Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g01155 TCATTTCTTCGCCTTTGCATTTCGACGGGAGACCTGAAAAAGGCGGAAAAAGGCAATAGAAGCATCCCGTGGCTGAATAAATTCTGTTTATCAATCGGCTTCTTCTTGATCAAGCTCTTCTCTCCCCGACCACCATACCACATTGGGTCGGAAAAAAACATTCCATCTCCAATGGGAGTTCCACAGGCCATGGAAATTCTCACCCAGAGAGCCGCACTTGTTCGAGAGTCGCTTCAAAAGAGCCAGAATGTCACCGAGAACATGGTCTCCATTCTTGGCTCCTTCGACTACCGTCTCTCCGCCCTCGAAACCGCAATGCGCCCTACTCAGATAAGAACTCATTCAATTCGGAGGGCGCATGAAAATATTGACAAGACATTGAAGGCTGCAGAAAGTATGCTGGCTCAGTTTGATCTTACACGCAAGGCCGAGGCTAAAATACTCAGGGGACCACATGAGGACTTAGAGATGTACTTGGAAGCAATTGATCAATTACGAAGCACAAATCGCTACTTTACTGGGAACAAAAATTTCAAATGTAACGAAGCTATTCTTATCCACACAAGCAACTTGCTTGTTAAAGCAATTTCAAAGCTAGAAGATGAATTCAGACAGCTTTTAACAAATTACAGTAAGCCCGTGGAACCTGATCGTCTATTTGATTGCCTCCCCAACAATTTGCGTCCATCATCAGCATCTTCACACCATGGTGACAGTGGTAGCAAAAATAACTCTGACAATCACAACAAAAGCTTAGAAGCTGCCGTCTTCATTCCACCAACTCTAATTCCGCCCAGGGTTCTTCCATTGTTGCATGACTTGGCTCAACAAATGATTCAGGCTGGTCATCAGCAGCAACTGTTTAGAATATACAGGGATACTCGCGCTTCAGTTTTAGAACAGAGTCTTAGGAAATTAGGTGTTGAGAGGCTTACCAAGGATGATGTCCAGAAAATGCAGTGGGAGGCTCTTGAAGCTAAGATTGGGAACTGGATACATTACATGCGCATTGCTGTCAAATTGCTGTTTGCTGGGGAAAGGAAAATCTGTGATCAAATTTTTGACGGTGCAGACTCTCTCCAAGATCAATGCTTCGCTGATGTGACTTCAAACAGTGTGTCAGTGCTACTAAGTTTTGGAGAGGCCATTGCCAGAAGCAAGAGATCTCCAGAAAAATTGTTTGTTCTTTTAGACATGTATGAAATAATGCGAGAACTGCAGTCTGAGATTGAAACACTTTTTGGAAGTAAAGCATGTATTGAAATGCGGGATTCTGCATTGAGCTTAACCACACGCCTTGCCGAGACAGCTCAAGAGACCTTTGTTGATTTTGAAGAAGCCGTAGAAAAAGATGCCACAAAAACGGCAGTTCTGGATGGGACTGTTCATCCCTTGACTAGTTATGTGATAAATTACGTCAAGTTTCTGTTTGACTACCAATCTACTTTGAAGCAGCTATTCCAAGATTTTGACGCTAGTGATCCAGATGCTCAGATAGCAGTGGTAACTACAAGAATCATGCAGGCCCTTCAGACTAATCTTGATGGGAAATCTAAACAATATAGGGATCCTGCACTGACTCAATTATTTCTTATGAACAATATTCACTATATTGTGAGATCCGTCCGAAGATCGGAGGCAAAGGATTTGCTGGGTGATGACTGGGTGCAGATACATCGAAGGGTTGTGCAGCAGCATGCAAATCAATACAAGCGGATTTCTTGGGCAAAGATTTTGCAGTGCCTCACAGTTCAGGCCTCAGGTAGTGGTGGTGGTTCGGGAGATGCTAGCAGTGGACTTTCAAGAGCTATGGTGAAAGATAGGTTTAAGACTTTCAACATCCAATTTGAAGAGCTTCATCAACGGCAATCTCAGTGGACAGTTCCTGACAGTGAGTTGCGGGAGTCATTAAGGTTGGCAGTAGCTGAAGTTTTATTGCCTGCCTACCGATCCTTCATCAAGCGTTTCGGCAGGCCTATGATTGAGAATGGGAAAAATCCTCAAAAATACATCAGATATTCACCGGAGGATCTCGAGCGTATGCTGAATGAATTTTTTGAGGGCAAGACATTCAGTGAGCAAAAGCGCTAG 2091 43.76 SFLRLCISTGDLKKAEKGNRSIPWLNKFCLSIGFFLIKLFSPRPPYHIGSEKNIPSPMGVPQAMEILTQRAALVRESLQKSQNVTENMVSILGSFDYRLSALETAMRPTQIRTHSIRRAHENIDKTLKAAESMLAQFDLTRKAEAKILRGPHEDLEMYLEAIDQLRSTNRYFTGNKNFKCNEAILIHTSNLLVKAISKLEDEFRQLLTNYSKPVEPDRLFDCLPNNLRPSSASSHHGDSGSKNNSDNHNKSLEAAVFIPPTLIPPRVLPLLHDLAQQMIQAGHQQQLFRIYRDTRASVLEQSLRKLGVERLTKDDVQKMQWEALEAKIGNWIHYMRIAVKLLFAGERKICDQIFDGADSLQDQCFADVTSNSVSVLLSFGEAIARSKRSPEKLFVLLDMYEIMRELQSEIETLFGSKACIEMRDSALSLTTRLAETAQETFVDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQSTLKQLFQDFDASDPDAQIAVVTTRIMQALQTNLDGKSKQYRDPALTQLFLMNNIHYIVRSVRRSEAKDLLGDDWVQIHRRVVQQHANQYKRISWAKILQCLTVQASGSGGGSGDASSGLSRAMVKDRFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRFGRPMIENGKNPQKYIRYSPEDLERMLNEFFEGKTFSEQKR 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8162163 8170295 + MELO3C024585.2.1 Cme08g01155 335418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g01155 696 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 93 693 - -
Cme08g01155 696 Pfam Exo70 exocyst complex subunit 330 684 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cme08g01155 696 MobiDBLite consensus disorder prediction 225 248 - -
Cme08g01155 696 SUPERFAMILY Cullin repeat-like 133 687 IPR016159 -
Cme08g01155 696 Gene3D Exocyst complex component Exo70 132 696 - -
Cme08g01155 696 MobiDBLite consensus disorder prediction 226 248 - -
Cme08g01155 696 PANTHER EXOCYST COMPLEX PROTEIN EXO70 93 693 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g02110 Cme-Chr3:28354220 Cme08g01155 Cme-Chr8:8162163 2.41E-46 dispersed
Cme08g01155 Cme-Chr8:8162163 Cme10g00165 Cme-Chr10:1139854 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g01155 K07195 - csv:105436019 1208.36