCTGAGAGACGTTTGAGATCCCGGGATGCACCTTCCATGTTGGTTTCAACATCTGAGAAAGATTCACCTGGTATGAAGCACAGGAGTTTACCCCCGTTGCCTTCCACATCTGAAAGGGATTCACCCAGCGTCGCTGTACTGCTGCCGAACCCTCTAATAACTCCGACAGGCTTAACTAATGAAAGATCCACCTCCTCTCCGCCGACTCCTGATAGGAATTTGCACGGTCAGGGACTCTCCCTGATTTCTACTTTATCATCGGAGGGGGATGTATCCAACCAAGATTTGTCTCCTGCAATGCTTTCAGCGCGTGATAGAGATTTAGCTGGTCAAGCTATGTCAATGGCAACATCCAGATCATCTGATAGACTGTACATACCTCATAAATCTCATTGGGATGAAACCCCGAGGGCTGATTCAATTCCATCCAGTTCTGACAGGATCCATGCGCCCTTATCACAGACAAGCAGCATCAAAGGACAGGCATGTCGAACAACTCATCCTGCTTTGGTCATAGCTGCAGAGGGGGGGCTATACGTGCCAACATCTCATGACACTATTTGTCTAATTAACCATGGACATGATAGTACCGGTCCGTCTCGAAGAATCAACAGCATGTGTCAATCATCAGAACGGGTATACATGCTAGCAACTTCCCATCTGAACGACACTATAGGTCAAACATTGCAGAGATCTGATACCTCCTTGTTTCCTTCTTCAGAGAGGCATTATGCGCCTCCCTCTTCTGATGGAAATGACCATATCAGCTTAGCCTCTCATACCGATGTCACTTTGCAATCAACCTCAGACAGAATGTTCTTGTCTAGTTTGTCTGAAAGGGATGATAATATGGCTTCCACTGCTTCCCAACAAGGTGAATCTTTAGCATCCACTTCAGAGAGAATGTATAGACCTCCATTAGTTCATAGAAATGCAGGTATGGCACCGAAATCGGAATGGTTATGCATTCCCACGCCTGCTGGAACTCAGAGAATGTACACACAAGGTCCAATGGTTTCAGCAGATGAATTTCAAAGCCAAGGAGCATCATTGACATTGCCTGCATCGCAAAGAATGTAA 3132 43.49 MRYLRKLTFLCNGFFTICKMGTQGQTGLVAQKKMHPPQPGRFEDREDLIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDQSPRKRKASSRLINCPFEAIGKKEDDAWMLTIKNGNHNHEPLKDRSEHPYSRRFTEDEVKQIKLMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLSEKNFKSWRPNISVPANSSHTVAGDSIKQNHQLKVPNLIGGELLDSHNCQVVDVINPATQEVVSHVPLTTYEEFKAAVNAAKQAFPSWRNTPIYTRQCVMFKFQELILRDMDKLVMNIVAEQGKTLKDAQDDIICGLEVVKHACGLATMQMGEFIPSASDGIDSYCIREPMGVCAGICSLNHPATVSLWMFPIAVTCGNTFVLKPCETHPGASMLLAALAMESGLPDGVLNIVHGSHDIINYICDDEDIKAVSFSSSSSVGKHIYARAAATAKKVQVYPSHFGGKSHAIIMPDANMEATLSALVDAGLGIVGRTCMAIDIIVSVGSSTLWEEKLVECAKALKVNVGTDPNADLGPVTTKEVSGYENGNFIGPTILSGVTTDMECYKEEFFGPVLLFMQADNLEEAISIVNRNKNRNEASIFTTSGIYARKFQSEVEVGMVGINVPVTVPLPSSFNDKVGLEFYTQLKRVAQQWKNSPSIGVSMAVPSPSERRLRSRDAPSMLVSTSEKDSPGMKHRSLPPLPSTSERDSPSVAVLLPNPLITPTGLTNERSTSSPPTPDRNLHGQGLSLISTLSSEGDVSNQDLSPAMLSARDRDLAGQAMSMATSRSSDRLYIPHKSHWDETPRADSIPSSSDRIHAPLSQTSSIKGQACRTTHPALVIAAEGGLYVPTSHDTICLINHGHDSTGPSRRINSMCQSSERVYMLATSHLNDTIGQTLQRSDTSLFPSSERHYAPPSSDGNDHISLASHTDVTLQSTSDRMFLSSLSERDDNMASTASQQGESLASTSERMYRPPLVHRNAGMAPKSEWLCIPTPAGTQRMYTQGPMVSADEFQSQGASLTLPASQRM 1043
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4771511 4783734 + MELO3C007705.2.1 Cme08g00717 334980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00717 1043 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 557 1042 - -
Cme08g00717 1043 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 20 557 - -
Cme08g00717 1043 MobiDBLite consensus disorder prediction 964 982 - -
Cme08g00717 1043 MobiDBLite consensus disorder prediction 737 761 - -
Cme08g00717 1043 Pfam Aldehyde dehydrogenase family 558 646 IPR015590 GO:0016491
Cme08g00717 1043 Pfam Aldehyde dehydrogenase family 244 556 IPR015590 GO:0016491
Cme08g00717 1043 MobiDBLite consensus disorder prediction 917 940 - -
Cme08g00717 1043 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 479 556 IPR016163 GO:0016620
Cme08g00717 1043 MobiDBLite consensus disorder prediction 964 986 - -
Cme08g00717 1043 MobiDBLite consensus disorder prediction 675 761 - -
Cme08g00717 1043 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 557 646 IPR016163 GO:0016620
Cme08g00717 1043 SUPERFAMILY ALDH-like 225 671 IPR016161 GO:0016491
Cme08g00717 1043 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 557 1042 IPR010061 GO:0004491
Cme08g00717 1043 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 20 557 IPR010061 GO:0004491
Cme08g00717 1043 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 235 478 IPR016162 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00184 Cme-Chr1:1275062 Cme08g00717 Cme-Chr8:4771511 0 dispersed
Cme08g00717 Cme-Chr8:4771511 Cme11g01643 Cme-Chr11:24293435 2.19E-45 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00717 K00140 - csv:101207178 1931.76