Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g01239 ATGGTGTTGAAGACCGAGCTTTGTCGATTCAGTGGTGCGAAGATATATCCCGGTAAAGGAATCAGATTTGTCCGGGCTGATTCACAGGTTTTCCTGTTTGCTAACTCCAAATGCAAGAGGTACTTCCATAACAGACTGAAGCCTTCTAAGCTCACCTGGACAGCAATGTACAGGAAGCAACATAAGAAGGACATTGCTCAAGAGGCTGTAAAGAAGAGGAGACGTGCCACCAAAAAACCCTACTCAAGGTCCATTGTTGGTGCTACATTGGAGGTGATCCAAAAGAAGAGATCTGAGAAGCCTGAGGTTCGCGATGCTGCAAGGGAAGCAGCCCTCCGGTACGTGATTGTTCTAAGTGTGAAATATCATCTATCATTTGTATCCTACGTTTCTAACAACCACTAA 405 45.19 MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYVIVLSVKYHLSFVSYVSNNH 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8836752 8838479 - MELO3C024506.2.1 Cme08g01239 335502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g01239 134 PANTHER OS05G0486700 PROTEIN 1 115 - -
Cme08g01239 134 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Cme08g01239 134 SMART 4TRASH 8 46 IPR011017 -
Cme08g01239 134 Gene3D - 69 115 - -
Cme08g01239 134 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Cme08g01239 134 PANTHER 60S RIBOSOMAL PROTEIN L24 1 115 IPR000988 -
Cme08g01239 134 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Cme08g01239 134 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Cme08g01239 134 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme04g02450 Cme08g01239 CCT
Cme04g02450 Cme08g01239 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02450 Cme-Chr4:31091627 Cme08g01239 Cme-Chr8:8836752 3.22E-77 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g01239 K02896 - csv:101206866 226.098