Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g01047 TTAAATCTACAGGTGTGGTTGTCGAAACTAGGGAGGACAGAGGCTGAAACAAAGATTCCAAAACAAGAAATTCAATATAAAAAAATCAGCAGCTTCTTGCCCTTATATAAAGGACAGCCAAAGACCCAAAATTTTGCACTAAATTATCATTCTTTCACATTCATAAAAATGGATGCCAAGAAGCCTTACATAGTTGCAATTTTCATTCAAATTACTTTTGCCGGAATGAGCTTATTGTCAAAGGCTGCCTTCGCTACCGGCATGAATACATATATTTTCCTCTTCTATCGTCAAGCTGCTGGAAGTCTCATTTTAGTCCCACTAACTTTTCTTTTAAAAGGGAAGGAGAAGAGGCCATTATCTCTCAAACAGCTCTGCCATGTTTTCTTCATTTCATTGATAGGGATAACACTTGCAATGAATGCTTATGGAGTGGCCGTTGATTACACGTCAGCAACTCTTGGAGCTGCAGCCTTCAACTGCCTTCCTGTCTCAACCTTCATCTTCGCCGTCTTATTTAGAATGGAGAAAGTGAACTTAAAGAAAGCAGCAGGGATAGCAAAGGTGGCAGGAATGATGATATGTGTGGGAGGGGCAGCAATACTTGCATTCTACAAAGGACCATATCTAAAGCCAATAATATCACATCCACTTTTTCACATTGAGAAATCTGAAACCGACATTACTGCAACTTCTCAAAAGTCATGGTTGCTGGGGTGCTTCTTCCTGCTGGTAGCTACAGTGGGTTGGGGGATTTGGTTCGTGCTTCAAGCTAAGTTCTTGAAGGGTTACCCTCACCCAGTTGAATTCATGTGCGCCCAAACGGTGATGAGTGTGGTTCAGTGCTTTGTTGTGGCTATTATTGTGGAAAGAGATCCTTCGGAATGGAAATTGGGTTGGAATGTTAGACTCTATGCTGTTCTCTATTGTGGCATTTTGGTGATTGGAATTGCAAATAATGCACAATGTTGGGTAATCAAAGAAAAGGGTCCAGTCTTCCAAGCCATGATGATGCCATTGAATTTAGTTGCAACCATCATTGGTTCTCAGTTATTTTTGGCCGAAGGAATCTACTTGGGAAGTGTAATCGGTGCAATTTTGCTAGTCACAAGTCTTTACAGTGTTTTATGGGGAAAAAGCAAAGAGCTTGTGGTTACTCCTACTAACCAAGATCCACCATCGTCTCCCGATCCTCTACCACAAAAAGAGCCTAAAGAGCCCACCAATCGTTCTCAAGTTGACTCCACGATAGTCTAA 1257 41.45 LNLQVWLSKLGRTEAETKIPKQEIQYKKISSFLPLYKGQPKTQNFALNYHSFTFIKMDAKKPYIVAIFIQITFAGMSLLSKAAFATGMNTYIFLFYRQAAGSLILVPLTFLLKGKEKRPLSLKQLCHVFFISLIGITLAMNAYGVAVDYTSATLGAAAFNCLPVSTFIFAVLFRMEKVNLKKAAGIAKVAGMMICVGGAAILAFYKGPYLKPIISHPLFHIEKSETDITATSQKSWLLGCFFLLVATVGWGIWFVLQAKFLKGYPHPVEFMCAQTVMSVVQCFVVAIIVERDPSEWKLGWNVRLYAVLYCGILVIGIANNAQCWVIKEKGPVFQAMMMPLNLVATIIGSQLFLAEGIYLGSVIGAILLVTSLYSVLWGKSKELVVTPTNQDPPSSPDPLPQKEPKEPTNRSQVDSTIV 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6815908 6821191 + MELO3C008025.2.1 Cme08g01047 335310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g01047 418 MobiDBLite consensus disorder prediction 387 418 - -
Cme08g01047 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 96 204 - -
Cme08g01047 418 PANTHER WAT1-RELATED PROTEIN 61 392 - -
Cme08g01047 418 Pfam EamA-like transporter family 238 376 IPR000620 GO:0016020|GO:0016021
Cme08g01047 418 Pfam EamA-like transporter family 61 187 IPR000620 GO:0016020|GO:0016021
Cme08g01047 418 PANTHER WAT1-RELATED PROTEIN 61 392 IPR030184 GO:0016021|GO:0022857
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme08g01047 Cme11g00081 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g01047 Cme-Chr8:6815908 Cme08g01049 Cme-Chr8:6850257 2.06E-161 dispersed
Cme08g01053 Cme-Chr8:6871305 Cme08g01047 Cme-Chr8:6815908 9.46E-66 dispersed
Cme08g01054 Cme-Chr8:6872906 Cme08g01047 Cme-Chr8:6815908 1.13E-45 dispersed
Cme09g00340 Cme-Chr9:2897049 Cme08g01047 Cme-Chr8:6815908 1.78E-58 dispersed
Cme08g01047 Cme-Chr8:6815908 Cme08g01048 Cme-Chr8:6838691 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g01047 - - csv:101208318 684.1