Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme08g01206 | ATGGCGGAAGAGCACAGATGCCAAGCACCTGAAGGTCACCGTCTCTGCGCCAATAACTGTGGATTCTTTGGTAGCCCAGCTACCATGGATCTCTGCTCCAAATGTTATAGAGATTTCCGTCTTAAAGAACAAGAACAAGCCTCCACAAAGTCCACCATCCAAGCCGCTCTCTCGGCCTCATCATCTCCTTCTCCTTCCTCTTCCCCAATCGATCCTCCCCCTGTTCCTCCTGTTGTCGCCTTGTCCCTGCCGGACACCACCACAGATCTGACCATCCCTCCCCTTGCGGCGGTCGGATCTGATGTCACAAACCCCAGCCCGAGCCCGAGCCCGAACCGTTGTTCATCGTGCCGTAAGAAGGTGGGTTTGACCGGGTTCAAATGCAGATGTGGAACCACGTTCTGTGGGGCTCATAGGTACCCGGAGAAACACGGCTGCACCTTCGACTTCAAGTCAATCGGAAGAGAGGAGATTGCTCGAGCAAACCCCGTCGTCAAAGCCGACAAACTAGAGAGGATTTGA | 522 | 54.41 | MAEEHRCQAPEGHRLCANNCGFFGSPATMDLCSKCYRDFRLKEQEQASTKSTIQAALSASSSPSPSSSPIDPPPVPPVVALSLPDTTTDLTIPPLAAVGSDVTNPSPSPSPNRCSSCRKKVGLTGFKCRCGTTFCGAHRYPEKHGCTFDFKSIGREEIARANPVVKADKLERI | 173 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 8505068 | 8506504 | - | MELO3C024538.2.1 | Cme08g01206 | 335469 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme08g01206 | 173 | SMART | A20_3 | 13 | 37 | IPR002653 | GO:0003677|GO:0008270 | |
Cme08g01206 | 173 | SMART | AN1_Zf_4 | 114 | 151 | IPR000058 | GO:0008270 | |
Cme08g01206 | 173 | MobiDBLite | consensus disorder prediction | 47 | 65 | - | - | |
Cme08g01206 | 173 | Gene3D | - | 96 | 169 | IPR035896 | - | |
Cme08g01206 | 173 | MobiDBLite | consensus disorder prediction | 92 | 111 | - | - | |
Cme08g01206 | 173 | ProSiteProfiles | Zinc finger AN1-type profile. | 108 | 154 | IPR000058 | GO:0008270 | |
Cme08g01206 | 173 | ProSiteProfiles | Zinc finger A20-type profile. | 10 | 44 | IPR002653 | GO:0003677|GO:0008270 | |
Cme08g01206 | 173 | PANTHER | ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 6 | 1 | 173 | - | - | |
Cme08g01206 | 173 | MobiDBLite | consensus disorder prediction | 47 | 86 | - | - | |
Cme08g01206 | 173 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 15 | 58 | - | - | |
Cme08g01206 | 173 | Gene3D | - | 1 | 69 | - | - | |
Cme08g01206 | 173 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 1 | 173 | - | - | |
Cme08g01206 | 173 | Pfam | A20-like zinc finger | 14 | 37 | IPR002653 | GO:0003677|GO:0008270 | |
Cme08g01206 | 173 | MobiDBLite | consensus disorder prediction | 66 | 80 | - | - | |
Cme08g01206 | 173 | SUPERFAMILY | AN1-like Zinc finger | 102 | 168 | IPR035896 | - | |
Cme08g01206 | 173 | Pfam | AN1-like Zinc finger | 114 | 150 | IPR000058 | GO:0008270 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme05g00146 | Cme-Chr5:990952 | Cme08g01206 | Cme-Chr8:8505068 | 2.07E-43 | dispersed | |
Cme06g00925 | Cme-Chr6:6487973 | Cme08g01206 | Cme-Chr8:8505068 | 9.13E-31 | dispersed | |
Cme08g01206 | Cme-Chr8:8505068 | Cme11g01922 | Cme-Chr11:27311260 | 4.82E-56 | dispersed | |
Cme08g01206 | Cme-Chr8:8505068 | Cme01g02485 | Cme-Chr1:32943566 | 1.27E-49 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme08g01206 | - | - | csv:101211758 | 298.516 |