Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme08g01425 | ATGGCTTCAAGACCAATCGTTCCCCAACAAATCAGAGGTGAGGCAGTGATCGGCGGAGGAAAACAAGCAAAGGGCGTGGCTGGAGCAGAGGCAAAGAACCGCCGTGCACTGGGTGATATCGGGAATTTGGTAACTGTTCGAGGAATTGACGCAAAGGCAAATCGCCCTATTACGAGGAGTTTCTGTGCTCAGTTGCTTGCCAATGCTCAAGCTGCTGCAAAGGCTGAAAACAACAAGAAACAAGTGCCTGTTAGTATAGATGGGGCTGCTCCCATTCTTGATACTGGTGTTGTGGTTGTAAAGAAAGCAGGAGGTCCCAAGCCAGCTCCTAAGAAAGTCATTATAAAACCAACATCGGAGGTTATTGATATAAGTCCTGACACTGTGGAAAAAGTTGAAAAGAAGGAAGTCAAATGTGCAAACAAGAAAAAGGAAGGAGAAGGGCCCTCAAAGAAGAAAGCACAGACTCTTACTTCAGTCTTGACTGCTAGAAGCAAGGCTGCCTGTGGTATAACCAAGAAACCTAAAGAACAGATTTTTGATATTGATGCTGCAGATGTTGGTAATGAGTTGGCAGCTGTTGAATATGTTGAGGATATCTACACCTTCTATAAAGAAGCTGAGAACGAGAGCAGACCTCATGATTATATGGATTCACAACCTGAGATAAACCCTTCAATGAGGGCTATTTTGGTGGATTGGCTGGTTGATGTCCACAACAAATTTGAACTTTCGCCGGAAACTTTCTACCTCACGATCAATATAATCGATCGATTCCTTGCGACAAAGATTGTTCCAAGAAGGGAATTGCAATTACTGGGCATTGGAGCGATGCTTATAGCCTCCAAGTATGAAGAAATTTGGGCGCCAGAGGTAAATGACTTTGTGTGCCTTTCGGATAGAGCTTACACTCATCAACAGATTCTAGTGATGGAGAAGAAGATACTTGGCAAGTTGGAGTGGACCTTGACTGTTCCCACACCATATGTTTTCCTTGCTCGATTTATCAAGGCATCCAAGGACTCGAACCACGAGATGGAAAATCTGGTTTATTTTTTGGCTGAACTTGGAATAATGCATTACAATACGGCAATGATGTATTGCCCGTCGATGATTGCTGCCTCAGCAGTCTACGCCGCTCGATGCACGCTGAAGAAAACACCTGCTTGGGATGAAACCCTAAAGAAGCACACCGGTTTCTCGGAACCGCAGTTAATTGATTGTGCAAAGCTTTTGGTGGGGTTCCATGGGGTAGCAGACAAGAACAAACTTCAAGTAATATACCGAAAATACTCGAGTTCGGAGCGAGGAGCGGTAGCGTTGATTCAGCCAGCCAAAGCTTTGTTGGCTCTAGGCAGTGTCCATTGA | 1368 | 44.88 | MASRPIVPQQIRGEAVIGGGKQAKGVAGAEAKNRRALGDIGNLVTVRGIDAKANRPITRSFCAQLLANAQAAAKAENNKKQVPVSIDGAAPILDTGVVVVKKAGGPKPAPKKVIIKPTSEVIDISPDTVEKVEKKEVKCANKKKEGEGPSKKKAQTLTSVLTARSKAACGITKKPKEQIFDIDAADVGNELAAVEYVEDIYTFYKEAENESRPHDYMDSQPEINPSMRAILVDWLVDVHNKFELSPETFYLTINIIDRFLATKIVPRRELQLLGIGAMLIASKYEEIWAPEVNDFVCLSDRAYTHQQILVMEKKILGKLEWTLTVPTPYVFLARFIKASKDSNHEMENLVYFLAELGIMHYNTAMMYCPSMIAASAVYAARCTLKKTPAWDETLKKHTGFSEPQLIDCAKLLVGFHGVADKNKLQVIYRKYSSSERGAVALIQPAKALLALGSVH | 455 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 12648898 | 12651559 | + | MELO3C019115.2.1 | Cme08g01425 | 335688 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme08g01425 | 455 | PANTHER | CYCLINS | 21 | 450 | IPR039361 | - | |
Cme08g01425 | 455 | CDD | CYCLIN | 324 | 413 | IPR013763 | - | |
Cme08g01425 | 455 | PIRSF | Cyclin_A_B_D_E | 1 | 454 | IPR039361 | - | |
Cme08g01425 | 455 | CDD | CYCLIN | 227 | 316 | IPR013763 | - | |
Cme08g01425 | 455 | ProSitePatterns | Cyclins signature. | 228 | 259 | IPR006671 | - | |
Cme08g01425 | 455 | SMART | Cyclin_C_2 | 326 | 445 | IPR004367 | - | |
Cme08g01425 | 455 | Pfam | Cyclin, N-terminal domain | 199 | 323 | IPR006671 | - | |
Cme08g01425 | 455 | SUPERFAMILY | Cyclin-like | 327 | 447 | IPR036915 | - | |
Cme08g01425 | 455 | Pfam | Cyclin, C-terminal domain | 326 | 444 | IPR004367 | - | |
Cme08g01425 | 455 | Gene3D | - | 213 | 324 | - | - | |
Cme08g01425 | 455 | Gene3D | - | 199 | 441 | - | - | |
Cme08g01425 | 455 | SMART | cyclin_7 | 330 | 414 | IPR013763 | - | |
Cme08g01425 | 455 | SMART | cyclin_7 | 233 | 317 | IPR013763 | - | |
Cme08g01425 | 455 | SUPERFAMILY | Cyclin-like | 188 | 323 | IPR036915 | - | |
Cme08g01425 | 455 | PANTHER | G2/MITOTIC-SPECIFIC CYCLIN S13-6 | 21 | 450 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g01500 | Cme-Chr1:19726006 | Cme08g01425 | Cme-Chr8:12648898 | 1.14E-73 | dispersed | |
Cme05g00225 | Cme-Chr5:1579347 | Cme08g01425 | Cme-Chr8:12648898 | 9.61E-98 | dispersed | |
Cme08g00990 | Cme-Chr8:6469717 | Cme08g01425 | Cme-Chr8:12648898 | 2.96E-83 | dispersed | |
Cme08g01425 | Cme-Chr8:12648898 | Cme07g00308 | Cme-Chr7:1981391 | 2.79E-47 | dispersed | |
Cme08g01425 | Cme-Chr8:12648898 | Cme04g00381 | Cme-Chr4:3058212 | 7.93E-54 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme08g01425 | K21777 | - | csv:101217210 | 794.653 |