Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g01214 ATGGGCGACTTGCCCGCCGGATCTCCCTCGACCACGGTGGCGGATGACCACCATAATCTGCTTTTGGACGCCATTGGAGATGAAAAGATAGCGAGAGAATCCAAAATATACAGCTATGGAAAGAGCTTCAATGGGTTCGCTGCCAGACTTTTGCCTCACGAAGCCACCAAAATCTCAAATGAGGAGAGTGTGGTTTCGGTGTTTGAGAGCAGAAAGAAGAGAGTTGTGACGACAAGATCATGGGATTTTTTGGGTTTAAATCATCGTTATTCCAAACGTAACCCATTAATCGAGTCTAATCTCATTATCGCCGTTTTTGATACGGGGATTTGGATAGATAGTCCTAGCTTCAGCGATGAAGGTTATGGTCCACCTCCCCCTAAATGGAAGGGCAAATGTGTCACCGGGCCCAACTTCACTGCATGCAACAACAAAGTGATCGGTGCCAATTACTTCGATCTAGCCAAAGTAAGCTCATATCCAGAGTTGAGCGTTGCGGACACGGAGGGCCATGGTTCTCACACGGCGTCTACTGTGGCCGGTTCGGCGGTGGCGGGTGCAAGCTTGTACGGCCTGGCCAAAGGGACGGCGCGCGGCGGGGTGCCTTCAGCTCGGATTGCAGTCTACAAAGTGTGCTGGAGTATTTTCTGCAACGAAATGGACGTTCTTGCTGCCTTCGATGAGGCCATCGCTGACGGCGTCGATTTAATTTCGGTCTCCATAGGTTCGCCGGCGATGGATTTCTTCAGGGATGGGCAGGCAATTGGGGCTTTTCATGCCATGAAGAAGGGAATTTTGACTACCGCCGCGGCCGGCAACGACGGCCCTCAATTGTCCACCGTGGAGAATGTGGCGCCGTGGATTATGACCGTCGCTGCAACGGCCATTGATAGAGGATTCGTCACCTCTTTCGAACTCGGTAATGGCAATAAATTGACTGGAGGTTCCATCAACACTTTCTCTCCACAGAAACAAATGTACTCTCTTACAAGCGGGGCCAAAGCCGCCTCCAACAATGCCACACCCCATCAAGGAAATGCAAGTGCTTGTGATCCAAATGCTATCAACCAAAGCAAGGTGAAGGGAAAGATTGTATATTGCTTGAAAACCTATACAGATCCCTCCATCAAATCCTTAGGAGGCACTGGAGTCATTCAACTCACTACACAACAAACCGATTATTCCTCTATTTTGCTTCTTCCTGGGGCTACCATCCCTTCTGTTTCTGGCAAATACATTGATCTTTATATCAATTCCACCAAGAATCCTAAAGCTGTGATTTACAAGAGTGAAACTGTCAAAATTGATGCTCCCTTTGTTGCCTCTTTCTCTTCTAGAGGGCCTCAGCGTATCAGTAGTAACATTCTCAAGCCTGATCTTTCTGCACCAGGGATAGACATCTTGGCTGCTTATACAAAACTAGCAACTTTGACAGGAGATACGTCAGACAGTAGATATAGTTTTTTCACTGTAATGTCAGGTACTTCCATGGCATGTCCTCATGCCACGGCAGCTGCAGCGTATGTTAAGTCATTTCACCCTGACTGGTCTCCGGCTGCGGTCAAGTCTGCTCTCATGACCACTGCAACTCCAATGAAGATCAAATCTAAAGATGCTATGCTCGGCTCTGGAGCAGGACAAATAAATCCAACCAAGGCAGTGCATCCGGGCCTTGTTTATAATATCTCGTTTAACTCCTACATCTCATTCCTCTGCAAAGAAGGCTACAATAGCACAACAATTGGCTTACTTGGTGGTAGCAAAAAGTATAATTGCACCAAAATCAAGCCTGCACAAGGAACCGATGGTCTCAACTATCCTACAATGCACAAACAGCTCTCAGGTCCTAGTTCTACCATTGAGGCGGTCTTTTATCGAACAGTAACTCATGTCGGGTATGGTGCATCGTTGTACAGGGCAAATATATCATCCCCAGCTAGCCTATCTGTCAAAGTCTTTCCAGACACCCTAAATTTTGTTAAGTTACATGAAACAAAGACGTTTAAAGTTGTAGTGAAGGGCAAACCTATGCCAAAAGGAACACAGATTCTATCAGCTTTACTTGAATGGACCGACTCTAAACACATAGTTAGAAGCAATATCCTTATCTACAGGAAACTGATCTAA 2127 46.69 