Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme08g01481 ATGGACTTCTTACAGTCTTTGGATCCTCAAATCCTTCTGGGTCTCGCTGTGGCTGTTTTAGCCCTTGCCGTTGGTGCTCTCTATGTATTATCCTCCTCCAAAAAAAGCAAATCTAGAGGTTGCTTGGATCCAGAGATTTTCAAGGAGTTTAAACTTATCAAGCGTCTGCAACTGAGCCATAATGTGGCGAAATTTACATTTACACTCCCTAATCCTACTTCAGTTCTGGGTCTTCCTATTGGACAACATATAAGTTGCAGGGGAAAGGATGGCCAAGGTGAAGAAGTTATCAAACCATACACGCCTATTACTTTGGATTCTGATGTTGGATATTTTGAATTGGTCATAAAGATGTATCCCCAAGGAAGGATGTCACACCATTTCCGACAGATGCGTGTAGGAGATTTTCTTGCTGTAAAGGGTCCCAAGGGACGTTTCAGATATCAACCTGGCCAGGTCAGAGCATTTGGTATGCTTGCTGGAGGCTCGGGCATTACTCCTATGTATCAAGTTGCTCGGGCGATTTTAGAAAATCCAAACGACAAGACAAAGGTACATCTCATTTATGCCAACGTCACCTATGAGGACATTCTCTTAAAGGAGGAGTTGGACCTTCTTGCCAAAAGGTACCCAGATAGCTTCAAGCTCTATTATGTCTTAAACCAGCCTCCTGAAGTGTGGGATGGCGGCGTTGGATTCGTATCGAAGGAGATGATTCAAACCCACTGCCCTGCTCCTGCTTCTGATATTCAGATTTTAAGATGTGGGCCACCACCAATGAACAAGGCCATGGCTGCTCATCTTGAAGAACTTGGATATGCACCTGAGATGCTGTTCATGTTCTGA 846 44.44 MDFLQSLDPQILLGLAVAVLALAVGALYVLSSSKKSKSRGCLDPEIFKEFKLIKRLQLSHNVAKFTFTLPNPTSVLGLPIGQHISCRGKDGQGEEVIKPYTPITLDSDVGYFELVIKMYPQGRMSHHFRQMRVGDFLAVKGPKGRFRYQPGQVRAFGMLAGGSGITPMYQVARAILENPNDKTKVHLIYANVTYEDILLKEELDLLAKRYPDSFKLYYVLNQPPEVWDGGVGFVSKEMIQTHCPAPASDIQILRCGPPPMNKAMAAHLEELGYAPEMLFMF 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13612767 13619044 - MELO3C019165.2.1 Cme08g01481 335744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme08g01481 281 Gene3D - 140 281 IPR039261 -
Cme08g01481 281 SUPERFAMILY Riboflavin synthase domain-like 42 150 IPR017938 -
Cme08g01481 281 Pfam Oxidoreductase FAD-binding domain 50 148 IPR008333 -
Cme08g01481 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 281 - -
Cme08g01481 281 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 137 278 IPR039261 -
Cme08g01481 281 CDD cyt_b5_reduct_like 50 281 - -
Cme08g01481 281 Pfam Oxidoreductase NAD-binding domain 158 264 IPR001433 GO:0016491
Cme08g01481 281 PRINTS Cytochrome B5 reductase signature 76 87 - -
Cme08g01481 281 PRINTS Cytochrome B5 reductase signature 98 105 - -
Cme08g01481 281 PRINTS Cytochrome B5 reductase signature 134 148 - -
Cme08g01481 281 PRINTS Cytochrome B5 reductase signature 157 176 - -
Cme08g01481 281 PRINTS Cytochrome B5 reductase signature 195 206 - -
Cme08g01481 281 PRINTS Cytochrome B5 reductase signature 251 259 - -
Cme08g01481 281 Gene3D Translation factors 40 139 - -
Cme08g01481 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 281 IPR001834 GO:0016491
Cme08g01481 281 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 45 149 IPR017927 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme04g02153 Cme08g01481 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02153 Cme-Chr4:28819749 Cme08g01481 Cme-Chr8:13612767 1.18E-161 dispersed
Cme05g00031 Cme-Chr5:243873 Cme08g01481 Cme-Chr8:13612767 1.48E-145 dispersed
Cme05g01933 Cme-Chr5:27950859 Cme08g01481 Cme-Chr8:13612767 1.63E-67 dispersed
Cme08g01481 Cme-Chr8:13612767 Cme09g00850 Cme-Chr9:11283247 5.94E-49 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme08g01481 K00326 - csv:101212569 523.472