Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00907 ATGGATTCTCAATCTCTTCTTCAACCTCTTAATATGGCAGTCCCTTTCACACTCTCTTTTTTGTTTCTGCTGACACTTCTCTTCCGTCGTCTCCGGTCAAAACTACCCTTCCCACCTGGCCCCAAAGGCCTCCCCTTCATCGGCAACATGCTCATGATGGAACAGCTCACTCACCGTGGTCTCGCCAATCTTGCCGCCCGCTACGGCGGAATCTTCTATATGCGCATGGGCTTTGTTAACATGTTCGTTGTCTCCAATCCTGACATCGCTCGCCAAGTTCTTCAGGTCCATGATAGTATTTGTTCTAATCGTCCGGCCACCATCGCCATATCTTACTTAACCTACAATTGTGCCGACATGGCTTTTGCAAACTACGGCCCGTTCTGGCGACAGATGCGTAAGATTTGCGTCATGAAATTATTCAGCCGGAAGCGAGCTGAGTCATGGCAATCAGTCCGAGATATGGTGGACAACACCGTTAAAAAAGTCGCTGTCCAAACAGGGACCGCCGTGAACATTGGAGAGTTAGTGTTTGAATTAATGGGAGACATTATTTATAGAGCTGCGTTTGGGACGAGCACATTACAAGGTCAAGACGAGTTTATACGTATCTTACAGGAATTCTCTAAGCTTTTTGGAGCTTTTAATATCGCCGATTTCATTCCGAGTCTTAGATGGATTGACCCTCAAGGTTTGAACAAGAGGCTCGTTAAGGCTCGTCAATCGCTCGACAAATTTATCGACTCCATAATCGACGACCACATAATTAGAAAAAGGAACGCTTCTTCAAAATTACCAAATTATGAGCTTGAAACTGAGAGTGATATGGTGGATGAGTTACTGGCTTTTTACGGTGAAGATTCATCGATAAGAAATGCATCGGATGATCTAAAAAACAACATCAAACTCAACCGTGACAACATCAAAGGCATCATCATGGATGTTATGTTTGGTGGAACGGAGACGGTAGCGTCGGCGATAGAGTGGGCCATGTCGGAGCTAATGAGAAGCCCAGAAGATTTAAAGAAAGCACAGCAAGAACTCTCCCAAGTCGTTGGTCTCCAACGACGTGTCGAAGAAACCGACCTCGACAACTTGACTTTCTTAAAGTGCTGTCTCAAGGAGACTATCCGGCTGCACCCGCCGATCCCACTCCTCCTCCACGAGGCAGCGGAGGACGCGGTCATCGCCGGCTACTTCATTCCGGCGAAATCTCGGATCATGGTGAACGCGTGGGCCATCGGGAGGGATCCGGCCTCATGGGACGACGCCGAAACATTCCGTCCAACCAGGTTTCTGGAACAAGGAGTCCCAGATTTCAAAGGGAACAACTTTGAGTTCATTCCGTTCGGGTCGGGACGGCGGTCTTGCCCAGGGATGCAACTGGGTTTGTACGGACTTGAGATTGCGGTGGCCCAGTTGTTGCACTGTTTCGATTGGGAATTGCCGGATGGGATGAAGCCAAGCGAAATGGACATGAGCGACGTGTTCGGATTGACCGCTCCGAGAGCGACCCGGCTTGTGGCTGTGCCCACGAAACGAGTTTTGTGTCCACTTCTGTGA 1563 49.01 MDSQSLLQPLNMAVPFTLSFLFLLTLLFRRLRSKLPFPPGPKGLPFIGNMLMMEQLTHRGLANLAARYGGIFYMRMGFVNMFVVSNPDIARQVLQVHDSICSNRPATIAISYLTYNCADMAFANYGPFWRQMRKICVMKLFSRKRAESWQSVRDMVDNTVKKVAVQTGTAVNIGELVFELMGDIIYRAAFGTSTLQGQDEFIRILQEFSKLFGAFNIADFIPSLRWIDPQGLNKRLVKARQSLDKFIDSIIDDHIIRKRNASSKLPNYELETESDMVDELLAFYGEDSSIRNASDDLKNNIKLNRDNIKGIIMDVMFGGTETVASAIEWAMSELMRSPEDLKKAQQELSQVVGLQRRVEETDLDNLTFLKCCLKETIRLHPPIPLLLHEAAEDAVIAGYFIPAKSRIMVNAWAIGRDPASWDDAETFRPTRFLEQGVPDFKGNNFEFIPFGSGRRSCPGMQLGLYGLEIAVAQLLHCFDWELPDGMKPSEMDMSDVFGLTAPRATRLVAVPTKRVLCPLL 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5961591 5965184 + MELO3C007884.2.1 Cme08g00907 335170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00907 520 Pfam Cytochrome P450 38 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00907 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Cme08g00907 520 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00907 520 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00907 520 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00907 520 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00907 520 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00907 520 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00907 520 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00907 520 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00907 520 PANTHER CYTOCHROME P450 84A1-RELATED 2 519 - -
Cme08g00907 520 SUPERFAMILY Cytochrome P450 28 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00907 520 Gene3D Cytochrome P450 28 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00907 520 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00907 520 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00907 520 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme08g00907 520 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 2 519 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01350 Cme-Chr1:16873453 Cme08g00907 Cme-Chr8:5961591 0 dispersed
Cme08g00907 Cme-Chr8:5961591 Cme08g00815 Cme-Chr8:5390947 8.07E-134 dispersed
Cme10g00735 Cme-Chr10:4676600 Cme08g00907 Cme-Chr8:5961591 2.07E-16 dispersed
Cme07g01696 Cme-Chr7:22519046 Cme08g00907 Cme-Chr8:5961591 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00907 K09755 - csv:101205783 929.858