Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme08g01245 | ATGCAGCTTCGAGTCATTGGCTTCTTGCTTCCCTTCATCCTTCTAGCTCTCATTTTTCCGGTGGCTATCACTGATCCTCTTGTCCCTGCACTCTGCATCTTCGGTGACTCGGTGGTCGACGTCGGAAATAACAACAATCTTCTAACAGTTGTCAAGGCTAACTTCCCTCCTTATGGAAGAGACTTTGTTACTCACACACCAACAGGAAGGTTTTGCAATGGCAAGCTTGCCACTGATTTTACTGCTGAAAACCTTGGATTTTCTTCATATCCTCCTGCGTATTTGAGCCAGGATGCTACTGGAAACAAGCTTTTAACAGGAGCTAACTTTGCTTCTGCTGCTTCTGGCTTTTATGATGGCACCGCTCAGCTCTATCATGCAGTTTCACTAACTCAGCAGTTGAATTATTACAAGGAATATCAAAGCAAAGTTGTAAACATGGTGGGAACAGAGAAAGCCAACGCTATATTCTCTGGTGCAATTCATCTTCTTAGTGCAGGCAGCAGTGATTTCATTCAGAATTACTATGTTAATCCTCTTCTTTACAGAACGTACTCGCCACAGCAGTTCTCTGACATTCTCATTACATCTTTCTCTAACTTCATTCAGAACTTATATGGAATGGGAGCAAGGAGGATAGGGGTGACAGGATTACCTCCATTGGGTTGCTTGCCAGCAGCTATAACCCTCTTTGGTTCTGGCAGCAATCAGTGCATCCAAAGGTTAAATCAAGATGCCATTGCATTCAACACTAAGCTGCAAAGCGCAACGAGTAGTTTGCAGAACAGATTCTCTGATCTCAAGCTTGTTGCCTTTGATATTTATCAACCTCTCTTGAATATGGTCTCAAAGCCTGCAGAAAATGGGTTTTTCGAGTCGAGAAGGGCTTGTTGTGGAACAGGAACAGTAGAGACCTCCTTCCTTTGCAACAGTAGATCAGTTGGAACCTGCTCAAATGCCACCGGCTACGTTTTCTGGGACGGTTTCCATCCAACTGAAGCTGCAAATCAAGTACTGGCTGGGGATTTACTTACTCAAGGATTCAGCCTCATCTGA | 1056 | 44.13 | MQLRVIGFLLPFILLALIFPVAITDPLVPALCIFGDSVVDVGNNNNLLTVVKANFPPYGRDFVTHTPTGRFCNGKLATDFTAENLGFSSYPPAYLSQDATGNKLLTGANFASAASGFYDGTAQLYHAVSLTQQLNYYKEYQSKVVNMVGTEKANAIFSGAIHLLSAGSSDFIQNYYVNPLLYRTYSPQQFSDILITSFSNFIQNLYGMGARRIGVTGLPPLGCLPAAITLFGSGSNQCIQRLNQDAIAFNTKLQSATSSLQNRFSDLKLVAFDIYQPLLNMVSKPAENGFFESRRACCGTGTVETSFLCNSRSVGTCSNATGYVFWDGFHPTEAANQVLAGDLLTQGFSLI | 351 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 8874028 | 8876591 | - | MELO3C024501.2.1 | Cme08g01245 | 335508 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme08g01245 | 351 | CDD | SGNH_plant_lipase_like | 29 | 345 | IPR035669 | - | |
| Cme08g01245 | 351 | Gene3D | SGNH hydrolase | 24 | 347 | IPR036514 | - | |
| Cme08g01245 | 351 | PANTHER | GDSL-MOTIF LIPASE | 9 | 350 | - | - | |
| Cme08g01245 | 351 | PANTHER | GDSL ESTERASE/LIPASE EXL3 | 9 | 350 | - | - | |
| Cme08g01245 | 351 | Pfam | GDSL-like Lipase/Acylhydrolase | 33 | 340 | IPR001087 | GO:0016788 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme04g01153 | Cme-Chr4:15733961 | Cme08g01245 | Cme-Chr8:8874028 | 8.75E-148 | dispersed | |
| Cme08g01245 | Cme-Chr8:8874028 | Cme01g02888 | Cme-Chr1:35582933 | 5.36E-118 | dispersed | |
| Cme01g01002 | Cme-Chr1:12041787 | Cme08g01245 | Cme-Chr8:8874028 | 8.52E-65 | transposed | |
| Cme02g00970 | Cme-Chr2:14191296 | Cme08g01245 | Cme-Chr8:8874028 | 1.30E-73 | transposed | |
| Cme05g01055 | Cme-Chr5:16018598 | Cme08g01245 | Cme-Chr8:8874028 | 4.88E-09 | transposed | |
| Cme08g00952 | Cme-Chr8:6271801 | Cme08g01245 | Cme-Chr8:8874028 | 1.35E-99 | transposed | |
| Cme06g02863 | Cme-Chr6:36069186 | Cme08g01245 | Cme-Chr8:8874028 | 4.62E-67 | transposed | |
| Cme11g01870 | Cme-Chr11:26874246 | Cme08g01245 | Cme-Chr8:8874028 | 8.18E-156 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme08g01245 | - | - | csv:101206148 | 665.996 |