Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g00959 ATGGCCTCCTTTGCTGTGCTATTCTCACACTTTGCAATTCTTCTGCTGTCTGTTTTGTCTTTGGGAAGTTCATTGAGCTTAGACTACTATGAGAAGACATGCCCCGGTGCCGACTTCATCGTTACTAAAGCTGTCAGGGCTGCAGCATATAAAGACAAGACTGTTCCTGCTGCACTTCTCCGGATGCACTTTCATGACTGCTTTATTAGGGGTTGTGATGCATCTATACTGCTGAATTCTGTAGGGAACAACATAGCAGAGAAAGATGGGCCACCTAATCTGTCTTTGCACTCGTTTTTTGTGATCGACAATGCGAAGAAAGAACTGGAATCTTATTGTCCTGGTGTTGTCTCTTGTGCTGATATATTGGCTTTGGCTGCAAGAGATGCAATTGTGCTTTCTGGAGGTCCAACATGGGATGTTCCTAAAGGAAGAAAGGATGGAAGGATATCAAAGGCCAGTGAAACAATACAATTGCCATCTCCAAGCTTCAACATATCTCAGCTGCAACAGAGCTTCTCACAAAGGGGATTATCCCTGGACGACTTAGTTGCTCTTTCAGGAGGACACACCTTAGGATTTGCTCATTGCTCATCCTTCCAAGGTAGAATCCGCAACTTCAGTCCGGCCAGCAACGTTGACCCTGAAATGAACCCATCCTTCGCAGCAAGTCTACGAAACATGTGCCCAGTAAACAACAAGGTAAAAAATGCTGGGTCTAACATGGATACTTCTCCAACCACATTTGACAACAATTACTACAGATTGATACTCCAAAAGAAGGGCCTGTTTTCTTCTGATCAAGCTCTGCTCAACTTTCCTAAGACCAACAATCTTGTTTATAAGTTTGCAAGCTCAAAGGAAGCTTTTAACCGTGCATTTGTTAATTCTATGATCAAGATGAGTAGCATCACGGGAGGTCAGGAGATCAGGAAGAATTGTAGGGCAGTGAACTAA 957 43.68 MASFAVLFSHFAILLLSVLSLGSSLSLDYYEKTCPGADFIVTKAVRAAAYKDKTVPAALLRMHFHDCFIRGCDASILLNSVGNNIAEKDGPPNLSLHSFFVIDNAKKELESYCPGVVSCADILALAARDAIVLSGGPTWDVPKGRKDGRISKASETIQLPSPSFNISQLQQSFSQRGLSLDDLVALSGGHTLGFAHCSSFQGRIRNFSPASNVDPEMNPSFAASLRNMCPVNNKVKNAGSNMDTSPTTFDNNYYRLILQKKGLFSSDQALLNFPKTNNLVYKFASSKEAFNRAFVNSMIKMSSITGGQEIRKNCRAVN 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6309820 6311309 - MELO3C007935.2.1 Cme08g00959 335222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g00959 318 CDD secretory_peroxidase 28 317 IPR033905 GO:0004601|GO:0042744
Cme08g00959 318 SUPERFAMILY Heme-dependent peroxidases 25 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme08g00959 318 Gene3D Peroxidase, domain 2 160 301 - -
Cme08g00959 318 PANTHER PEROXIDASE 25-RELATED 10 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00959 318 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g00959 318 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g00959 318 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g00959 318 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g00959 318 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g00959 318 Pfam Peroxidase 42 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g00959 318 Gene3D - 28 318 - -
Cme08g00959 318 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00959 318 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00959 318 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00959 318 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00959 318 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00959 318 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00959 318 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00959 318 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00959 318 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme08g00959 318 ProSiteProfiles Plant heme peroxidase family profile. 24 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme08g00959 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cme08g00959 318 PANTHER PEROXIDASE 10 317 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01528 Cme-Chr3:24448350 Cme08g00959 Cme-Chr8:6309820 1.70E-158 dispersed
Cme06g00951 Cme-Chr6:6760364 Cme08g00959 Cme-Chr8:6309820 1.38E-118 dispersed
Cme08g00959 Cme-Chr8:6309820 Cme11g00772 Cme-Chr11:9621554 1.67E-91 dispersed
Cme08g00959 Cme-Chr8:6309820 Cme01g00411 Cme-Chr1:2907773 5.65E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g00959 K00430 - csv:101217954 603.208