Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g01273 ATGGCCACCATTATAAAATCTTCAATTCAGTTCCCAAGATTCAGCATCGGAACTGGGCAAAGAAGACGATCGCAGATGTCGAATTTCGCCGTCCAAGTTCTATTGGGCCGATGGTTCACCGCCTTCGCTTCTTTACTCATCATGTCCGTTTCCGGTGCCTCCTACATGTTCGCACTTTACTCCTCCGACATCAAATCCTCCTTGAATTACGATCAGACCACTCTCAACCTCGTCGGCTTCTTTAAGGATCTGGGTTCCAACGTTGGAGTCTTTTCCGGTCTTATTAATGAAATTACCCCGCCTTGGGTTGTTCTCTTCATCGGTGGGGTAATGAATTTCTTTGGCTATTTCATGATTTGGCTGTCTGTCACTCACCGTATCTCCAAACCCAAATTGCCCGCGATGTGTTTGTTTATATTCCTAGGTGCAAATTCTCAGACATTTGCCAATACTGGGGCTTTGATACCTTCTGTGAAGAATTTCCCTCAGAATCGAGGTAATGTATTGGGTTTATTGAAAGGGTTTGTTGGGTTAAGTGGGGCAATCTTGACTCAGATTTATCATGCTTTTTATGGGGATGATTCGAAGGATTTTATCTTGCTTATTGCTTGGCTGCCTACTGCTGTTTCTTTACTGCTTCTTCGGATTGTTAGAGTAGTGGAAGTGAACCCAATATTCAAATCCAATGATCTGAAAAATTTCTATTCTATGCTCTACATTTCCCTTGGTCTGGCTGGCTTCCTCATGATTTTGATTATTATCCAAAACGAGCTCATGTTTACTAGAATTCAGTATTTGGTTTGTGTGTTTGTTCTTCTAGCGTTTCTTTTTCTTCCCCTTGTTGTTGTTATAAGAGAAGAATTCAGCATTAGGAAAAGGAAATTGCAAGGTGTGGATGTTACTTCTTGGCTTCCGGTTCCATCAGACCAATCTCCAGCTGAATTACCGTTGCCTAGACCTTCAAGTTTGCGAACGACTGACATAGCTTTAACCAACCCAAGTTCTTGCTTCGAAAACGTGTTCAGACCGCCGGAAAGAGGAGAGGACTACACCATTTTACAAGCAATCTTCAGTGTAGATATGTTGATTCTGTTTTTTACCACAATTTGTGGGGCTGGTGGGACTTTGACTGCAATCGACAACCTGGGTCAGATAGGCAGCTCCCTTGGCTACTCAACTCATACCATTTCTACTTTCACTTCTCTAGTGAGTATATGGGGCTTTCTCGGTCGAGCATTTTCGGGTTATGCTTCTGAATTCTTATGGACGAAGTATAACTTCTCTCGCCCTTTGTTCCTCACTTTTGTCCTTCTTCTCTCTTGCTTTGGCCATCTTCTAATTTCCTCTGGAGTCCCAACCTCCATTTATTTTGCTTCTGTGATCATTGGATTTTGCTTTGGAGCACAGTGGCCATTGATTTTCGCCATTGTTTCTGAATTATTTGGCTTGAAATACTATGCAACTTTATATAGCATTAGTGGAATTGCTAGCCCAATTGGTTCATACATTTTCAATGTGAAAGTAGCTGGCTATTTATACGACCAAGAGGCTAGAAAGCAAATAGGAGCGATCGGTCTTAGAAATGTAGCTGGTAGAGACTTAGCCTGCAAGGGCGTCCATTGTTACAGATTAGCTTTTCTCATTATCTCTGCTTCAACCATGTTCGGTTGTTTTGTTTCATTCATTTTGGTGCTCCGAACTTGGAAATTCTACAAGGGTGATATCTACAAGAAGTTTAGAGATGAAAGAAAGGAATCAAAGTAA 1764 41.72 MATIIKSSIQFPRFSIGTGQRRRSQMSNFAVQVLLGRWFTAFASLLIMSVSGASYMFALYSSDIKSSLNYDQTTLNLVGFFKDLGSNVGVFSGLINEITPPWVVLFIGGVMNFFGYFMIWLSVTHRISKPKLPAMCLFIFLGANSQTFANTGALIPSVKNFPQNRGNVLGLLKGFVGLSGAILTQIYHAFYGDDSKDFILLIAWLPTAVSLLLLRIVRVVEVNPIFKSNDLKNFYSMLYISLGLAGFLMILIIIQNELMFTRIQYLVCVFVLLAFLFLPLVVVIREEFSIRKRKLQGVDVTSWLPVPSDQSPAELPLPRPSSLRTTDIALTNPSSCFENVFRPPERGEDYTILQAIFSVDMLILFFTTICGAGGTLTAIDNLGQIGSSLGYSTHTISTFTSLVSIWGFLGRAFSGYASEFLWTKYNFSRPLFLTFVLLLSCFGHLLISSGVPTSIYFASVIIGFCFGAQWPLIFAIVSELFGLKYYATLYSISGIASPIGSYIFNVKVAGYLYDQEARKQIGAIGLRNVAGRDLACKGVHCYRLAFLIISASTMFGCFVSFILVLRTWKFYKGDIYKKFRDERKESK 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9204775 9206538 + MELO3C024479.2.1 Cme08g01273 335536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g01273 587 Pfam Nodulin-like 37 284 IPR010658 -
Cme08g01273 587 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 21 585 - -
Cme08g01273 587 Gene3D MFS general substrate transporter like domains 351 570 IPR036259 -
Cme08g01273 587 PANTHER MFS TRANSPORTER 21 585 - -
Cme08g01273 587 SUPERFAMILY MFS general substrate transporter 38 573 IPR036259 -
Cme08g01273 587 CDD MFS_Mch1p_like 36 557 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01913 Cme-Chr2:25569274 Cme08g01273 Cme-Chr8:9204775 4.34E-118 dispersed
Cme02g01914 Cme-Chr2:25572403 Cme08g01273 Cme-Chr8:9204775 2.15E-114 dispersed
Cme08g01273 Cme-Chr8:9204775 Cme10g00102 Cme-Chr10:714269 0 dispersed
Cme10g00104 Cme-Chr10:721428 Cme08g01273 Cme-Chr8:9204775 1.42E-29 dispersed
Cme04g02495 Cme-Chr4:31343385 Cme08g01273 Cme-Chr8:9204775 2.39E-17 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g01273 - - csv:101203981 1077.39