Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme08g01268 | ATGCCGATCCGTAACATTGCAATTGGAAGGCCCGAAGAGGCTACTCATCCAGATGCTTTGAAGGCTGGATTGGCCGAGTTTATTTCCACCTTGATTTTTGTTTTTGCTGGCCAAGGTTCCGGCATAGCCTTTAGTAAGCTCACCAATGACGGCGCTGCCACTCCAGCCGGTCTCATCTCCGCCTCCATCGCCCATGCCTTTGCTCTTTTCGTTGCCGTCTCCGTTGGCGCTAACATCTCTGGTGGCCATGTTAACCCCGCCGTTACCTTTGGTGCCTTCGTTGGCGGTAACATCACCCTCCTACGTGGTATCATCTACTGGATTGCTCAACTCCTCGGATCCGTTGTCGCTTGCTTGCTCCTTAAATTCGTCACCGGCTTGCCCACCGGGAGCTTCGGTCTATCAGCAGGAGTTGGTGAACTAAACGCCTTCGTTTTCGAGATCGTGATGACATTCGGCTTGGTGTACACGGTGTACGCAACCGCAGTGGATCCCAAGAAGGGCAGTTTGGGAACAATTGCACCCATCGCAATCGGTTTCATCGTCGGAGCCAACATTTTGGCCGGCGGAGCATTCACCGGAGCCTCCATGAACCCCGCCGTGGCATTCGGCCCATCAGTCGTCAGCTGGTCATGGGAAAGCCACTGGGTCTACTGGGCCGGACCTTTGATCGGTGGTGGCCTTGCTGGTCTCATCTACGAATTCATCTTCATTTCCAACTCCCACGAGCAACTCCCAACCACCGACTACTAA | 753 | 54.32 | MPIRNIAIGRPEEATHPDALKAGLAEFISTLIFVFAGQGSGIAFSKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIIYWIAQLLGSVVACLLLKFVTGLPTGSFGLSAGVGELNAFVFEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILAGGAFTGASMNPAVAFGPSVVSWSWESHWVYWAGPLIGGGLAGLIYEFIFISNSHEQLPTTDY | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 9177803 | 9179736 | + | MELO3C024483.2.1 | Cme08g01268 | 335531 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme08g01268 | 250 | ProSitePatterns | MIP family signature. | 83 | 91 | IPR022357 | - | |
Cme08g01268 | 250 | Pfam | Major intrinsic protein | 14 | 233 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme08g01268 | 250 | PRINTS | Major intrinsic protein family signature | 21 | 40 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme08g01268 | 250 | PRINTS | Major intrinsic protein family signature | 65 | 89 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme08g01268 | 250 | PRINTS | Major intrinsic protein family signature | 102 | 121 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme08g01268 | 250 | PRINTS | Major intrinsic protein family signature | 146 | 164 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme08g01268 | 250 | PRINTS | Major intrinsic protein family signature | 179 | 201 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme08g01268 | 250 | PRINTS | Major intrinsic protein family signature | 216 | 236 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme08g01268 | 250 | PANTHER | AQUAPORIN TIP1-1 | 1 | 250 | - | - | |
Cme08g01268 | 250 | CDD | MIP | 21 | 236 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme08g01268 | 250 | PANTHER | AQUAPORIN-8 | 1 | 250 | IPR034294 | - | |
Cme08g01268 | 250 | SUPERFAMILY | Aquaporin-like | 13 | 245 | IPR023271 | - | |
Cme08g01268 | 250 | Gene3D | Glycerol uptake facilitator protein. | 4 | 250 | IPR023271 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cme04g02488 | Cme08g01268 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme08g01268 | Cme-Chr8:9177803 | Cme09g01523 | Cme-Chr9:20356405 | 1.94E-51 | dispersed | |
Cme01g02717 | Cme-Chr1:34410056 | Cme08g01268 | Cme-Chr8:9177803 | 1.74E-97 | transposed | |
Cme03g01738 | Cme-Chr3:25963205 | Cme08g01268 | Cme-Chr8:9177803 | 1.03E-80 | transposed | |
Cme06g00639 | Cme-Chr6:4121946 | Cme08g01268 | Cme-Chr8:9177803 | 5.42E-19 | transposed | |
Cme07g02009 | Cme-Chr7:25155942 | Cme08g01268 | Cme-Chr8:9177803 | 7.14E-24 | transposed | |
Cme09g00564 | Cme-Chr9:5803978 | Cme08g01268 | Cme-Chr8:9177803 | 5.82E-52 | transposed | |
Cme09g00565 | Cme-Chr9:5810542 | Cme08g01268 | Cme-Chr8:9177803 | 7.81E-61 | transposed | |
Cme09g01609 | Cme-Chr9:20879919 | Cme08g01268 | Cme-Chr8:9177803 | 9.53E-103 | transposed | |
Cme12g01777 | Cme-Chr12:24357524 | Cme08g01268 | Cme-Chr8:9177803 | 1.84E-101 | transposed | |
Cme04g02488 | Cme-Chr4:31313855 | Cme08g01268 | Cme-Chr8:9177803 | 5.88E-130 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme08g01268 | K09873 | - | csv:101204225 | 475.707 |