Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme08g00821 | ATGACGGGCCGAGGATCATCGGGAAGGACGCCGACATGGAAAGAAAGGGAGAACAATAAGAGGAGAGAGAGGCGACGGAGGGCCATTGCTGCTAAGATCTACACTGGCCTTAGAGCTCAAGGGAACTATAAGCTTCCTAAGCACTGTGACAACAACGAAGTCTTAAAGGCACTCTGTAATGAAGCTGGTTGGGTGGTTGAGGAAGATGGCACAACCTATCGCAAGGGATGCAAGCCACCTCCGATTGATATTGGCACTTCTGCTAATATGAGCGCCTGTTCTTCGCTTCAACCGAGCCCGCAGTCTTCATGCTTCCCAAGTCCTGTACCATCGTACCACGCCAGTCCTTCTTCATCCTCTTTTCCAAGCCCGACTCGATTTGATGGGAATCCATCTTCTTATCTTCTGCCATTTCTTCAAAATATATCCTCTATTCCTGCTAATCTACCTCCTCTTAGGATATCCAACAGTGCACCTGTCACGCCACCTCTTTCTTCCCCAACTTCAAGGGGTTCGAAGCGAAAGCCAGATTGGGAGTCCATTCCAAATAGCTATGTGACCTCTTTCCGTCATCCACTTTTTGCTGTCTCTGCTCCTTCAAGTCCTACAAGATGCCACCATCTTACACCGGCAACAATTCCAGAATGTGATGAATCTGATGCTTCAACTGTAGATTCTGGCCGCTGGGTCAGTTTCCAGACTGTGGCACCTTCTGTGGCTCCTCCTTCGCCTACATTTAATCTGATGAAACCGGTTAGCCAGCAAAACTCTCTCCAAGATGCAGTTGACAGACATGGAACGATGGGCTGGGGTGCTACATCTGATAGGACACGTGGCTCTGAGTTTGAATTTGAGAAATTTGAGAGTGGCACAGTGAAGCCATGGGAGGGTGAGAGAATTCATGAAGTTGGGGTTGATGATCTTGAGCTTACTCTTGGAGGTGGGAAGGCCCGTGGTTAA | 960 | 48.85 | MTGRGSSGRTPTWKERENNKRRERRRRAIAAKIYTGLRAQGNYKLPKHCDNNEVLKALCNEAGWVVEEDGTTYRKGCKPPPIDIGTSANMSACSSLQPSPQSSCFPSPVPSYHASPSSSSFPSPTRFDGNPSSYLLPFLQNISSIPANLPPLRISNSAPVTPPLSSPTSRGSKRKPDWESIPNSYVTSFRHPLFAVSAPSSPTRCHHLTPATIPECDESDASTVDSGRWVSFQTVAPSVAPPSPTFNLMKPVSQQNSLQDAVDRHGTMGWGATSDRTRGSEFEFEKFESGTVKPWEGERIHEVGVDDLELTLGGGKARG | 319 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 5434941 | 5437903 | + | MELO3C007804.2.1 | Cme08g00821 | 335084 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme08g00821 | 319 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 6 | 129 | IPR008540 | - | |
Cme08g00821 | 319 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Cme08g00821 | 319 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 1 | 1 | 318 | - | - | |
Cme08g00821 | 319 | MobiDBLite | consensus disorder prediction | 155 | 179 | - | - | |
Cme08g00821 | 319 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 1 | 318 | IPR033264 | GO:0003700|GO:0006351|GO:0009742 | |
Cme08g00821 | 319 | MobiDBLite | consensus disorder prediction | 155 | 171 | - | - | |
Cme08g00821 | 319 | MobiDBLite | consensus disorder prediction | 10 | 24 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme08g00821 | Cme-Chr8:5434941 | Cme11g02155 | Cme-Chr11:28978200 | 2.36E-16 | dispersed | |
Cme12g01261 | Cme-Chr12:20706393 | Cme08g00821 | Cme-Chr8:5434941 | 5.65E-48 | transposed | |
Cme03g01975 | Cme-Chr3:27612904 | Cme08g00821 | Cme-Chr8:5434941 | 3.93E-95 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
41815 | PF05687 | BES1_N | 1.70E-64 | No_clan | Cme | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme08g00821 | K14503 | - | csv:101216171 | 578.17 |