Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g01439 ATGGAAGGAAAGGGAAGCGGAATTGCCAATTTTGTTGAGGGAGCACAACCTTACATCGCTATGATCTCTCTCCAATTTGGCTATGCTGGGATGAATATCGTCACCAAGGTAGCTCTCAACCGCGGAATGAGCCATTACGTTCTTGTCACCTATCGACAAGCCTTTGCCACCATCGCCCTTGCTCCGTTCGCCTTCTTCCTCGAAAGAAAAGTGAGGCCCAAGATTAGTTTCACAATGTTAATGCAGATTTTCCTTCTGGGCTTCTTAGGGCCAGTGATTGATCAAAATTTCTATTATGCTGGATTGAAGCTCACTTCAACTACCTTTTCATGTGCTACGAGCAATATGCTTCCTGCAATGACATTCATTTTGGCTCTTCTTTGTAGGATGGAGAAATTGGAGATGAAGAAAGTGAGGTGCCAAGCCAAGGTGGTGGGAACATTGGTGACAGTGGGTGGAGCCATTTTGATGACTTTATACAAAGGGAATGTCATAAGCTTCTTTTGGTCTCACCATAACAATAATTATGATCTTCAAAGCTCTTCTGCTTCTTCCAATTACTATTCCTTTGAAAGCACCAATCAAGATTGGCTCAAGGGTTCCATTCTTCTCCTTTTTGCCAATCTTGCTTGGGCTTTGTTCTTCATCATTCAGAATGGAGGAACCGTACCTCTCGTCTCGATGTTGATAATACAAGATATAACAGTAGTTAATCGGATGGAATTGATATATTTGTGGTATGGTCTTACTATTTCACAGGCAATAACATTAAGGAATTACACAGCCCATCTCTCACTTACAACCCTTGTGTGTTTCTTTGGGACTTTGCAATCCATGGCTGTCACATTTGTAATGGAACACCAAACTTCTGTTTGGAACATTGGATGGGATATGAATCTTCTTGCTTCTGTTTATGCTGGAATAGTTTCATCAAGCATAGCATATTATGTACAAGGGATGATTATGCGAAAGAGAGGACCTGTTTTTGTCACGGCCTTTACCCCTATGATCATGATCATTGTTGCCATTATGGGCTCCTTCATGCTTGCTGAGAAGATCTATATCGGACGTGTTGTTGGAGGTATTGTAATGGTGGTGGGGCTATACTCAGTGCTATGGGGAAAATACAAAGATTACAAAGAAAAGGAAGCAATAATAGAAGAGACCACCATAGTTGAACCAGTGAAGCTTTTAATAAGTGTAGACAAATTCGAGAAAAATAAGAAGAAGAAATTAGCAACAGTAGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAACGACGACATCGACAGCATTAAACGACATCGAAATGCAAAGGAACGACACAACATCAAATGTCGACGACAATAATAATAATGTTGCAAAATTGCCTCGTCTTTCTCCACTACCCATTCTTGTTGTTATAGCTATGGATGAAGCAACACCAAAAGATTCTGATTAA 1440 40.42 MEGKGSGIANFVEGAQPYIAMISLQFGYAGMNIVTKVALNRGMSHYVLVTYRQAFATIALAPFAFFLERKVRPKISFTMLMQIFLLGFLGPVIDQNFYYAGLKLTSTTFSCATSNMLPAMTFILALLCRMEKLEMKKVRCQAKVVGTLVTVGGAILMTLYKGNVISFFWSHHNNNYDLQSSSASSNYYSFESTNQDWLKGSILLLFANLAWALFFIIQNGGTVPLVSMLIIQDITVVNRMELIYLWYGLTISQAITLRNYTAHLSLTTLVCFFGTLQSMAVTFVMEHQTSVWNIGWDMNLLASVYAGIVSSSIAYYVQGMIMRKRGPVFVTAFTPMIMIIVAIMGSFMLAEKIYIGRVVGGIVMVVGLYSVLWGKYKDYKEKEAIIEETTIVEPVKLLISVDKFEKNKKKKLATVVEEEEEEEEETTTSTALNDIEMQRNDTTSNVDDNNNNVAKLPRLSPLPILVVIAMDEATPKDSD 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12876104 12880879 + MELO3C019125.2.1 Cme08g01439 335702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g01439 479 PANTHER WAT1-RELATED PROTEIN 12 219 IPR030184 GO:0016021|GO:0022857
Cme08g01439 479 PANTHER WAT1-RELATED PROTEIN 244 397 IPR030184 GO:0016021|GO:0022857
Cme08g01439 479 Pfam EamA-like transporter family 18 157 IPR000620 GO:0016020|GO:0016021
Cme08g01439 479 Pfam EamA-like transporter family 250 372 IPR000620 GO:0016020|GO:0016021
Cme08g01439 479 PANTHER WAT1-RELATED PROTEIN 12 219 - -
Cme08g01439 479 PANTHER WAT1-RELATED PROTEIN 244 397 - -
Cme08g01439 479 Coils Coil 401 425 - -
Cme08g01439 479 MobiDBLite consensus disorder prediction 430 452 - -
Cme08g01439 479 MobiDBLite consensus disorder prediction 419 452 - -
Cme08g01439 479 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme04g02125 Cme08g01439 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g01439 Cme-Chr8:12876104 Cme10g00733 Cme-Chr10:4653085 1.20E-156 dispersed
Cme09g01897 Cme-Chr9:23094473 Cme08g01439 Cme-Chr8:12876104 3.29E-13 dispersed
Cme08g01439 Cme-Chr8:12876104 Cme08g02377 Cme-Chr8:30644568 1.90E-101 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g01439 - - cmo:103495845 803.512