Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme08g01239 | ATGGTGTTGAAGACCGAGCTTTGTCGATTCAGTGGTGCGAAGATATATCCCGGTAAAGGAATCAGATTTGTCCGGGCTGATTCACAGGTTTTCCTGTTTGCTAACTCCAAATGCAAGAGGTACTTCCATAACAGACTGAAGCCTTCTAAGCTCACCTGGACAGCAATGTACAGGAAGCAACATAAGAAGGACATTGCTCAAGAGGCTGTAAAGAAGAGGAGACGTGCCACCAAAAAACCCTACTCAAGGTCCATTGTTGGTGCTACATTGGAGGTGATCCAAAAGAAGAGATCTGAGAAGCCTGAGGTTCGCGATGCTGCAAGGGAAGCAGCCCTCCGGTACGTGATTGTTCTAAGTGTGAAATATCATCTATCATTTGTATCCTACGTTTCTAACAACCACTAA | 405 | 45.19 | MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALRYVIVLSVKYHLSFVSYVSNNH | 134 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 8836752 | 8838479 | - | MELO3C024506.2.1 | Cme08g01239 | 335502 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme08g01239 | 134 | PANTHER | OS05G0486700 PROTEIN | 1 | 115 | - | - | |
Cme08g01239 | 134 | CDD | Ribosomal_L24e_L24 | 3 | 56 | IPR000988 | - | |
Cme08g01239 | 134 | SMART | 4TRASH | 8 | 46 | IPR011017 | - | |
Cme08g01239 | 134 | Gene3D | - | 69 | 115 | - | - | |
Cme08g01239 | 134 | Gene3D | Ribosomal protein L24e | 3 | 64 | IPR038630 | - | |
Cme08g01239 | 134 | PANTHER | 60S RIBOSOMAL PROTEIN L24 | 1 | 115 | IPR000988 | - | |
Cme08g01239 | 134 | ProSitePatterns | Ribosomal protein L24e signature. | 10 | 27 | IPR023442 | - | |
Cme08g01239 | 134 | Pfam | Ribosomal protein L24e | 4 | 67 | IPR000988 | - | |
Cme08g01239 | 134 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 6 | 58 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cme04g02450 | Cme08g01239 | CCT | |
Cme04g02450 | Cme08g01239 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme04g02450 | Cme-Chr4:31091627 | Cme08g01239 | Cme-Chr8:8836752 | 3.22E-77 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme08g01239 | K02896 | - | csv:101206866 | 226.098 |