Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g01406 ATGGGAATTTGCCAGGCGAAGGTGATCGCAAACCCAAAGGCGAAATGCGAGGAGGACAATACCGATTCACAAACAAGAAATCCCACTCCCAATTTGCCGTTCTTCACTCCGAGTCCTCTGTCGAGCGTCTTCAAGAACTCGCCGTCAGTGGGTACAAAGCGCCGTTCGCGTTCCCGTTCCCGGCCGTTTCCGCCGCCGTCACCGGCAAAGCACATCAAGGAACTGCTGGCTCGACGCCATGGGTCCGGTAAGCCGAATCAAGTGGCGATTCCAGAAAACGAGGAGGGGGAGGGGGAGGTAGTGGAGGTGAATAGAGAATTTGGATATTCGAAGCAATTTGTGGGGAATTATGAGATTGGCGAAGAAGTAGGGCGCGGCCATTTTGGGTTCACTTGCAAAGCTAAAGCCAAGAAGGGAAGTCTCAAGGGTCGGAATGTTGCCGTGAAGATCATCGCTAAAGCCAAGATGACAACAACGATAGCGGTCGAAGATGTGAAAAGAGAAGTTAAAATATTGCAGGCTTTGAATGGACACAAGAACTTAGTGCAGTTCCATGGAGCGTTTGAAGACGATATTAATGTTTTCATGTTCTTCAGGTTATGCGAAGGAGGCGAACTACTCGATCGGATGCTTTTGAGAGGTGGAATGTACTCAGAAGAAGATGCTAAGACGGTCTTAGTTCAGGTTTTAAGCGCGATCGCCTTCTGTCATCTCCAAGGCATCGTCCACCGTGATCTCAAGCCAGAGAATTTTCTTTTCACAACAAAGGAGGAAGATTCAACACTAAAGGTTATTGATTTCGGACTCTCAGATTATGTAAATCCAGATGAGAAACTGAATGATATAGTTGGCAGTGCATATTATGTAGCTCCTGAAGTCCTGCAGAGATCATACGGGACCGAAGCGGACATGTGGAGTATCGGTGTTATTGCGTATATTCTTTTATGTGGAAGCAGACCTTTCTGGGACAGGACCGAATCTGGTATATTTCGAACCGTGTTAAGGGAAGATCCAAGCTTTGACGATGAACCTTGGCCATCTTTATCTCCTGATGCAAAAGACTTTGTCCAAAGATTACTGCATAAAGACCAACATAAAAGACTAACTGCTGCTCAGGCTTTGTGTCATCCTTGGTTGACAAATCATCCTAATGTCAAGATTCCATTGGATATGATAGTTTATAAGCTCGTTAGAGCGTATATCTACTCATCATCTTTGCGTAAATTAGCATTAAATGCTCTTGCAAAGACATTATCCTTCGTGCAGCTTGCTTATCTTCGAGAACAATTTGATCTCTTAGGTCCGAACAAAAACGGGTTCATTTCTTTGCAGAACTTTAAGATGGCTTTGATGAAAGCTTCAACTGATGCAATGAACGATTCAGGGGTGATAGAATATGTCGACATGGTGAGTTCCTCACAATATAGAAGGTTAGATTTTGAAGAATTTTGTGCAGCTGCCATAAGCGTGCATCAGTTAAAAGGCATGGACAGTTGGGAGCAACATGCAAGATATGCTTATGATCTATTTGAAGAGTATGGAAACAGAACAATTATGATAGAGGAACTTGCCTCAGAACTAGGATTGGCACCATCTGTCCCACTTCAAGTAGTTCTTCAAGAATGGATAAGACCCTCAGATGGCAAACTTAGTTTTATGGGATTCATTAAACTTTTGAATGGAGTCCCCCCAAGTACAAACAAGAAGACTTGA 1713 44.02 MGICQAKVIANPKAKCEEDNTDSQTRNPTPNLPFFTPSPLSSVFKNSPSVGTKRRSRSRSRPFPPPSPAKHIKELLARRHGSGKPNQVAIPENEEGEGEVVEVNREFGYSKQFVGNYEIGEEVGRGHFGFTCKAKAKKGSLKGRNVAVKIIAKAKMTTTIAVEDVKREVKILQALNGHKNLVQFHGAFEDDINVFMFFRLCEGGELLDRMLLRGGMYSEEDAKTVLVQVLSAIAFCHLQGIVHRDLKPENFLFTTKEEDSTLKVIDFGLSDYVNPDEKLNDIVGSAYYVAPEVLQRSYGTEADMWSIGVIAYILLCGSRPFWDRTESGIFRTVLREDPSFDDEPWPSLSPDAKDFVQRLLHKDQHKRLTAAQALCHPWLTNHPNVKIPLDMIVYKLVRAYIYSSSLRKLALNALAKTLSFVQLAYLREQFDLLGPNKNGFISLQNFKMALMKASTDAMNDSGVIEYVDMVSSSQYRRLDFEEFCAAAISVHQLKGMDSWEQHARYAYDLFEEYGNRTIMIEELASELGLAPSVPLQVVLQEWIRPSDGKLSFMGFIKLLNGVPPSTNKKT 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12085103 12091143 - MELO3C019099.2.1 Cme08g01406 335669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g01406 570 SMART serkin_6 117 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme08g01406 570 SUPERFAMILY Protein kinase-like (PK-like) 111 407 IPR011009 -
Cme08g01406 570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Cme08g01406 570 CDD STKc_CAMK 116 378 - -
Cme08g01406 570 Pfam Protein kinase domain 117 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme08g01406 570 ProSiteProfiles Protein kinase domain profile. 117 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme08g01406 570 MobiDBLite consensus disorder prediction 10 97 - -
Cme08g01406 570 Gene3D Phosphorylase Kinase; domain 1 109 206 - -
Cme08g01406 570 ProSiteProfiles EF-hand calcium-binding domain profile. 421 456 IPR002048 GO:0005509
Cme08g01406 570 Gene3D Transferase(Phosphotransferase) domain 1 207 392 - -
Cme08g01406 570 Gene3D - 399 561 - -
Cme08g01406 570 PANTHER CDPK-RELATED KINASE 7 39 564 - -
Cme08g01406 570 ProSitePatterns Protein kinases ATP-binding region signature. 123 153 IPR017441 GO:0005524
Cme08g01406 570 PANTHER SERINE/THREONINE-PROTEIN KINASE 39 564 - -
Cme08g01406 570 MobiDBLite consensus disorder prediction 23 51 - -
Cme08g01406 570 SUPERFAMILY EF-hand 407 560 IPR011992 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g01406 Cme-Chr8:12085103 Cme11g00245 Cme-Chr11:2783013 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65096 PF00069 Pkinase 1.50E-69 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g01406 - - csv:101218622 1057.74