Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme08g01049 | ATGGGTTCAAAAAAACCCTATTTTGTAGCAATAGCAACACAAGTATTTCTTGCTGGAATGAGTCTTCTTTCTAAAGCAGCTTTTGCTTCGGGAATGAATACCTTCGTGTTTGTGTTCTATAGACAAGCTGCTGGAGCTGTTTTTTTCCTTCCTCTTCTGTTTTTTTTAAGAAGAAAAGAAAGCCGATCACTTTCACTTAAAGATTTCTTGAAAATTTTCGTGATTTCGTTAATAGGGATGACTGTTGGATTTAATGCCTATGGTGTTGCTGTTGATTATACATCTGCAAACTTGGGTGCTGCTGCATTTAATTGCCTCCCTGTCACAACATTTCTTTTCGCTGTTTTATTGAGGATGGAGAAAGTAAATTTAAGAAAAGTGGCAGGAATTGCAAAAGCTTTTGGAATATTAATATGCATTGGAGGAGTGATAACACTTGCATTCTACAAAGGTCCATATTTGAAGCCACTCATCAACCATCACCTTTTGAAACTTCACAAATCATCACATAATATTCCTCATTCTTCCTCTTCTAAAACTTGGATTATTGGCTGTTTCCTTCTCTTCGTCTCCAGCATCTCTTGGGGTTTGTGGTTTGTTCTTCAGGCTTATTTTCTCAAGACATACCCATCACCTTTGGAGTTTATAAGTTACCAAACATTATTAAGCGCAGCCCAATCTTTTGTGATTGCTATTGCAATGGAAAGAGACCCTTCTGAGTGGAAATTGGGTTGGAACATTAGGCTTCTTGCTGTCGTTTATTGTGGAGTTCTTGTAACAGTTGTTTCGAATTTCTTACAATGTTGGGTAATAAAAGAGAAGGGGCCAGTTTTTCAAGCCATGACAACACCATTGAATGTCATTGCCACTATTATTGGCTCTGAATTGCTTTTGGGTGAAGGAATCAACTTGGGAAGTCTTATTGGTGCCATTTTGTTGGTGATAAGTCTCTACAGTGTATTATGGGGAAAAAGCAAAGAGCTCAACATGGTTGATTCAGATAGTAACATCCAAACAAATGTATTTGTTTCACCTCAATTACCAAAAGATTTGTCAGAGATGAGACCAACGGCTGAACCATAG | 1083 | 37.67 | MGSKKPYFVAIATQVFLAGMSLLSKAAFASGMNTFVFVFYRQAAGAVFFLPLLFFLRRKESRSLSLKDFLKIFVISLIGMTVGFNAYGVAVDYTSANLGAAAFNCLPVTTFLFAVLLRMEKVNLRKVAGIAKAFGILICIGGVITLAFYKGPYLKPLINHHLLKLHKSSHNIPHSSSSKTWIIGCFLLFVSSISWGLWFVLQAYFLKTYPSPLEFISYQTLLSAAQSFVIAIAMERDPSEWKLGWNIRLLAVVYCGVLVTVVSNFLQCWVIKEKGPVFQAMTTPLNVIATIIGSELLLGEGINLGSLIGAILLVISLYSVLWGKSKELNMVDSDSNIQTNVFVSPQLPKDLSEMRPTAEP | 360 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 6850257 | 6854318 | + | MELO3C008027.2.1 | Cme08g01049 | 335312 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme08g01049 | 360 | PANTHER | WAT1-RELATED PROTEIN | 5 | 336 | IPR030184 | GO:0016021|GO:0022857 | |
Cme08g01049 | 360 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 40 | 148 | - | - | |
Cme08g01049 | 360 | Pfam | EamA-like transporter family | 183 | 321 | IPR000620 | GO:0016020|GO:0016021 | |
Cme08g01049 | 360 | Pfam | EamA-like transporter family | 5 | 138 | IPR000620 | GO:0016020|GO:0016021 | |
Cme08g01049 | 360 | PANTHER | WAT1-RELATED PROTEIN | 5 | 336 | - | - | |
Cme08g01049 | 360 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 239 | 325 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme08g01047 | Cme-Chr8:6815908 | Cme08g01049 | Cme-Chr8:6850257 | 2.06E-161 | dispersed | |
Cme08g01049 | Cme-Chr8:6850257 | Cme08g01059 | Cme-Chr8:6911230 | 9.91E-143 | dispersed | |
Cme08g01055 | Cme-Chr8:6872906 | Cme08g01049 | Cme-Chr8:6850257 | 4.12E-58 | dispersed | |
Cme08g01060 | Cme-Chr8:6915776 | Cme08g01049 | Cme-Chr8:6850257 | 1.22E-72 | dispersed | |
Cme08g01048 | Cme-Chr8:6838691 | Cme08g01049 | Cme-Chr8:6850257 | 1.97E-159 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme08g01049 | - | - | csv:101219744 | 661.759 |