MGDLPAGSPSTTVADDHHNLLLDAIGDEKIARESKIYSYGKSFNGFAARLLPHEATKISNEESVVSVFESRKKRVVTTRSWDFLGLNHRYSKRNPLIESNLIIAVFDTGIWIDSPSFSDEGYGPPPPKWKGKCVTGPNFTACNNKVIGANYFDLAKVSSYPELSVADTEGHGSHTASTVAGSAVAGASLYGLAKGTARGGVPSARIAVYKVCWSIFCNEMDVLAAFDEAIADGVDLISVSIGSPAMDFFRDGQAIGAFHAMKKGILTTAAAGNDGPQLSTVENVAPWIMTVAATAIDRGFVTSFELGNGNKLTGGSINTFSPQKQMYSLTSGAKAASNNATPHQGNASACDPNAINQSKVKGKIVYCLKTYTDPSIKSLGGTGVIQLTTQQTDYSSILLLPGATIPSVSGKYIDLYINSTKNPKAVIYKSETVKIDAPFVASFSSRGPQRISSNILKPDLSAPGIDILAAYTKLATLTGDTSDSRYSFFTVMSGTSMACPHATAAAAYVKSFHPDWSPAAVKSALMTTATPMKIKSKDAMLGSGAGQINPTKAVHPGLVYNISFNSYISFLCKEGYNSTTIGLLGGSKKYNCTKIKPAQGTDGLNYPTMHKQLSGPSSTIEAVFYRTVTHVGYGASLYRANISSPASLSVKVFPDTLNFVKLHETKTFKVVVKGKPMPKGTQILSALLEWTDSKHIVRSNILIYRKLI 708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8559979 8564690 + MELO3C024530.2.1 Cme08g01214 335477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g01214 708 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 75 IPR037045 -
Cme08g01214 708 Gene3D Peptidase S8/S53 domain 101 567 IPR036852 GO:0004252|GO:0006508
Cme08g01214 708 PRINTS Subtilisin serine protease family (S8) signature 493 509 IPR015500 -
Cme08g01214 708 PRINTS Subtilisin serine protease family (S8) signature 98 117 IPR015500 -
Cme08g01214 708 PRINTS Subtilisin serine protease family (S8) signature 167 180 IPR015500 -
Cme08g01214 708 CDD PA_subtilisin_like 306 427 - -
Cme08g01214 708 Pfam Fibronectin type-III domain 604 703 IPR041469 -
Cme08g01214 708 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 10 705 IPR045051 -
Cme08g01214 708 ProSitePatterns Serine proteases, subtilase family, serine active site. 494 504 IPR023828 -
Cme08g01214 708 PANTHER CUCUMISIN PROTEIN 10 705 - -
Cme08g01214 708 CDD Peptidases_S8_3 77 530 IPR034197 -
Cme08g01214 708 Pfam Subtilase family 99 540 IPR000209 GO:0006508|GO:0008236
Cme08g01214 708 SUPERFAMILY Subtilisin-like 85 554 IPR036852 GO:0004252|GO:0006508
Cme08g01214 708 Pfam Peptidase inhibitor I9 12 72 IPR010259 -
Cme08g01214 708 ProSiteProfiles Serine proteases, subtilase domain profile. 80 554 - -
Cme08g01214 708 Gene3D - 571 706 - -
Cme08g01214 708 Gene3D - 297 433 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme04g02414 Cme08g01214 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g01214 Cme-Chr8:8559979 Cme10g01530 Cme-Chr10:19427375 0 dispersed
Cme04g02414 Cme-Chr4:30779716 Cme08g01214 Cme-Chr8:8559979 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g01214 - - csv:101207592 1303.12