Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g01242 ATGAAGTTCCCGGTTTTTGTAATTCCCCTCATCGCCATTTCTTGTTTTCTTGCTCTTTTCGCTCCTCAGTTCAACACCGATTGGACCATTTTCTTTCATAAATCTGCTCCAATCCACCCCTCTCTTTCTTATTCCTTCAAAAGAGAGGAATTTCATTCTAATACCTCCGTTTCGGTAGCGGCGGACGAGGCTGCGGCGGCGGCGAATGTCTCTGTTCTTTCTTTTTCTTCCCCACCGCCACCAGTGAACGACGAAAAGCAAAGTCTTCAACTACACCCAAACAGGACGAGAGTCAACGAAGATTTGGGAGAAACCGCGACCGCCATTAATGGAGTGATCAGAAACGTTTCTAATGATAGTAGTTATGAATCAGCGGTGAAAGTGAGAGCAAGAAGACAGAGAGAATATACAAAATTGGAGAGAATTGAAGCAGGGTTAAGAAGAGCAAGAGCCGCCATTAGAGAAGCTAAGTTCCTTAATCAAACACAAGATCCTGACTTCGTGCCTTCTGGTCCAATGTATTGGAATTCCAAAGCATTTCACAGGAGTTACCTTGAGATGGAGAAGGAGATGAAGATCTTTGTGTACGAAGAAGGAGAGCCTCCCCTGTTTCACAATGGCCCTTGCAAGAGCATTTACTCAACTGAAGGTAACTTCATCCACGCCATCGAAATGGACTCCCAATTTCGAACCAAAGATCCCAACAAGGCCCATGTCTTCTTCCTTCCTCTAAGTGTTGCCATGCTCGTTCGGTTCGTCTATGTTCACGACTCACATGACTTCACTCCAATACGACACACCGTCATTGATTACATCAATGTCATTGGAACCAAATACCCGTTTTGGAATCGCTCACTCGGTGCTGATCATTTTATGCTCTCCTGCCATGATTGGGGTCCTGAAGCATCGAAGTCGGTTCCCAATCTATACAAAAACTCGATTCGAGTACTGTGTAATGCAAACACCTCCGAGGGCTTCAACCCATCAAAGGACGTATCATTCCCAGAAATCAATCTACAAACAGGTTACCTGACTGGATTTCTTGGCGGCCCATCTCCCTCCCACCGCCCAATCCTGGCCTTCTTCGCCGGTGGGCTTCACGGCCCAATAAGGCCCATTCTAATCCAACAGTGGGAGAACCAAGACCAAGACATTCAAGTCCACCAATATCTCCCCAAGGGCGTCGTCTCCTACATTGACATGATGAGGAAGAGCAAGTTCTGTCTCTGCCCCAGCGGCTACGAAGTTGCCAGCCCTAGGATTGTCGAGGCCATTTACACCGGCTGCGTTCCTGTCCTCATTTCCGACCACTACGTCCCACCATTCAGCGACGTAATCAATTGGAAATCTTTCTCTGTTGAGGTCTCGGTCGACGAAATTCCAAACTTGAAGACGATCTTGACAGGAATATCGACACGGCAGTACTTGAGAATGTATAGGAGGGTGGTGAAAGTTAGGAGACACTTTGAAGTAAACTCTCCGCCGAAGAGATATGATGTGTATCATATGATTTTACATTCTGTATGGCTTAGAAGACTCAATCTTAGACTACGTTGA 1557 46.44 MKFPVFVIPLIAISCFLALFAPQFNTDWTIFFHKSAPIHPSLSYSFKREEFHSNTSVSVAADEAAAAANVSVLSFSSPPPPVNDEKQSLQLHPNRTRVNEDLGETATAINGVIRNVSNDSSYESAVKVRARRQREYTKLERIEAGLRRARAAIREAKFLNQTQDPDFVPSGPMYWNSKAFHRSYLEMEKEMKIFVYEEGEPPLFHNGPCKSIYSTEGNFIHAIEMDSQFRTKDPNKAHVFFLPLSVAMLVRFVYVHDSHDFTPIRHTVIDYINVIGTKYPFWNRSLGADHFMLSCHDWGPEASKSVPNLYKNSIRVLCNANTSEGFNPSKDVSFPEINLQTGYLTGFLGGPSPSHRPILAFFAGGLHGPIRPILIQQWENQDQDIQVHQYLPKGVVSYIDMMRKSKFCLCPSGYEVASPRIVEAIYTGCVPVLISDHYVPPFSDVINWKSFSVEVSVDEIPNLKTILTGISTRQYLRMYRRVVKVRRHFEVNSPPKRYDVYHMILHSVWLRRLNLRLR 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8857511 8860694 - MELO3C024503.2.1 Cme08g01242 335505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g01242 518 Pfam Exostosin family 188 468 IPR040911 -
Cme08g01242 518 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Cme08g01242 518 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 114 517 IPR004263 GO:0006486|GO:0016757
Cme08g01242 518 PANTHER EXOSTOSIN FAMILY PROTEIN 114 517 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01415 Cme-Chr3:23572636 Cme08g01242 Cme-Chr8:8857511 1.42E-22 dispersed
Cme03g01604 Cme-Chr3:24990815 Cme08g01242 Cme-Chr8:8857511 8.20E-145 dispersed
Cme04g00433 Cme-Chr4:3427642 Cme08g01242 Cme-Chr8:8857511 1.19E-40 dispersed
Cme05g01881 Cme-Chr5:27582484 Cme08g01242 Cme-Chr8:8857511 8.99E-132 dispersed
Cme08g01242 Cme-Chr8:8857511 Cme09g00106 Cme-Chr9:804369 4.88E-170 dispersed
Cme09g00400 Cme-Chr9:3677066 Cme08g01242 Cme-Chr8:8857511 1.16E-16 dispersed
Cme12g00344 Cme-Chr12:4762192 Cme08g01242 Cme-Chr8:8857511 2.75E-11 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g01242 - - csv:101205910 987.638