Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00892 ATGGGATTTTGGGTATGGTTTGTGTGTGTTATTTTAGGTTGGTTTTTGTTCAAGAAGAAGAAGAAGATTATTGAGAACAAAGATGGAATTCCTAAAGGGAATTTGGGTTGGCCTTTCTTTGGTGAAACTCTTCAATTCATTTCTTCTGGCTATTCTTCTCGTCCTGTCACCTTCATGGACAAACGCAAATCTCTGTATGGGAATGTGTTTAAAACCAACATTTTGGGGACACCCATAATAGTATCAACTGATTCAGAGGTGAACAAGGTTATTTTACAAAACCATGGGAATATATTTACCCCAGCTTACCCAAAATCAATAACAGAATTACTTGGTACATATTCAATTCTAAGAATGAAAGGGAACGTTCAAAGAAGACTTCATACAATCATTGGAGCCTTCCTTAGGTCTCCTCAACTCAAAGCCCAAATCACTAAAGATATTCAAAATACTGTTCAACTTAGGCTTGCTAATTGGAACAATAACTCTCCATTGCATTTTCAAACTGAAGCCAAACAGATCACATTTGAAGTATTGGTGAAGGTGTTGATGAGTGTGGGACCTGGTAAAGAATTGGAGACTTTAAAAAGGGAATTTGAAGAGTTTATTAAAGCTTTGATTTGTATACCTATTAAATTACCTGGAACTAGGCTATATAAATCTTTGAAGGCCAGAGAGAAGTTATTGAAAATTGTGGGGAAGATTGTGGAAGAAAGGAAATCGAGGGTGGGGGAGAAGGGTGCACCGAGGGATGCGGTGGACGTGCTCTTACAGGATCACAGTGAGAACCAAGGGCTACCCCTCGATTTCATCAGCAGTCACATCATAGAGCTGATGATTCCCGGGGAGGAGACGGTACCGACGGCCATGACTCTCGCCGTTAAATTTCTCGGTGATTGTCCCCGCGCTCTTGCCCAATTAATGGAAGAGAATATGAAACTGAAGAAGGAGAAGGATGGATCTGGGGAGGAGTATACGTGGACAGATTACATGTCTTTGCAATTTACTCAAAATGTGATTAGTGAAACATTAAGAATGGCTAATATCGTCAATGGGGTTTGGAGAAAAGCTCAAAAAGATGTGAAAATCAAAGACTATTTAATACCGCAAGGATGGTGCGTCCTGGCTTCCTTTATTTCAGTTCATATGGATGAAAAGAACTATGCAAACCCACATGAGTTTGATCCATGGAGATGGGAGTATGGCTGCAATTGTAAAAAATATAAACAGGAAAATTTGTCTGCTACAAACAACCATAACTTTACACCTTTTGGAGGGGGACAGAGGCTATGTCCTGGAGTCGAACTCACCAGGCTCGAAATCTCAATTTTCCTTCATCATCTTGTCACGACCTACAGTCAAGATGAGAAGGAAGCTGCCAATCACAGTCACAACCTTAAGTTCTTGACTGGATTCAATCATCTCAACAACTTTGATACCAAGCTGTCGAGGAAATAA 1458 40.12 MGFWVWFVCVILGWFLFKKKKKIIENKDGIPKGNLGWPFFGETLQFISSGYSSRPVTFMDKRKSLYGNVFKTNILGTPIIVSTDSEVNKVILQNHGNIFTPAYPKSITELLGTYSILRMKGNVQRRLHTIIGAFLRSPQLKAQITKDIQNTVQLRLANWNNNSPLHFQTEAKQITFEVLVKVLMSVGPGKELETLKREFEEFIKALICIPIKLPGTRLYKSLKAREKLLKIVGKIVEERKSRVGEKGAPRDAVDVLLQDHSENQGLPLDFISSHIIELMIPGEETVPTAMTLAVKFLGDCPRALAQLMEENMKLKKEKDGSGEEYTWTDYMSLQFTQNVISETLRMANIVNGVWRKAQKDVKIKDYLIPQGWCVLASFISVHMDEKNYANPHEFDPWRWEYGCNCKKYKQENLSATNNHNFTPFGGGQRLCPGVELTRLEISIFLHHLVTTYSQDEKEAANHSHNLKFLTGFNHLNNFDTKLSRK 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5856568 5861464 + MELO3C007870.2.1 Cme08g00892 335155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00892 485 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90C1 8 453 - -
Cme08g00892 485 Pfam Cytochrome P450 31 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00892 485 PRINTS E-class P450 group IV signature 333 349 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00892 485 PRINTS E-class P450 group IV signature 382 400 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00892 485 PRINTS E-class P450 group IV signature 415 431 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00892 485 PRINTS E-class P450 group IV signature 431 449 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00892 485 PRINTS E-class P450 group IV signature 57 80 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00892 485 Gene3D Cytochrome P450 20 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00892 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Cme08g00892 485 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00892 485 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00892 485 PRINTS P450 superfamily signature 136 149 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00892 485 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00892 485 PANTHER CYTOCHROME P450 26 8 453 - -
Cme08g00892 485 Coils Coil 304 324 - -
Cme08g00892 485 SUPERFAMILY Cytochrome P450 30 455 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01196 Cme-Chr4:16338502 Cme08g00892 Cme-Chr8:5856568 1.59E-162 dispersed
Cme08g00892 Cme-Chr8:5856568 Cme10g01069 Cme-Chr10:9321685 3.07E-112 dispersed
Cme08g00892 Cme-Chr8:5856568 Cme01g02852 Cme-Chr1:35383310 5.02E-174 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00892 K12637 - csv:101203911 830.476