Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme08g00892 | ATGGGATTTTGGGTATGGTTTGTGTGTGTTATTTTAGGTTGGTTTTTGTTCAAGAAGAAGAAGAAGATTATTGAGAACAAAGATGGAATTCCTAAAGGGAATTTGGGTTGGCCTTTCTTTGGTGAAACTCTTCAATTCATTTCTTCTGGCTATTCTTCTCGTCCTGTCACCTTCATGGACAAACGCAAATCTCTGTATGGGAATGTGTTTAAAACCAACATTTTGGGGACACCCATAATAGTATCAACTGATTCAGAGGTGAACAAGGTTATTTTACAAAACCATGGGAATATATTTACCCCAGCTTACCCAAAATCAATAACAGAATTACTTGGTACATATTCAATTCTAAGAATGAAAGGGAACGTTCAAAGAAGACTTCATACAATCATTGGAGCCTTCCTTAGGTCTCCTCAACTCAAAGCCCAAATCACTAAAGATATTCAAAATACTGTTCAACTTAGGCTTGCTAATTGGAACAATAACTCTCCATTGCATTTTCAAACTGAAGCCAAACAGATCACATTTGAAGTATTGGTGAAGGTGTTGATGAGTGTGGGACCTGGTAAAGAATTGGAGACTTTAAAAAGGGAATTTGAAGAGTTTATTAAAGCTTTGATTTGTATACCTATTAAATTACCTGGAACTAGGCTATATAAATCTTTGAAGGCCAGAGAGAAGTTATTGAAAATTGTGGGGAAGATTGTGGAAGAAAGGAAATCGAGGGTGGGGGAGAAGGGTGCACCGAGGGATGCGGTGGACGTGCTCTTACAGGATCACAGTGAGAACCAAGGGCTACCCCTCGATTTCATCAGCAGTCACATCATAGAGCTGATGATTCCCGGGGAGGAGACGGTACCGACGGCCATGACTCTCGCCGTTAAATTTCTCGGTGATTGTCCCCGCGCTCTTGCCCAATTAATGGAAGAGAATATGAAACTGAAGAAGGAGAAGGATGGATCTGGGGAGGAGTATACGTGGACAGATTACATGTCTTTGCAATTTACTCAAAATGTGATTAGTGAAACATTAAGAATGGCTAATATCGTCAATGGGGTTTGGAGAAAAGCTCAAAAAGATGTGAAAATCAAAGACTATTTAATACCGCAAGGATGGTGCGTCCTGGCTTCCTTTATTTCAGTTCATATGGATGAAAAGAACTATGCAAACCCACATGAGTTTGATCCATGGAGATGGGAGTATGGCTGCAATTGTAAAAAATATAAACAGGAAAATTTGTCTGCTACAAACAACCATAACTTTACACCTTTTGGAGGGGGACAGAGGCTATGTCCTGGAGTCGAACTCACCAGGCTCGAAATCTCAATTTTCCTTCATCATCTTGTCACGACCTACAGTCAAGATGAGAAGGAAGCTGCCAATCACAGTCACAACCTTAAGTTCTTGACTGGATTCAATCATCTCAACAACTTTGATACCAAGCTGTCGAGGAAATAA | 1458 | 40.12 | MGFWVWFVCVILGWFLFKKKKKIIENKDGIPKGNLGWPFFGETLQFISSGYSSRPVTFMDKRKSLYGNVFKTNILGTPIIVSTDSEVNKVILQNHGNIFTPAYPKSITELLGTYSILRMKGNVQRRLHTIIGAFLRSPQLKAQITKDIQNTVQLRLANWNNNSPLHFQTEAKQITFEVLVKVLMSVGPGKELETLKREFEEFIKALICIPIKLPGTRLYKSLKAREKLLKIVGKIVEERKSRVGEKGAPRDAVDVLLQDHSENQGLPLDFISSHIIELMIPGEETVPTAMTLAVKFLGDCPRALAQLMEENMKLKKEKDGSGEEYTWTDYMSLQFTQNVISETLRMANIVNGVWRKAQKDVKIKDYLIPQGWCVLASFISVHMDEKNYANPHEFDPWRWEYGCNCKKYKQENLSATNNHNFTPFGGGQRLCPGVELTRLEISIFLHHLVTTYSQDEKEAANHSHNLKFLTGFNHLNNFDTKLSRK | 485 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 5856568 | 5861464 | + | MELO3C007870.2.1 | Cme08g00892 | 335155 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme08g00892 | 485 | PANTHER | 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90C1 | 8 | 453 | - | - | |
Cme08g00892 | 485 | Pfam | Cytochrome P450 | 31 | 455 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme08g00892 | 485 | PRINTS | E-class P450 group IV signature | 333 | 349 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme08g00892 | 485 | PRINTS | E-class P450 group IV signature | 382 | 400 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme08g00892 | 485 | PRINTS | E-class P450 group IV signature | 415 | 431 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme08g00892 | 485 | PRINTS | E-class P450 group IV signature | 431 | 449 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme08g00892 | 485 | PRINTS | E-class P450 group IV signature | 57 | 80 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme08g00892 | 485 | Gene3D | Cytochrome P450 | 20 | 471 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme08g00892 | 485 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 424 | 433 | IPR017972 | GO:0005506|GO:0016705 | |
Cme08g00892 | 485 | PRINTS | P450 superfamily signature | 431 | 442 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme08g00892 | 485 | PRINTS | P450 superfamily signature | 422 | 431 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme08g00892 | 485 | PRINTS | P450 superfamily signature | 136 | 149 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme08g00892 | 485 | PRINTS | P450 superfamily signature | 338 | 349 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme08g00892 | 485 | PANTHER | CYTOCHROME P450 26 | 8 | 453 | - | - | |
Cme08g00892 | 485 | Coils | Coil | 304 | 324 | - | - | |
Cme08g00892 | 485 | SUPERFAMILY | Cytochrome P450 | 30 | 455 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme04g01196 | Cme-Chr4:16338502 | Cme08g00892 | Cme-Chr8:5856568 | 1.59E-162 | dispersed | |
Cme08g00892 | Cme-Chr8:5856568 | Cme10g01069 | Cme-Chr10:9321685 | 3.07E-112 | dispersed | |
Cme08g00892 | Cme-Chr8:5856568 | Cme01g02852 | Cme-Chr1:35383310 | 5.02E-174 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme08g00892 | K12637 | - | csv:101203911 | 830.476 |