Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00737 ATGGCGGATAGTTTTTACTGTACAGAGAATGCCAATATTTGTTTTGATGAAAATAATGAATTTGATGAACGATGCTCAATTTCTCTGCCCCATCGAAGAACCCGTGAACCGAATGTTGAATTTTTCGGATCCGAAAATTTTCTGGGCTCTTCTGTACTAGAGAGTGAAGAGAGAGTTAAAAGAATGGTTGAGAAAGAGATTGAGCATTTACCAACTCATGATTATCTTAAGAGAATGCTCTCTGGGGATTTGGATTTGAAGTTTAGAAGAGAGGCTGTTGATTGGATTTGGAAGGCTCATGCCCATTACAGCTTTGGTCCTCTGAGTCTTTGTTTATCTATGAACTACTTGGACCGTTTCCTCTCAGTGTATCATTTGCCTATGGATAAAAGCTGGACTGTACAGCTGCTGTCAGTAGCTTGTATGTCTTTAGCAGCAAAAATGGAGGAGACAGAAGTTCCTCTTCCTATAGATTTACAGGTTGAGGAACCAAAGTTTGTGTTTGAAGCAAAAACCATACAAAGAATGGAACTTCTTGTTCTAAGTAGGTTGAAATGGAAGATGCAAGCCATAACTCCATTTTCTTTCATTGATTATTTCCTCAGTAAGATCAGTGTTGAGCAGCAGAACATACCAAGCTTTTACTTCTCAAAATCATCACAACTCATTCTGAGCACAATTAAAGGCATTGACTTCTTGGAATTCAAGCCTTCTGAAATTGCTTTGGCTGTGGCAATTTCCATTTCAAGAGAATTTCAAACACCAGATATGAATAAAGCAATCCTTTCTTTTCCATATATGGAGAAAGAAAGAGTGATGAAGTGCATTGAACTGATTAGAGATTTTTCATTGATTAGTAATGTATATGGAAATACATTGGGTGGTGGTAATGTTGGTTCAGTTCCTCAAAGCCCTGTTGGGGTTTTGGATGCAGCTTGTTTGAGTTACAAAACAGAGGAATTATTAACCGCAGGTTCATATGGTAATGGTAATTCTTCTTCTTCTTCTTCTTCTTCTTCTCATGACAGTCAAGACAGCAAGAGGAGGAGACAAGATAGACCATCATCAAATGATGATGATACAAGTCCATCCAGTCCTGTCAAATGA 1107 38.03 MADSFYCTENANICFDENNEFDERCSISLPHRRTREPNVEFFGSENFLGSSVLESEERVKRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKAHAHYSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACMSLAAKMEETEVPLPIDLQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKISVEQQNIPSFYFSKSSQLILSTIKGIDFLEFKPSEIALAVAISISREFQTPDMNKAILSFPYMEKERVMKCIELIRDFSLISNVYGNTLGGGNVGSVPQSPVGVLDAACLSYKTEELLTAGSYGNGNSSSSSSSSSHDSQDSKRRRQDRPSSNDDDTSPSSPVK 368
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 4915013 4917254 + MELO3C007725.2.1 Cme08g00737 335000
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00737 368 ProSitePatterns Cyclins signature. 89 120 IPR006671 -
Cme08g00737 368 MobiDBLite consensus disorder prediction 325 368 - -
Cme08g00737 368 SUPERFAMILY Cyclin-like 54 188 IPR036915 -
Cme08g00737 368 MobiDBLite consensus disorder prediction 325 341 - -
Cme08g00737 368 Gene3D - 60 278 - -
Cme08g00737 368 SUPERFAMILY Cyclin-like 173 290 IPR036915 -
Cme08g00737 368 CDD CYCLIN 89 181 IPR013763 -
Cme08g00737 368 PANTHER CYCLINS 46 339 IPR039361 -
Cme08g00737 368 Pfam Cyclin, N-terminal domain 60 188 IPR006671 -
Cme08g00737 368 Gene3D - 72 189 - -
Cme08g00737 368 PANTHER CYCLIN-D4-1-LIKE 46 339 - -
Cme08g00737 368 SMART cyclin_7 94 182 IPR013763 -
Cme08g00737 368 Pfam Cyclin, C-terminal domain 191 283 IPR004367 -
Cme08g00737 368 SMART Cyclin_C_2 191 304 IPR004367 -
Cme08g00737 368 MobiDBLite consensus disorder prediction 342 357 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00076 Cme-Chr1:541452 Cme08g00737 Cme-Chr8:4915013 8.55E-47 dispersed
Cme07g00288 Cme-Chr7:1864543 Cme08g00737 Cme-Chr8:4915013 8.42E-34 dispersed
Cme07g00321 Cme-Chr7:2043673 Cme08g00737 Cme-Chr8:4915013 3.23E-44 dispersed
Cme08g00596 Cme-Chr8:3802829 Cme08g00737 Cme-Chr8:4915013 5.33E-44 dispersed
Cme08g00737 Cme-Chr8:4915013 Cme10g00495 Cme-Chr10:3184437 1.59E-40 dispersed
Cme07g02202 Cme-Chr7:26268922 Cme08g00737 Cme-Chr8:4915013 6.94E-66 transposed
Cme09g00668 Cme-Chr9:7328331 Cme08g00737 Cme-Chr8:4915013 1.20E-54 transposed
Cme11g01106 Cme-Chr11:16360182 Cme08g00737 Cme-Chr8:4915013 1.49E-39 transposed
Cme03g01823 Cme-Chr3:26613276 Cme08g00737 Cme-Chr8:4915013 3.01E-99 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00737 K18810 - csv:101209378 688.337